Strain Fitness in Escherichia coli ECRC100 around OKFHMN_01265

Experiment: EV146

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntydeN and ydeM are separated by 51 nucleotidesydeM and yddA are separated by 317 nucleotides OKFHMN_01260: ydeN - Uncharacterized sulfatase YdeN, at 147,288 to 148,970 ydeN OKFHMN_01265: ydeM - anaerobic sulfatase maturase, at 149,022 to 150,179 ydeM OKFHMN_01270: yddA - Inner membrane ABC transporter ATP-binding protein YddA, at 150,497 to 152,155 yddA Position (kb) 149 150 151Strain fitness (log2 ratio) -1 0 1at 149.979 kb on + strand, within ydeMat 151.145 kb on - strand, within yddA

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Per-strain Table

Position Strand Gene LocusTag Fraction EV146
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149,979 + ydeM OKFHMN_01265 0.83 -0.3
151,145 - yddA OKFHMN_01270 0.39 -0.6

Or see this region's nucleotide sequence