Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02193 and OHPLBJKB_02194 are separated by 100 nucleotides OHPLBJKB_02194 and OHPLBJKB_02195 are separated by 63 nucleotides OHPLBJKB_02195 and OHPLBJKB_02196 overlap by 1 nucleotides
OHPLBJKB_02193: OHPLBJKB_02193 - HTH-type transcriptional regulator GltR, at 2,270,137 to 2,271,018
_02193
OHPLBJKB_02194: OHPLBJKB_02194 - Succinate semialdehyde dehydrogenase [NAD(P)+] Sad, at 2,271,119 to 2,272,507
_02194
OHPLBJKB_02195: OHPLBJKB_02195 - Glutaminase 2, at 2,272,571 to 2,273,497
_02195
OHPLBJKB_02196: OHPLBJKB_02196 - hypothetical protein, at 2,273,497 to 2,273,856
_02196
Position (kb)
2271
2272
2273 Strain fitness (log2 ratio)
-2
-1
0
1 at 2270.124 kb on + strand at 2270.133 kb on + strand at 2270.134 kb on - strand at 2270.184 kb on + strand at 2270.184 kb on + strand at 2270.185 kb on - strand at 2270.185 kb on - strand at 2270.295 kb on + strand, within OHPLBJKB_02193 at 2270.296 kb on - strand, within OHPLBJKB_02193 at 2270.308 kb on - strand, within OHPLBJKB_02193 at 2270.544 kb on - strand, within OHPLBJKB_02193 at 2270.545 kb on + strand, within OHPLBJKB_02193 at 2270.568 kb on + strand, within OHPLBJKB_02193 at 2270.569 kb on - strand, within OHPLBJKB_02193 at 2270.589 kb on + strand, within OHPLBJKB_02193 at 2270.617 kb on + strand, within OHPLBJKB_02193 at 2270.617 kb on + strand, within OHPLBJKB_02193 at 2270.618 kb on - strand, within OHPLBJKB_02193 at 2270.618 kb on - strand, within OHPLBJKB_02193 at 2270.631 kb on + strand, within OHPLBJKB_02193 at 2270.631 kb on + strand, within OHPLBJKB_02193 at 2270.817 kb on + strand, within OHPLBJKB_02193 at 2270.817 kb on + strand, within OHPLBJKB_02193 at 2270.854 kb on + strand, within OHPLBJKB_02193 at 2270.854 kb on + strand, within OHPLBJKB_02193 at 2271.050 kb on + strand at 2271.053 kb on + strand at 2271.083 kb on + strand at 2271.083 kb on + strand at 2271.091 kb on + strand at 2271.103 kb on + strand at 2271.103 kb on + strand at 2271.113 kb on - strand at 2271.128 kb on - strand at 2271.128 kb on - strand at 2271.266 kb on - strand, within OHPLBJKB_02194 at 2271.267 kb on + strand, within OHPLBJKB_02194 at 2271.268 kb on - strand, within OHPLBJKB_02194 at 2271.268 kb on - strand, within OHPLBJKB_02194 at 2271.455 kb on - strand, within OHPLBJKB_02194 at 2271.455 kb on - strand, within OHPLBJKB_02194 at 2271.517 kb on + strand, within OHPLBJKB_02194 at 2271.591 kb on + strand, within OHPLBJKB_02194 at 2271.592 kb on - strand, within OHPLBJKB_02194 at 2271.592 kb on - strand, within OHPLBJKB_02194 at 2271.592 kb on - strand, within OHPLBJKB_02194 at 2271.592 kb on - strand, within OHPLBJKB_02194 at 2271.592 kb on - strand, within OHPLBJKB_02194 at 2271.595 kb on + strand, within OHPLBJKB_02194 at 2271.595 kb on + strand, within OHPLBJKB_02194 at 2271.595 kb on + strand, within OHPLBJKB_02194 at 2271.595 kb on + strand, within OHPLBJKB_02194 at 2271.595 kb on + strand, within OHPLBJKB_02194 at 2271.596 kb on - strand, within OHPLBJKB_02194 at 2271.596 kb on - strand, within OHPLBJKB_02194 at 2271.672 kb on + strand, within OHPLBJKB_02194 at 2271.672 kb on + strand, within OHPLBJKB_02194 at 2271.673 kb on - strand, within OHPLBJKB_02194 at 2271.673 kb on - strand, within OHPLBJKB_02194 at 2271.673 kb on - strand, within OHPLBJKB_02194 at 2271.674 kb on + strand, within OHPLBJKB_02194 at 2271.674 kb on + strand, within OHPLBJKB_02194 at 2271.841 kb on + strand, within OHPLBJKB_02194 at 2271.841 kb on + strand, within OHPLBJKB_02194 at 2271.842 kb on - strand, within OHPLBJKB_02194 at 2271.918 kb on + strand, within OHPLBJKB_02194 at 2271.919 kb on - strand, within OHPLBJKB_02194 at 2271.919 kb on - strand, within OHPLBJKB_02194 at 2271.919 kb on - strand, within OHPLBJKB_02194 at 2271.971 kb on - strand, within OHPLBJKB_02194 at 2272.063 kb on - strand, within OHPLBJKB_02194 at 2272.150 kb on + strand, within OHPLBJKB_02194 at 2272.150 kb on + strand, within OHPLBJKB_02194 at 2272.151 kb on - strand, within OHPLBJKB_02194 at 2272.154 kb on + strand, within OHPLBJKB_02194 at 2272.154 kb on + strand, within OHPLBJKB_02194 at 2272.154 kb on + strand, within OHPLBJKB_02194 at 2272.155 kb on - strand, within OHPLBJKB_02194 at 2272.155 kb on - strand, within OHPLBJKB_02194 at 2272.157 kb on + strand, within OHPLBJKB_02194 at 2272.339 kb on + strand, within OHPLBJKB_02194 at 2272.461 kb on + strand at 2272.474 kb on + strand at 2272.515 kb on + strand at 2272.516 kb on - strand at 2272.516 kb on - strand at 2272.516 kb on - strand at 2272.529 kb on - strand at 2272.531 kb on - strand at 2272.643 kb on - strand at 2272.655 kb on + strand at 2272.656 kb on - strand at 2272.673 kb on - strand, within OHPLBJKB_02195 at 2272.678 kb on - strand, within OHPLBJKB_02195 at 2272.702 kb on + strand, within OHPLBJKB_02195 at 2272.702 kb on + strand, within OHPLBJKB_02195 at 2272.898 kb on - strand, within OHPLBJKB_02195 at 2272.898 kb on - strand, within OHPLBJKB_02195 at 2272.945 kb on + strand, within OHPLBJKB_02195 at 2272.981 kb on + strand, within OHPLBJKB_02195 at 2272.981 kb on + strand, within OHPLBJKB_02195 at 2272.981 kb on + strand, within OHPLBJKB_02195 at 2272.981 kb on + strand, within OHPLBJKB_02195 at 2272.981 kb on + strand, within OHPLBJKB_02195 at 2272.982 kb on - strand, within OHPLBJKB_02195 at 2272.982 kb on - strand, within OHPLBJKB_02195 at 2272.982 kb on - strand, within OHPLBJKB_02195 at 2272.982 kb on - strand, within OHPLBJKB_02195 at 2273.020 kb on + strand, within OHPLBJKB_02195 at 2273.020 kb on + strand, within OHPLBJKB_02195 at 2273.021 kb on - strand, within OHPLBJKB_02195 at 2273.027 kb on + strand, within OHPLBJKB_02195 at 2273.179 kb on - strand, within OHPLBJKB_02195 at 2273.179 kb on - strand, within OHPLBJKB_02195 at 2273.224 kb on + strand, within OHPLBJKB_02195 at 2273.224 kb on + strand, within OHPLBJKB_02195 at 2273.231 kb on - strand, within OHPLBJKB_02195 at 2273.296 kb on + strand, within OHPLBJKB_02195 at 2273.296 kb on + strand, within OHPLBJKB_02195 at 2273.296 kb on + strand, within OHPLBJKB_02195 at 2273.296 kb on + strand, within OHPLBJKB_02195 at 2273.297 kb on - strand, within OHPLBJKB_02195 at 2273.297 kb on - strand, within OHPLBJKB_02195 at 2273.297 kb on - strand, within OHPLBJKB_02195 at 2273.297 kb on - strand, within OHPLBJKB_02195 at 2273.300 kb on + strand, within OHPLBJKB_02195 at 2273.300 kb on + strand, within OHPLBJKB_02195 at 2273.300 kb on + strand, within OHPLBJKB_02195 at 2273.432 kb on - strand at 2273.467 kb on - strand at 2273.496 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,270,124 + -0.4 2,270,133 + -1.1 2,270,134 - -0.8 2,270,184 + -0.2 2,270,184 + -0.4 2,270,185 - +1.2 2,270,185 - -0.2 2,270,295 + OHPLBJKB_02193 0.18 +0.3 2,270,296 - OHPLBJKB_02193 0.18 +0.2 2,270,308 - OHPLBJKB_02193 0.19 -0.6 2,270,544 - OHPLBJKB_02193 0.46 +0.1 2,270,545 + OHPLBJKB_02193 0.46 +1.6 2,270,568 + OHPLBJKB_02193 0.49 +0.3 2,270,569 - OHPLBJKB_02193 0.49 +0.4 2,270,589 + OHPLBJKB_02193 0.51 -2.5 2,270,617 + OHPLBJKB_02193 0.54 +0.2 2,270,617 + OHPLBJKB_02193 0.54 -1.0 2,270,618 - OHPLBJKB_02193 0.55 -0.4 2,270,618 - OHPLBJKB_02193 0.55 +0.4 2,270,631 + OHPLBJKB_02193 0.56 -0.7 2,270,631 + OHPLBJKB_02193 0.56 -0.0 2,270,817 + OHPLBJKB_02193 0.77 -0.5 2,270,817 + OHPLBJKB_02193 0.77 +1.4 2,270,854 + OHPLBJKB_02193 0.81 -0.5 2,270,854 + OHPLBJKB_02193 0.81 -0.4 2,271,050 + -2.6 2,271,053 + -1.2 2,271,083 + +0.0 2,271,083 + +0.9 2,271,091 + -0.3 2,271,103 + -0.3 2,271,103 + -0.3 2,271,113 - -0.4 2,271,128 - -0.3 2,271,128 - +0.4 2,271,266 - OHPLBJKB_02194 0.11 -0.8 2,271,267 + OHPLBJKB_02194 0.11 -0.2 2,271,268 - OHPLBJKB_02194 0.11 -0.6 2,271,268 - OHPLBJKB_02194 0.11 -0.4 2,271,455 - OHPLBJKB_02194 0.24 -0.1 2,271,455 - OHPLBJKB_02194 0.24 +0.2 2,271,517 + OHPLBJKB_02194 0.29 +0.0 2,271,591 + OHPLBJKB_02194 0.34 -1.8 2,271,592 - OHPLBJKB_02194 0.34 +0.1 2,271,592 - OHPLBJKB_02194 0.34 +0.7 2,271,592 - OHPLBJKB_02194 0.34 -0.9 2,271,592 - OHPLBJKB_02194 0.34 -0.1 2,271,592 - OHPLBJKB_02194 0.34 +0.6 2,271,595 + OHPLBJKB_02194 0.34 -0.7 2,271,595 + OHPLBJKB_02194 0.34 +0.1 2,271,595 + OHPLBJKB_02194 0.34 -0.3 2,271,595 + OHPLBJKB_02194 0.34 +0.0 2,271,595 + OHPLBJKB_02194 0.34 +0.6 2,271,596 - OHPLBJKB_02194 0.34 +0.9 2,271,596 - OHPLBJKB_02194 0.34 -0.4 2,271,672 + OHPLBJKB_02194 0.40 -0.5 2,271,672 + OHPLBJKB_02194 0.40 -1.1 2,271,673 - OHPLBJKB_02194 0.40 +0.6 2,271,673 - OHPLBJKB_02194 0.40 -0.1 2,271,673 - OHPLBJKB_02194 0.40 -0.3 2,271,674 + OHPLBJKB_02194 0.40 +1.3 2,271,674 + OHPLBJKB_02194 0.40 -1.4 2,271,841 + OHPLBJKB_02194 0.52 -1.4 2,271,841 + OHPLBJKB_02194 0.52 -0.7 2,271,842 - OHPLBJKB_02194 0.52 +0.2 2,271,918 + OHPLBJKB_02194 0.58 -1.1 2,271,919 - OHPLBJKB_02194 0.58 -0.1 2,271,919 - OHPLBJKB_02194 0.58 -0.4 2,271,919 - OHPLBJKB_02194 0.58 -0.2 2,271,971 - OHPLBJKB_02194 0.61 -0.2 2,272,063 - OHPLBJKB_02194 0.68 +0.8 2,272,150 + OHPLBJKB_02194 0.74 +0.5 2,272,150 + OHPLBJKB_02194 0.74 -0.7 2,272,151 - OHPLBJKB_02194 0.74 -0.1 2,272,154 + OHPLBJKB_02194 0.75 -1.9 2,272,154 + OHPLBJKB_02194 0.75 -0.4 2,272,154 + OHPLBJKB_02194 0.75 -0.9 2,272,155 - OHPLBJKB_02194 0.75 -0.0 2,272,155 - OHPLBJKB_02194 0.75 +0.0 2,272,157 + OHPLBJKB_02194 0.75 -2.3 2,272,339 + OHPLBJKB_02194 0.88 -0.1 2,272,461 + +0.4 2,272,474 + -0.2 2,272,515 + +0.1 2,272,516 - +1.3 2,272,516 - -0.1 2,272,516 - +0.9 2,272,529 - -0.5 2,272,531 - +0.6 2,272,643 - -0.6 2,272,655 + +0.4 2,272,656 - -0.2 2,272,673 - OHPLBJKB_02195 0.11 +1.5 2,272,678 - OHPLBJKB_02195 0.12 -0.6 2,272,702 + OHPLBJKB_02195 0.14 -0.2 2,272,702 + OHPLBJKB_02195 0.14 +0.4 2,272,898 - OHPLBJKB_02195 0.35 +0.2 2,272,898 - OHPLBJKB_02195 0.35 +1.3 2,272,945 + OHPLBJKB_02195 0.40 -0.4 2,272,981 + OHPLBJKB_02195 0.44 +0.6 2,272,981 + OHPLBJKB_02195 0.44 -0.0 2,272,981 + OHPLBJKB_02195 0.44 -0.1 2,272,981 + OHPLBJKB_02195 0.44 +0.0 2,272,981 + OHPLBJKB_02195 0.44 +0.7 2,272,982 - OHPLBJKB_02195 0.44 -0.1 2,272,982 - OHPLBJKB_02195 0.44 -1.4 2,272,982 - OHPLBJKB_02195 0.44 +0.8 2,272,982 - OHPLBJKB_02195 0.44 -0.4 2,273,020 + OHPLBJKB_02195 0.48 +0.6 2,273,020 + OHPLBJKB_02195 0.48 +0.5 2,273,021 - OHPLBJKB_02195 0.49 +0.5 2,273,027 + OHPLBJKB_02195 0.49 -1.1 2,273,179 - OHPLBJKB_02195 0.66 +0.4 2,273,179 - OHPLBJKB_02195 0.66 -1.6 2,273,224 + OHPLBJKB_02195 0.70 +1.2 2,273,224 + OHPLBJKB_02195 0.70 +0.0 2,273,231 - OHPLBJKB_02195 0.71 +0.5 2,273,296 + OHPLBJKB_02195 0.78 -0.2 2,273,296 + OHPLBJKB_02195 0.78 +0.4 2,273,296 + OHPLBJKB_02195 0.78 -0.5 2,273,296 + OHPLBJKB_02195 0.78 -0.5 2,273,297 - OHPLBJKB_02195 0.78 +0.1 2,273,297 - OHPLBJKB_02195 0.78 +0.1 2,273,297 - OHPLBJKB_02195 0.78 -0.4 2,273,297 - OHPLBJKB_02195 0.78 +0.6 2,273,300 + OHPLBJKB_02195 0.79 -0.3 2,273,300 + OHPLBJKB_02195 0.79 -0.9 2,273,300 + OHPLBJKB_02195 0.79 -0.7 2,273,432 - -0.2 2,273,467 - -2.5 2,273,496 - -0.3
Or see this region's nucleotide sequence