Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02551 and OHPLBJKB_02552 are separated by 79 nucleotides OHPLBJKB_02552 and OHPLBJKB_02553 are separated by 146 nucleotides
OHPLBJKB_02551: OHPLBJKB_02551 - Inner membrane protein YcfT, at 2,663,773 to 2,664,846
_02551
OHPLBJKB_02552: OHPLBJKB_02552 - Transcription-repair-coupling factor, at 2,664,926 to 2,668,420
_02552
OHPLBJKB_02553: OHPLBJKB_02553 - putative L,D-transpeptidase YcfS, at 2,668,567 to 2,669,526
_02553
Position (kb)
2664
2665
2666
2667
2668
2669 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2663.989 kb on + strand, within OHPLBJKB_02551 at 2663.989 kb on + strand, within OHPLBJKB_02551 at 2664.002 kb on + strand, within OHPLBJKB_02551 at 2664.125 kb on + strand, within OHPLBJKB_02551 at 2664.126 kb on - strand, within OHPLBJKB_02551 at 2664.126 kb on - strand, within OHPLBJKB_02551 at 2664.148 kb on + strand, within OHPLBJKB_02551 at 2664.148 kb on + strand, within OHPLBJKB_02551 at 2664.214 kb on + strand, within OHPLBJKB_02551 at 2664.221 kb on + strand, within OHPLBJKB_02551 at 2664.230 kb on - strand, within OHPLBJKB_02551 at 2664.269 kb on + strand, within OHPLBJKB_02551 at 2664.272 kb on + strand, within OHPLBJKB_02551 at 2664.272 kb on + strand, within OHPLBJKB_02551 at 2664.272 kb on + strand, within OHPLBJKB_02551 at 2664.287 kb on + strand, within OHPLBJKB_02551 at 2664.364 kb on + strand, within OHPLBJKB_02551 at 2664.365 kb on - strand, within OHPLBJKB_02551 at 2664.396 kb on - strand, within OHPLBJKB_02551 at 2664.396 kb on - strand, within OHPLBJKB_02551 at 2664.437 kb on + strand, within OHPLBJKB_02551 at 2664.483 kb on + strand, within OHPLBJKB_02551 at 2664.487 kb on - strand, within OHPLBJKB_02551 at 2664.545 kb on - strand, within OHPLBJKB_02551 at 2664.609 kb on + strand, within OHPLBJKB_02551 at 2664.609 kb on + strand, within OHPLBJKB_02551 at 2664.610 kb on - strand, within OHPLBJKB_02551 at 2664.613 kb on + strand, within OHPLBJKB_02551 at 2664.613 kb on + strand, within OHPLBJKB_02551 at 2664.613 kb on + strand, within OHPLBJKB_02551 at 2664.614 kb on - strand, within OHPLBJKB_02551 at 2664.614 kb on - strand, within OHPLBJKB_02551 at 2664.614 kb on - strand, within OHPLBJKB_02551 at 2664.614 kb on - strand, within OHPLBJKB_02551 at 2664.641 kb on + strand, within OHPLBJKB_02551 at 2664.651 kb on - strand, within OHPLBJKB_02551 at 2664.744 kb on + strand at 2664.745 kb on - strand at 2664.745 kb on - strand at 2664.745 kb on - strand at 2664.879 kb on + strand at 2664.917 kb on - strand at 2664.925 kb on + strand at 2664.926 kb on - strand at 2664.926 kb on - strand at 2664.926 kb on - strand at 2664.926 kb on - strand at 2664.935 kb on + strand at 2664.935 kb on + strand at 2664.947 kb on + strand at 2664.948 kb on - strand at 2664.993 kb on - strand at 2664.994 kb on + strand at 2664.994 kb on + strand at 2664.994 kb on + strand at 2665.117 kb on + strand at 2665.234 kb on + strand at 2665.235 kb on - strand at 2665.267 kb on - strand at 2665.306 kb on + strand, within OHPLBJKB_02552 at 2665.312 kb on + strand, within OHPLBJKB_02552 at 2665.590 kb on + strand, within OHPLBJKB_02552 at 2665.591 kb on - strand, within OHPLBJKB_02552 at 2665.591 kb on - strand, within OHPLBJKB_02552 at 2665.702 kb on + strand, within OHPLBJKB_02552 at 2665.702 kb on + strand, within OHPLBJKB_02552 at 2665.702 kb on + strand, within OHPLBJKB_02552 at 2665.702 kb on + strand, within OHPLBJKB_02552 at 2665.703 kb on - strand, within OHPLBJKB_02552 at 2665.703 kb on - strand, within OHPLBJKB_02552 at 2665.703 kb on - strand, within OHPLBJKB_02552 at 2665.703 kb on - strand, within OHPLBJKB_02552 at 2665.703 kb on - strand, within OHPLBJKB_02552 at 2665.703 kb on - strand, within OHPLBJKB_02552 at 2665.703 kb on - strand, within OHPLBJKB_02552 at 2665.703 kb on - strand, within OHPLBJKB_02552 at 2665.706 kb on + strand, within OHPLBJKB_02552 at 2665.720 kb on + strand, within OHPLBJKB_02552 at 2665.731 kb on + strand, within OHPLBJKB_02552 at 2665.731 kb on + strand, within OHPLBJKB_02552 at 2665.732 kb on - strand, within OHPLBJKB_02552 at 2665.797 kb on - strand, within OHPLBJKB_02552 at 2665.810 kb on + strand, within OHPLBJKB_02552 at 2665.989 kb on + strand, within OHPLBJKB_02552 at 2665.989 kb on + strand, within OHPLBJKB_02552 at 2666.031 kb on + strand, within OHPLBJKB_02552 at 2666.031 kb on + strand, within OHPLBJKB_02552 at 2666.032 kb on - strand, within OHPLBJKB_02552 at 2666.099 kb on - strand, within OHPLBJKB_02552 at 2666.189 kb on - strand, within OHPLBJKB_02552 at 2666.209 kb on + strand, within OHPLBJKB_02552 at 2666.210 kb on - strand, within OHPLBJKB_02552 at 2666.291 kb on - strand, within OHPLBJKB_02552 at 2666.291 kb on - strand, within OHPLBJKB_02552 at 2666.531 kb on + strand, within OHPLBJKB_02552 at 2666.531 kb on + strand, within OHPLBJKB_02552 at 2666.531 kb on + strand, within OHPLBJKB_02552 at 2666.531 kb on + strand, within OHPLBJKB_02552 at 2666.532 kb on - strand, within OHPLBJKB_02552 at 2666.532 kb on - strand, within OHPLBJKB_02552 at 2666.532 kb on - strand, within OHPLBJKB_02552 at 2666.532 kb on - strand, within OHPLBJKB_02552 at 2666.683 kb on + strand, within OHPLBJKB_02552 at 2666.683 kb on + strand, within OHPLBJKB_02552 at 2666.687 kb on + strand, within OHPLBJKB_02552 at 2666.688 kb on - strand, within OHPLBJKB_02552 at 2666.688 kb on - strand, within OHPLBJKB_02552 at 2666.742 kb on - strand, within OHPLBJKB_02552 at 2666.808 kb on + strand, within OHPLBJKB_02552 at 2666.813 kb on - strand, within OHPLBJKB_02552 at 2666.872 kb on + strand, within OHPLBJKB_02552 at 2666.910 kb on + strand, within OHPLBJKB_02552 at 2666.910 kb on + strand, within OHPLBJKB_02552 at 2666.911 kb on - strand, within OHPLBJKB_02552 at 2666.911 kb on - strand, within OHPLBJKB_02552 at 2666.970 kb on - strand, within OHPLBJKB_02552 at 2667.142 kb on - strand, within OHPLBJKB_02552 at 2667.187 kb on + strand, within OHPLBJKB_02552 at 2667.199 kb on + strand, within OHPLBJKB_02552 at 2667.350 kb on + strand, within OHPLBJKB_02552 at 2667.351 kb on - strand, within OHPLBJKB_02552 at 2667.411 kb on - strand, within OHPLBJKB_02552 at 2667.414 kb on - strand, within OHPLBJKB_02552 at 2667.419 kb on + strand, within OHPLBJKB_02552 at 2667.419 kb on + strand, within OHPLBJKB_02552 at 2667.419 kb on + strand, within OHPLBJKB_02552 at 2667.574 kb on + strand, within OHPLBJKB_02552 at 2667.575 kb on - strand, within OHPLBJKB_02552 at 2667.704 kb on + strand, within OHPLBJKB_02552 at 2667.705 kb on - strand, within OHPLBJKB_02552 at 2667.896 kb on + strand, within OHPLBJKB_02552 at 2667.896 kb on + strand, within OHPLBJKB_02552 at 2667.896 kb on + strand, within OHPLBJKB_02552 at 2667.896 kb on + strand, within OHPLBJKB_02552 at 2667.896 kb on + strand, within OHPLBJKB_02552 at 2667.897 kb on - strand, within OHPLBJKB_02552 at 2667.897 kb on - strand, within OHPLBJKB_02552 at 2667.897 kb on - strand, within OHPLBJKB_02552 at 2667.898 kb on + strand, within OHPLBJKB_02552 at 2667.898 kb on + strand, within OHPLBJKB_02552 at 2668.060 kb on + strand, within OHPLBJKB_02552 at 2668.061 kb on - strand, within OHPLBJKB_02552 at 2668.061 kb on - strand, within OHPLBJKB_02552 at 2668.424 kb on + strand at 2668.462 kb on + strand at 2668.511 kb on - strand at 2668.521 kb on + strand at 2668.522 kb on - strand at 2668.605 kb on + strand at 2668.775 kb on + strand, within OHPLBJKB_02553 at 2668.776 kb on - strand, within OHPLBJKB_02553 at 2668.801 kb on + strand, within OHPLBJKB_02553 at 2668.827 kb on - strand, within OHPLBJKB_02553 at 2668.885 kb on - strand, within OHPLBJKB_02553 at 2668.903 kb on + strand, within OHPLBJKB_02553 at 2668.906 kb on + strand, within OHPLBJKB_02553 at 2668.906 kb on + strand, within OHPLBJKB_02553 at 2668.906 kb on + strand, within OHPLBJKB_02553 at 2668.907 kb on - strand, within OHPLBJKB_02553 at 2668.907 kb on - strand, within OHPLBJKB_02553 at 2668.907 kb on - strand, within OHPLBJKB_02553 at 2668.907 kb on - strand, within OHPLBJKB_02553 at 2668.946 kb on + strand, within OHPLBJKB_02553 at 2668.947 kb on - strand, within OHPLBJKB_02553 at 2668.947 kb on - strand, within OHPLBJKB_02553 at 2668.947 kb on - strand, within OHPLBJKB_02553 at 2668.950 kb on + strand, within OHPLBJKB_02553 at 2669.058 kb on + strand, within OHPLBJKB_02553 at 2669.058 kb on + strand, within OHPLBJKB_02553 at 2669.059 kb on - strand, within OHPLBJKB_02553 at 2669.059 kb on - strand, within OHPLBJKB_02553 at 2669.155 kb on + strand, within OHPLBJKB_02553 at 2669.214 kb on + strand, within OHPLBJKB_02553 at 2669.339 kb on + strand, within OHPLBJKB_02553 at 2669.339 kb on + strand, within OHPLBJKB_02553 at 2669.340 kb on - strand, within OHPLBJKB_02553 at 2669.340 kb on - strand, within OHPLBJKB_02553 at 2669.340 kb on - strand, within OHPLBJKB_02553 at 2669.392 kb on - strand, within OHPLBJKB_02553 at 2669.400 kb on + strand, within OHPLBJKB_02553 at 2669.418 kb on + strand, within OHPLBJKB_02553 at 2669.418 kb on + strand, within OHPLBJKB_02553 at 2669.419 kb on - strand, within OHPLBJKB_02553
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,663,989 + OHPLBJKB_02551 0.20 +0.0 2,663,989 + OHPLBJKB_02551 0.20 +0.0 2,664,002 + OHPLBJKB_02551 0.21 +1.2 2,664,125 + OHPLBJKB_02551 0.33 +0.3 2,664,126 - OHPLBJKB_02551 0.33 -0.1 2,664,126 - OHPLBJKB_02551 0.33 -0.3 2,664,148 + OHPLBJKB_02551 0.35 +0.1 2,664,148 + OHPLBJKB_02551 0.35 -0.2 2,664,214 + OHPLBJKB_02551 0.41 -1.6 2,664,221 + OHPLBJKB_02551 0.42 -1.5 2,664,230 - OHPLBJKB_02551 0.43 -0.6 2,664,269 + OHPLBJKB_02551 0.46 -2.1 2,664,272 + OHPLBJKB_02551 0.46 +0.4 2,664,272 + OHPLBJKB_02551 0.46 +0.9 2,664,272 + OHPLBJKB_02551 0.46 +0.4 2,664,287 + OHPLBJKB_02551 0.48 -1.1 2,664,364 + OHPLBJKB_02551 0.55 +1.1 2,664,365 - OHPLBJKB_02551 0.55 +0.8 2,664,396 - OHPLBJKB_02551 0.58 +0.1 2,664,396 - OHPLBJKB_02551 0.58 -1.2 2,664,437 + OHPLBJKB_02551 0.62 -0.4 2,664,483 + OHPLBJKB_02551 0.66 +0.1 2,664,487 - OHPLBJKB_02551 0.66 -0.3 2,664,545 - OHPLBJKB_02551 0.72 -1.0 2,664,609 + OHPLBJKB_02551 0.78 +1.2 2,664,609 + OHPLBJKB_02551 0.78 -1.3 2,664,610 - OHPLBJKB_02551 0.78 +0.6 2,664,613 + OHPLBJKB_02551 0.78 +0.2 2,664,613 + OHPLBJKB_02551 0.78 +0.0 2,664,613 + OHPLBJKB_02551 0.78 +0.1 2,664,614 - OHPLBJKB_02551 0.78 -1.9 2,664,614 - OHPLBJKB_02551 0.78 -0.9 2,664,614 - OHPLBJKB_02551 0.78 -1.2 2,664,614 - OHPLBJKB_02551 0.78 -0.9 2,664,641 + OHPLBJKB_02551 0.81 +0.4 2,664,651 - OHPLBJKB_02551 0.82 -0.5 2,664,744 + -0.2 2,664,745 - -0.5 2,664,745 - -0.1 2,664,745 - +0.1 2,664,879 + +0.3 2,664,917 - +0.4 2,664,925 + +0.6 2,664,926 - +0.5 2,664,926 - +0.7 2,664,926 - -1.7 2,664,926 - +1.3 2,664,935 + -0.3 2,664,935 + -0.1 2,664,947 + -0.3 2,664,948 - +0.5 2,664,993 - +0.4 2,664,994 + -0.1 2,664,994 + -0.8 2,664,994 + -0.6 2,665,117 + -0.1 2,665,234 + -0.2 2,665,235 - -0.2 2,665,267 - -0.1 2,665,306 + OHPLBJKB_02552 0.11 -0.3 2,665,312 + OHPLBJKB_02552 0.11 -0.5 2,665,590 + OHPLBJKB_02552 0.19 -0.1 2,665,591 - OHPLBJKB_02552 0.19 -2.7 2,665,591 - OHPLBJKB_02552 0.19 -1.5 2,665,702 + OHPLBJKB_02552 0.22 +0.4 2,665,702 + OHPLBJKB_02552 0.22 +0.4 2,665,702 + OHPLBJKB_02552 0.22 -0.3 2,665,702 + OHPLBJKB_02552 0.22 -1.1 2,665,703 - OHPLBJKB_02552 0.22 -0.2 2,665,703 - OHPLBJKB_02552 0.22 +1.0 2,665,703 - OHPLBJKB_02552 0.22 -1.4 2,665,703 - OHPLBJKB_02552 0.22 +0.0 2,665,703 - OHPLBJKB_02552 0.22 -0.1 2,665,703 - OHPLBJKB_02552 0.22 +0.3 2,665,703 - OHPLBJKB_02552 0.22 +0.2 2,665,703 - OHPLBJKB_02552 0.22 +0.4 2,665,706 + OHPLBJKB_02552 0.22 +0.4 2,665,720 + OHPLBJKB_02552 0.23 +0.9 2,665,731 + OHPLBJKB_02552 0.23 -0.7 2,665,731 + OHPLBJKB_02552 0.23 +0.0 2,665,732 - OHPLBJKB_02552 0.23 -0.4 2,665,797 - OHPLBJKB_02552 0.25 -0.6 2,665,810 + OHPLBJKB_02552 0.25 +0.6 2,665,989 + OHPLBJKB_02552 0.30 +1.1 2,665,989 + OHPLBJKB_02552 0.30 -0.2 2,666,031 + OHPLBJKB_02552 0.32 -1.6 2,666,031 + OHPLBJKB_02552 0.32 +0.1 2,666,032 - OHPLBJKB_02552 0.32 +0.7 2,666,099 - OHPLBJKB_02552 0.34 -1.9 2,666,189 - OHPLBJKB_02552 0.36 +0.2 2,666,209 + OHPLBJKB_02552 0.37 -0.3 2,666,210 - OHPLBJKB_02552 0.37 -0.1 2,666,291 - OHPLBJKB_02552 0.39 -0.6 2,666,291 - OHPLBJKB_02552 0.39 -0.1 2,666,531 + OHPLBJKB_02552 0.46 +0.0 2,666,531 + OHPLBJKB_02552 0.46 -0.6 2,666,531 + OHPLBJKB_02552 0.46 -0.3 2,666,531 + OHPLBJKB_02552 0.46 -0.5 2,666,532 - OHPLBJKB_02552 0.46 -2.2 2,666,532 - OHPLBJKB_02552 0.46 -1.4 2,666,532 - OHPLBJKB_02552 0.46 -0.2 2,666,532 - OHPLBJKB_02552 0.46 +0.1 2,666,683 + OHPLBJKB_02552 0.50 +0.4 2,666,683 + OHPLBJKB_02552 0.50 +0.2 2,666,687 + OHPLBJKB_02552 0.50 +0.4 2,666,688 - OHPLBJKB_02552 0.50 +0.9 2,666,688 - OHPLBJKB_02552 0.50 +0.7 2,666,742 - OHPLBJKB_02552 0.52 +0.8 2,666,808 + OHPLBJKB_02552 0.54 -0.1 2,666,813 - OHPLBJKB_02552 0.54 -0.2 2,666,872 + OHPLBJKB_02552 0.56 +0.5 2,666,910 + OHPLBJKB_02552 0.57 +0.1 2,666,910 + OHPLBJKB_02552 0.57 -0.6 2,666,911 - OHPLBJKB_02552 0.57 -1.5 2,666,911 - OHPLBJKB_02552 0.57 -0.8 2,666,970 - OHPLBJKB_02552 0.58 +0.5 2,667,142 - OHPLBJKB_02552 0.63 -1.9 2,667,187 + OHPLBJKB_02552 0.65 -0.4 2,667,199 + OHPLBJKB_02552 0.65 +0.3 2,667,350 + OHPLBJKB_02552 0.69 -0.4 2,667,351 - OHPLBJKB_02552 0.69 -1.2 2,667,411 - OHPLBJKB_02552 0.71 +0.8 2,667,414 - OHPLBJKB_02552 0.71 -2.2 2,667,419 + OHPLBJKB_02552 0.71 -1.0 2,667,419 + OHPLBJKB_02552 0.71 +1.8 2,667,419 + OHPLBJKB_02552 0.71 -0.1 2,667,574 + OHPLBJKB_02552 0.76 -2.0 2,667,575 - OHPLBJKB_02552 0.76 -0.5 2,667,704 + OHPLBJKB_02552 0.79 -2.2 2,667,705 - OHPLBJKB_02552 0.80 -0.3 2,667,896 + OHPLBJKB_02552 0.85 -0.2 2,667,896 + OHPLBJKB_02552 0.85 +0.4 2,667,896 + OHPLBJKB_02552 0.85 -0.6 2,667,896 + OHPLBJKB_02552 0.85 +0.9 2,667,896 + OHPLBJKB_02552 0.85 -0.1 2,667,897 - OHPLBJKB_02552 0.85 -0.3 2,667,897 - OHPLBJKB_02552 0.85 -0.6 2,667,897 - OHPLBJKB_02552 0.85 -1.0 2,667,898 + OHPLBJKB_02552 0.85 +0.2 2,667,898 + OHPLBJKB_02552 0.85 -0.4 2,668,060 + OHPLBJKB_02552 0.90 +0.3 2,668,061 - OHPLBJKB_02552 0.90 -0.6 2,668,061 - OHPLBJKB_02552 0.90 +0.6 2,668,424 + +0.2 2,668,462 + -0.6 2,668,511 - -0.4 2,668,521 + -1.4 2,668,522 - +0.1 2,668,605 + +1.3 2,668,775 + OHPLBJKB_02553 0.22 -0.2 2,668,776 - OHPLBJKB_02553 0.22 +0.9 2,668,801 + OHPLBJKB_02553 0.24 +0.1 2,668,827 - OHPLBJKB_02553 0.27 +0.2 2,668,885 - OHPLBJKB_02553 0.33 -0.6 2,668,903 + OHPLBJKB_02553 0.35 +1.0 2,668,906 + OHPLBJKB_02553 0.35 -0.4 2,668,906 + OHPLBJKB_02553 0.35 +0.0 2,668,906 + OHPLBJKB_02553 0.35 +0.7 2,668,907 - OHPLBJKB_02553 0.35 +1.5 2,668,907 - OHPLBJKB_02553 0.35 +1.4 2,668,907 - OHPLBJKB_02553 0.35 -1.0 2,668,907 - OHPLBJKB_02553 0.35 +0.4 2,668,946 + OHPLBJKB_02553 0.39 -0.7 2,668,947 - OHPLBJKB_02553 0.40 -2.2 2,668,947 - OHPLBJKB_02553 0.40 -0.3 2,668,947 - OHPLBJKB_02553 0.40 -1.5 2,668,950 + OHPLBJKB_02553 0.40 +0.4 2,669,058 + OHPLBJKB_02553 0.51 +0.2 2,669,058 + OHPLBJKB_02553 0.51 -0.4 2,669,059 - OHPLBJKB_02553 0.51 -1.6 2,669,059 - OHPLBJKB_02553 0.51 -0.5 2,669,155 + OHPLBJKB_02553 0.61 +1.3 2,669,214 + OHPLBJKB_02553 0.67 +0.5 2,669,339 + OHPLBJKB_02553 0.80 +0.3 2,669,339 + OHPLBJKB_02553 0.80 +0.0 2,669,340 - OHPLBJKB_02553 0.81 +0.9 2,669,340 - OHPLBJKB_02553 0.81 +0.4 2,669,340 - OHPLBJKB_02553 0.81 +0.7 2,669,392 - OHPLBJKB_02553 0.86 -0.1 2,669,400 + OHPLBJKB_02553 0.87 -1.7 2,669,418 + OHPLBJKB_02553 0.89 +0.2 2,669,418 + OHPLBJKB_02553 0.89 -0.9 2,669,419 - OHPLBJKB_02553 0.89 -1.2
Or see this region's nucleotide sequence