Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_12590

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
2,709,879	-				+0.8
2,710,024	+				+0.2
2,710,024	+				+0.1
2,710,024	+				-0.9
2,710,024	+				-0.5
2,710,024	+				+0.1
2,710,024	+				+0.1
2,710,024	+				-0.6
2,710,025	-				-0.8
2,710,025	-				-0.9
2,710,025	-				+0.8
2,710,025	-				-1.0
2,710,025	-				-0.9
2,710,108	+	dapB	OKGIIK_12585	0.11	-1.0
2,710,108	+	dapB	OKGIIK_12585	0.11	+0.3
2,710,108	+	dapB	OKGIIK_12585	0.11	-0.1
2,710,108	+	dapB	OKGIIK_12585	0.11	+0.5
2,710,109	-	dapB	OKGIIK_12585	0.11	-3.0
2,710,188	+	dapB	OKGIIK_12585	0.21	-0.6
2,710,188	+	dapB	OKGIIK_12585	0.21	-1.1
2,710,188	+	dapB	OKGIIK_12585	0.21	+1.0
2,710,189	-	dapB	OKGIIK_12585	0.21	-0.2
2,710,189	-	dapB	OKGIIK_12585	0.21	-0.8
2,710,329	+	dapB	OKGIIK_12585	0.38	-1.0
2,710,330	-	dapB	OKGIIK_12585	0.38	-1.6
2,710,330	-	dapB	OKGIIK_12585	0.38	+0.9
2,710,330	-	dapB	OKGIIK_12585	0.38	-1.0
2,710,330	-	dapB	OKGIIK_12585	0.38	+0.1
2,710,330	-	dapB	OKGIIK_12585	0.38	+0.5
2,710,330	-	dapB	OKGIIK_12585	0.38	-0.5
2,710,363	+	dapB	OKGIIK_12585	0.42	-1.0
2,710,369	+	dapB	OKGIIK_12585	0.43	-1.5
2,710,369	+	dapB	OKGIIK_12585	0.43	-0.1
2,710,369	+	dapB	OKGIIK_12585	0.43	+1.1
2,710,370	-	dapB	OKGIIK_12585	0.43	-0.6
2,710,370	-	dapB	OKGIIK_12585	0.43	-1.3
2,710,370	-	dapB	OKGIIK_12585	0.43	-0.7
2,710,370	-	dapB	OKGIIK_12585	0.43	-0.5
2,710,370	-	dapB	OKGIIK_12585	0.43	-1.0
2,710,370	-	dapB	OKGIIK_12585	0.43	-1.9
2,710,370	-	dapB	OKGIIK_12585	0.43	+1.5
2,710,370	-	dapB	OKGIIK_12585	0.43	+0.3
2,710,507	+	dapB	OKGIIK_12585	0.60	-0.8
2,710,507	+	dapB	OKGIIK_12585	0.60	+0.2
2,710,508	-	dapB	OKGIIK_12585	0.61	+1.5
2,710,508	-	dapB	OKGIIK_12585	0.61	-0.3
2,710,508	-	dapB	OKGIIK_12585	0.61	+0.5
2,710,508	-	dapB	OKGIIK_12585	0.61	-0.2
2,710,539	+	dapB	OKGIIK_12585	0.64	+1.2
2,710,539	+	dapB	OKGIIK_12585	0.64	-0.0
2,710,540	-	dapB	OKGIIK_12585	0.65	+0.0
2,710,540	-	dapB	OKGIIK_12585	0.65	+0.8
2,710,540	-	dapB	OKGIIK_12585	0.65	-0.2
2,710,603	+	dapB	OKGIIK_12585	0.72	-0.0
2,710,603	+	dapB	OKGIIK_12585	0.72	-2.5
2,710,603	+	dapB	OKGIIK_12585	0.72	+0.2
2,710,603	+	dapB	OKGIIK_12585	0.72	+0.4
2,710,603	+	dapB	OKGIIK_12585	0.72	-0.6
2,710,603	+	dapB	OKGIIK_12585	0.72	-0.4
2,710,603	+	dapB	OKGIIK_12585	0.72	+1.1
2,710,604	-	dapB	OKGIIK_12585	0.73	-0.0
2,710,604	-	dapB	OKGIIK_12585	0.73	+0.9
2,710,604	-	dapB	OKGIIK_12585	0.73	+0.3
2,710,604	-	dapB	OKGIIK_12585	0.73	-0.4
2,710,604	-	dapB	OKGIIK_12585	0.73	-2.5
2,710,647	-	dapB	OKGIIK_12585	0.78	-0.2
2,710,889	+				+1.1
2,710,889	+				+1.3
2,710,889	+				+0.8
2,710,889	+				-0.8
2,710,889	+				+0.6
2,710,889	+				+0.5
2,710,889	+				+1.8
2,710,889	+				+0.9
2,710,889	+				-0.5
2,710,889	+				+0.7
2,710,889	+				-0.8
2,710,889	+				+1.1
2,710,889	+				+0.8
2,710,889	+				-0.0
2,710,889	+				-0.5
2,710,889	+				-2.0
2,710,889	+				+0.5
2,710,889	+				-0.3
2,710,889	+				+0.4
2,710,890	-				+1.0
2,710,890	-				-0.8
2,710,890	-				+0.4
2,710,890	-				+0.3
2,710,890	-				-0.5
2,710,890	-				+2.1
2,710,890	-				-1.8
2,710,890	-				-0.2
2,710,890	-				+0.2
2,710,890	-				-1.3
2,710,890	-				-0.2
2,710,890	-				-1.9
2,710,913	+				+0.6
2,710,913	+				-0.8
2,711,531	+	lpdA	OKGIIK_12590	0.37	+0.2
2,711,709	-	lpdA	OKGIIK_12590	0.47	-0.8
2,711,870	+	lpdA	OKGIIK_12590	0.56	+0.3
2,712,233	+	lpdA	OKGIIK_12590	0.76	+1.2
2,712,474	+	lpdA	OKGIIK_12590	0.90	+2.0
2,712,475	-	lpdA	OKGIIK_12590	0.90	+0.5
2,712,761	+				+1.7
2,712,884	+	aceF	OKGIIK_12595	0.15	-0.3
2,712,884	+	aceF	OKGIIK_12595	0.15	+2.0
2,712,885	-	aceF	OKGIIK_12595	0.15	+1.0
2,712,885	-	aceF	OKGIIK_12595	0.15	-1.3
2,712,885	-	aceF	OKGIIK_12595	0.15	-1.0
2,713,083	+	aceF	OKGIIK_12595	0.29	+0.7
2,713,085	+	aceF	OKGIIK_12595	0.29	+1.1
2,713,467	-	aceF	OKGIIK_12595	0.57	-0.9