Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_16155

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
3,540,164	+		OKGIIK_16150	0.88	-1.6
3,540,164	+		OKGIIK_16150	0.88	+1.9
3,540,165	-		OKGIIK_16150	0.88	+1.1
3,540,165	-		OKGIIK_16150	0.88	-0.6
3,540,165	-		OKGIIK_16150	0.88	-1.7
3,540,267	+				+0.6
3,540,267	+				-0.5
3,540,267	+				-0.3
3,540,267	+				-0.4
3,540,267	+				+1.2
3,540,267	+				-2.0
3,540,267	+				+0.2
3,540,267	+				-1.7
3,540,267	+				+0.3
3,540,267	+				+1.9
3,540,267	+				-0.9
3,540,268	-				-1.4
3,540,268	-				-0.3
3,540,268	-				+0.2
3,540,268	-				+1.4
3,540,268	-				-0.5
3,540,268	-				-2.1
3,540,268	-				-0.2
3,540,356	+				-0.5
3,540,356	+				-0.7
3,540,414	+				-0.7
3,540,415	-				-1.2
3,540,415	-				-2.2
3,540,415	-				-0.9
3,540,415	-				+1.0
3,540,415	-				-1.4
3,540,552	+				-0.3
3,540,671	+				+1.1
3,540,671	+				+0.3
3,540,671	+				+0.4
3,540,672	-				-1.3
3,540,672	-				-0.3
3,540,672	-				-0.2
3,540,723	+				-0.4
3,540,723	+				-1.0
3,540,723	+				+0.5
3,540,723	+				+1.1
3,540,724	-				+1.4
3,540,724	-				-3.4
3,540,724	-				-1.5
3,540,724	-				+1.4
3,540,724	-				-1.9
3,540,731	+				+0.7
3,540,778	+				-1.6
3,540,778	+				-0.6
3,540,779	-				+0.8
3,540,784	+				-0.7
3,540,815	+				-1.9
3,540,815	+				+2.1
3,540,815	+				-0.5
3,540,816	-				-0.9
3,540,816	-				+1.7
3,540,891	+				-1.2
3,540,892	-				-1.2
3,540,892	-				-2.5
3,540,892	-				-0.2
3,541,001	+				+0.6
3,541,001	+				-1.2
3,541,002	-				-0.6
3,541,002	-				-0.5
3,541,002	-				+1.2
3,541,002	-				+2.0
3,541,002	-				+0.8
3,541,002	-				+0.0
3,541,110	+				-0.5
3,541,111	-				-0.5
3,541,154	+				-1.7
3,541,154	+				-1.4
3,541,154	+				+0.6
3,541,154	+				-0.5
3,541,155	-				+0.4
3,541,238	+				+0.2
3,541,238	+				+0.2
3,541,238	+				+0.0
3,541,682	+		OKGIIK_16155	0.20	-0.9
3,541,682	+		OKGIIK_16155	0.20	-0.7
3,541,683	-		OKGIIK_16155	0.20	-1.6
3,541,683	-		OKGIIK_16155	0.20	-1.2
3,541,850	+		OKGIIK_16155	0.25	-0.2
3,541,984	+		OKGIIK_16155	0.29	-0.6
3,542,096	+		OKGIIK_16155	0.33	+0.9
3,542,096	+		OKGIIK_16155	0.33	-0.2
3,542,097	-		OKGIIK_16155	0.33	+0.2
3,542,097	-		OKGIIK_16155	0.33	-0.8
3,542,097	-		OKGIIK_16155	0.33	-0.9
3,542,097	-		OKGIIK_16155	0.33	-0.4
3,542,170	+		OKGIIK_16155	0.35	-0.5
3,542,170	+		OKGIIK_16155	0.35	-0.1
3,542,170	+		OKGIIK_16155	0.35	+1.0
3,542,171	-		OKGIIK_16155	0.35	+0.9
3,542,171	-		OKGIIK_16155	0.35	-0.9
3,542,171	-		OKGIIK_16155	0.35	+0.1
3,542,729	-		OKGIIK_16155	0.52	+0.4
3,542,865	-		OKGIIK_16155	0.56	-0.2
3,542,996	+		OKGIIK_16155	0.59	+0.0
3,542,997	-		OKGIIK_16155	0.59	+0.6
3,542,997	-		OKGIIK_16155	0.59	+0.4
3,543,002	+		OKGIIK_16155	0.60	-0.5
3,543,002	+		OKGIIK_16155	0.60	-1.0
3,543,419	+		OKGIIK_16155	0.72	+1.0
3,543,419	+		OKGIIK_16155	0.72	+1.2
3,543,533	+		OKGIIK_16155	0.75	-0.5
3,543,534	-		OKGIIK_16155	0.75	+0.8
3,543,534	-		OKGIIK_16155	0.75	-0.8
3,543,614	+		OKGIIK_16155	0.78	-0.9
3,543,614	+		OKGIIK_16155	0.78	+0.4
3,543,614	+		OKGIIK_16155	0.78	-0.1
3,543,614	+		OKGIIK_16155	0.78	+1.0
3,543,614	+		OKGIIK_16155	0.78	-0.5
3,543,615	-		OKGIIK_16155	0.78	+0.6
3,543,615	-		OKGIIK_16155	0.78	-1.2
3,543,615	-		OKGIIK_16155	0.78	+0.1
3,543,680	+		OKGIIK_16155	0.80	+0.2
3,543,680	+		OKGIIK_16155	0.80	-0.7
3,543,681	-		OKGIIK_16155	0.80	+0.1
3,543,691	+		OKGIIK_16155	0.80	+0.8
3,543,691	+		OKGIIK_16155	0.80	+0.3
3,543,691	+		OKGIIK_16155	0.80	-0.4
3,543,691	+		OKGIIK_16155	0.80	-0.4
3,543,691	+		OKGIIK_16155	0.80	-2.5
3,543,692	-		OKGIIK_16155	0.80	-1.6
3,543,692	-		OKGIIK_16155	0.80	-0.6
3,543,692	-		OKGIIK_16155	0.80	+1.1
3,543,692	-		OKGIIK_16155	0.80	+1.3
3,543,692	-		OKGIIK_16155	0.80	+1.8
3,543,765	+		OKGIIK_16155	0.82	-0.2
3,544,175	+				+0.0
3,544,271	+				-1.1
3,544,524	+				-1.7
3,544,524	+				+0.4
3,544,524	+				-1.4
3,544,524	+				+0.6
3,544,524	+				+0.2
3,544,524	+				-0.6
3,544,524	+				-2.0
3,544,525	-				-0.4
3,544,525	-				-0.6
3,544,525	-				-1.2
3,544,816	-	icdM	OKGIIK_16160	0.14	-0.2
3,544,962	+	icdM	OKGIIK_16160	0.21	-0.7
3,544,962	+	icdM	OKGIIK_16160	0.21	-2.1
3,544,962	+	icdM	OKGIIK_16160	0.21	+0.4
3,544,962	+	icdM	OKGIIK_16160	0.21	-0.9
3,544,962	+	icdM	OKGIIK_16160	0.21	+0.1
3,544,963	-	icdM	OKGIIK_16160	0.21	-0.6
3,544,963	-	icdM	OKGIIK_16160	0.21	-0.7
3,544,963	-	icdM	OKGIIK_16160	0.21	+1.5
3,545,046	+	icdM	OKGIIK_16160	0.25	+1.5
3,545,046	+	icdM	OKGIIK_16160	0.25	+0.4
3,545,046	+	icdM	OKGIIK_16160	0.25	+0.0
3,545,047	-	icdM	OKGIIK_16160	0.25	-1.0
3,545,047	-	icdM	OKGIIK_16160	0.25	+0.2
3,545,128	+	icdM	OKGIIK_16160	0.28	+0.7
3,545,128	+	icdM	OKGIIK_16160	0.28	-2.4
3,545,128	+	icdM	OKGIIK_16160	0.28	-2.2
3,545,128	+	icdM	OKGIIK_16160	0.28	-1.2
3,545,129	-	icdM	OKGIIK_16160	0.28	-1.7
3,545,129	-	icdM	OKGIIK_16160	0.28	+0.9
3,545,129	-	icdM	OKGIIK_16160	0.28	+0.4
3,545,325	+	icdM	OKGIIK_16160	0.37	+0.5
3,545,325	+	icdM	OKGIIK_16160	0.37	+0.7
3,545,326	-	icdM	OKGIIK_16160	0.37	-0.2
3,545,326	-	icdM	OKGIIK_16160	0.37	+0.7
3,545,326	-	icdM	OKGIIK_16160	0.37	-1.9
3,545,326	-	icdM	OKGIIK_16160	0.37	-2.3
3,545,326	-	icdM	OKGIIK_16160	0.37	-1.3