Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_12030

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
2,590,148	+	chlD	OKGIIK_12020	0.55	-2.1
2,590,148	+	chlD	OKGIIK_12020	0.55	-0.8
2,590,148	+	chlD	OKGIIK_12020	0.55	-0.3
2,590,148	+	chlD	OKGIIK_12020	0.55	+0.2
2,590,148	+	chlD	OKGIIK_12020	0.55	+0.6
2,590,148	+	chlD	OKGIIK_12020	0.55	+0.7
2,590,148	+	chlD	OKGIIK_12020	0.55	-0.8
2,590,148	+	chlD	OKGIIK_12020	0.55	+0.6
2,590,148	+	chlD	OKGIIK_12020	0.55	+0.3
2,590,148	+	chlD	OKGIIK_12020	0.55	+0.5
2,590,148	+	chlD	OKGIIK_12020	0.55	+1.3
2,590,148	+	chlD	OKGIIK_12020	0.55	+1.5
2,590,148	+	chlD	OKGIIK_12020	0.55	-1.0
2,590,149	-	chlD	OKGIIK_12020	0.55	-0.0
2,590,149	-	chlD	OKGIIK_12020	0.55	-0.3
2,590,149	-	chlD	OKGIIK_12020	0.55	-1.0
2,590,149	-	chlD	OKGIIK_12020	0.55	-1.3
2,590,149	-	chlD	OKGIIK_12020	0.55	-0.8
2,590,149	-	chlD	OKGIIK_12020	0.55	+1.1
2,590,149	-	chlD	OKGIIK_12020	0.55	+0.9
2,590,149	-	chlD	OKGIIK_12020	0.55	-1.6
2,590,149	-	chlD	OKGIIK_12020	0.55	+1.4
2,590,149	-	chlD	OKGIIK_12020	0.55	+0.6
2,590,149	-	chlD	OKGIIK_12020	0.55	-0.9
2,590,149	-	chlD	OKGIIK_12020	0.55	-1.2
2,590,149	-	chlD	OKGIIK_12020	0.55	+0.7
2,590,149	-	chlD	OKGIIK_12020	0.55	-0.1
2,590,149	-	chlD	OKGIIK_12020	0.55	+3.1
2,590,149	-	chlD	OKGIIK_12020	0.55	-0.2
2,590,149	-	chlD	OKGIIK_12020	0.55	+0.5
2,590,701	+		OKGIIK_12025	0.23	+0.6
2,590,702	-		OKGIIK_12025	0.23	+0.6
2,590,702	-		OKGIIK_12025	0.23	+0.2
2,590,702	-		OKGIIK_12025	0.23	-0.2
2,590,932	+		OKGIIK_12025	0.67	-2.0
2,590,933	-		OKGIIK_12025	0.67	+1.3
2,590,933	-		OKGIIK_12025	0.67	+0.0
2,590,933	-		OKGIIK_12025	0.67	+0.2
2,591,272	+	yeaD2	OKGIIK_12030	0.19	-0.1
2,591,272	+	yeaD2	OKGIIK_12030	0.19	-0.3
2,591,272	+	yeaD2	OKGIIK_12030	0.19	-0.5
2,591,272	+	yeaD2	OKGIIK_12030	0.19	+1.6
2,591,272	+	yeaD2	OKGIIK_12030	0.19	-0.2
2,591,272	+	yeaD2	OKGIIK_12030	0.19	+1.8
2,591,273	-	yeaD2	OKGIIK_12030	0.19	-0.8
2,591,273	-	yeaD2	OKGIIK_12030	0.19	-1.4
2,591,273	-	yeaD2	OKGIIK_12030	0.19	+1.1
2,591,273	-	yeaD2	OKGIIK_12030	0.19	-0.7
2,591,273	-	yeaD2	OKGIIK_12030	0.19	+0.6
2,591,645	+	yeaD2	OKGIIK_12030	0.58	-1.0
2,591,778	+	yeaD2	OKGIIK_12030	0.73	-1.0
2,591,778	+	yeaD2	OKGIIK_12030	0.73	+1.3
2,591,778	+	yeaD2	OKGIIK_12030	0.73	-1.5
2,591,778	+	yeaD2	OKGIIK_12030	0.73	+1.1
2,591,778	+	yeaD2	OKGIIK_12030	0.73	+0.3
2,591,779	-	yeaD2	OKGIIK_12030	0.73	+0.0
2,591,779	-	yeaD2	OKGIIK_12030	0.73	+0.9
2,591,779	-	yeaD2	OKGIIK_12030	0.73	+1.0
2,591,844	-	yeaD2	OKGIIK_12030	0.80	+0.4
2,591,844	-	yeaD2	OKGIIK_12030	0.80	-0.4
2,591,844	-	yeaD2	OKGIIK_12030	0.80	-1.6
2,591,880	-	yeaD2	OKGIIK_12030	0.84	-1.0
2,592,063	+				+0.3
2,592,063	+				-0.0
2,592,103	+				-0.9
2,592,103	+				-0.3
2,592,103	+				+1.6
2,592,104	-				+1.6
2,592,104	-				+0.4
2,592,104	-				-2.4
2,592,169	+	moxR	OKGIIK_12035	0.14	-1.6
2,592,169	+	moxR	OKGIIK_12035	0.14	-2.5
2,592,169	+	moxR	OKGIIK_12035	0.14	-0.1
2,592,169	+	moxR	OKGIIK_12035	0.14	-0.2
2,592,169	+	moxR	OKGIIK_12035	0.14	-0.5
2,592,169	+	moxR	OKGIIK_12035	0.14	-0.4
2,592,169	+	moxR	OKGIIK_12035	0.14	-0.8
2,592,169	+	moxR	OKGIIK_12035	0.14	-1.0
2,592,170	-	moxR	OKGIIK_12035	0.14	+0.2
2,592,170	-	moxR	OKGIIK_12035	0.14	-0.2
2,592,170	-	moxR	OKGIIK_12035	0.14	+0.6
2,592,170	-	moxR	OKGIIK_12035	0.14	-0.1
2,592,170	-	moxR	OKGIIK_12035	0.14	-0.8
2,592,316	+	moxR	OKGIIK_12035	0.29	-0.4
2,592,316	+	moxR	OKGIIK_12035	0.29	+0.3
2,592,316	+	moxR	OKGIIK_12035	0.29	+0.1
2,592,316	+	moxR	OKGIIK_12035	0.29	-0.0
2,592,316	+	moxR	OKGIIK_12035	0.29	-0.8
2,592,317	-	moxR	OKGIIK_12035	0.29	+0.4
2,592,317	-	moxR	OKGIIK_12035	0.29	-0.0
2,592,317	-	moxR	OKGIIK_12035	0.29	-0.6
2,592,317	-	moxR	OKGIIK_12035	0.29	+0.5
2,592,317	-	moxR	OKGIIK_12035	0.29	-0.4
2,592,317	-	moxR	OKGIIK_12035	0.29	-2.5
2,592,317	-	moxR	OKGIIK_12035	0.29	+0.6
2,592,317	-	moxR	OKGIIK_12035	0.29	-0.6
2,592,317	-	moxR	OKGIIK_12035	0.29	-1.0
2,592,317	-	moxR	OKGIIK_12035	0.29	-0.9
2,592,317	-	moxR	OKGIIK_12035	0.29	+0.6
2,592,915	+	moxR	OKGIIK_12035	0.89	-0.5
2,592,915	+	moxR	OKGIIK_12035	0.89	+0.1
2,592,915	+	moxR	OKGIIK_12035	0.89	+0.9
2,592,915	+	moxR	OKGIIK_12035	0.89	+0.6
2,592,916	-	moxR	OKGIIK_12035	0.89	-0.2
2,592,916	-	moxR	OKGIIK_12035	0.89	+0.7
2,592,916	-	moxR	OKGIIK_12035	0.89	-1.4
2,592,946	+				-0.4
2,593,027	+				+0.2
2,593,027	+				-1.4
2,593,027	+				+0.2
2,593,027	+				+0.6
2,593,027	+				+0.6
2,593,027	+				-0.8
2,593,027	+				-0.0
2,593,027	+				+0.4
2,593,028	-				-0.2
2,593,028	-				+0.9
2,593,028	-				-0.0
2,593,028	-				+0.6
2,593,028	-				-0.6
2,593,028	-				-0.6
2,593,028	-				-2.0
2,593,028	-				+0.2