Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_11005

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
2,354,729	+	cysQ	OKGIIK_10995	0.53	-0.5
2,354,729	+	cysQ	OKGIIK_10995	0.53	+1.3
2,354,729	+	cysQ	OKGIIK_10995	0.53	+1.1
2,354,729	+	cysQ	OKGIIK_10995	0.53	-0.1
2,354,729	+	cysQ	OKGIIK_10995	0.53	-0.6
2,354,729	+	cysQ	OKGIIK_10995	0.53	-1.9
2,354,729	+	cysQ	OKGIIK_10995	0.53	+1.0
2,354,729	+	cysQ	OKGIIK_10995	0.53	-1.9
2,354,729	+	cysQ	OKGIIK_10995	0.53	-1.5
2,354,729	+	cysQ	OKGIIK_10995	0.53	+0.5
2,354,729	+	cysQ	OKGIIK_10995	0.53	+0.9
2,354,729	+	cysQ	OKGIIK_10995	0.53	-1.1
2,354,729	+	cysQ	OKGIIK_10995	0.53	-1.9
2,354,729	+	cysQ	OKGIIK_10995	0.53	-1.9
2,354,729	+	cysQ	OKGIIK_10995	0.53	+0.3
2,354,729	+	cysQ	OKGIIK_10995	0.53	+0.9
2,354,729	+	cysQ	OKGIIK_10995	0.53	+0.3
2,354,729	+	cysQ	OKGIIK_10995	0.53	-0.7
2,354,730	-	cysQ	OKGIIK_10995	0.53	+2.1
2,354,730	-	cysQ	OKGIIK_10995	0.53	+0.4
2,354,730	-	cysQ	OKGIIK_10995	0.53	-1.1
2,354,730	-	cysQ	OKGIIK_10995	0.53	-1.9
2,354,730	-	cysQ	OKGIIK_10995	0.53	-0.1
2,354,730	-	cysQ	OKGIIK_10995	0.53	+0.5
2,354,730	-	cysQ	OKGIIK_10995	0.53	-1.0
2,354,730	-	cysQ	OKGIIK_10995	0.53	-1.1
2,354,730	-	cysQ	OKGIIK_10995	0.53	-1.5
2,354,730	-	cysQ	OKGIIK_10995	0.53	-0.1
2,354,730	-	cysQ	OKGIIK_10995	0.53	-1.1
2,354,730	-	cysQ	OKGIIK_10995	0.53	+0.8
2,354,730	-	cysQ	OKGIIK_10995	0.53	-1.1
2,354,730	-	cysQ	OKGIIK_10995	0.53	-0.1
2,354,730	-	cysQ	OKGIIK_10995	0.53	-1.1
2,354,730	-	cysQ	OKGIIK_10995	0.53	-0.3
2,354,730	-	cysQ	OKGIIK_10995	0.53	-3.6
2,354,730	-	cysQ	OKGIIK_10995	0.53	-0.5
2,354,730	-	cysQ	OKGIIK_10995	0.53	-0.7
2,354,864	+	cysQ	OKGIIK_10995	0.69	+0.3
2,354,864	+	cysQ	OKGIIK_10995	0.69	-0.4
2,354,864	+	cysQ	OKGIIK_10995	0.69	-0.2
2,354,865	-	cysQ	OKGIIK_10995	0.70	+0.8
2,354,865	-	cysQ	OKGIIK_10995	0.70	+0.9
2,355,038	+				-0.2
2,355,038	+				-1.5
2,355,038	+				-1.8
2,355,039	-				-1.2
2,355,039	-				+0.7
2,355,039	-				+1.3
2,355,039	-				+0.6
2,355,039	-				-1.1
2,355,039	-				+0.0
2,355,039	-				-1.2
2,355,139	+				+1.0
2,355,139	+				-1.1
2,355,139	+				-2.1
2,355,140	-				-0.1
2,355,140	-				+0.5
2,355,140	-				-2.3
2,355,140	-				-0.5
2,355,140	-				+0.4
2,355,277	+	nudE	OKGIIK_11000	0.30	-0.1
2,355,277	+	nudE	OKGIIK_11000	0.30	-0.5
2,355,277	+	nudE	OKGIIK_11000	0.30	-0.7
2,355,277	+	nudE	OKGIIK_11000	0.30	-0.7
2,355,278	-	nudE	OKGIIK_11000	0.30	-0.6
2,355,278	-	nudE	OKGIIK_11000	0.30	-0.3
2,355,319	+	nudE	OKGIIK_11000	0.37	-1.4
2,355,319	+	nudE	OKGIIK_11000	0.37	+0.5
2,355,319	+	nudE	OKGIIK_11000	0.37	+1.1
2,355,319	+	nudE	OKGIIK_11000	0.37	-0.7
2,355,319	+	nudE	OKGIIK_11000	0.37	-1.3
2,355,319	+	nudE	OKGIIK_11000	0.37	-1.3
2,355,319	+	nudE	OKGIIK_11000	0.37	-1.3
2,355,319	+	nudE	OKGIIK_11000	0.37	-0.5
2,355,319	+	nudE	OKGIIK_11000	0.37	+0.9
2,355,319	+	nudE	OKGIIK_11000	0.37	-0.3
2,355,319	+	nudE	OKGIIK_11000	0.37	-1.3
2,355,319	+	nudE	OKGIIK_11000	0.37	-2.2
2,355,319	+	nudE	OKGIIK_11000	0.37	+1.6
2,355,319	+	nudE	OKGIIK_11000	0.37	-0.5
2,355,319	+	nudE	OKGIIK_11000	0.37	-0.5
2,355,319	+	nudE	OKGIIK_11000	0.37	-2.1
2,355,319	+	nudE	OKGIIK_11000	0.37	-0.5
2,355,319	+	nudE	OKGIIK_11000	0.37	-1.5
2,355,319	+	nudE	OKGIIK_11000	0.37	+0.5
2,355,319	+	nudE	OKGIIK_11000	0.37	-1.2
2,355,319	+	nudE	OKGIIK_11000	0.37	+0.4
2,355,319	+	nudE	OKGIIK_11000	0.37	-1.9
2,355,319	+	nudE	OKGIIK_11000	0.37	-0.7
2,355,319	+	nudE	OKGIIK_11000	0.37	+1.3
2,355,319	+	nudE	OKGIIK_11000	0.37	-2.1
2,355,319	+	nudE	OKGIIK_11000	0.37	-0.5
2,355,319	+	nudE	OKGIIK_11000	0.37	+1.5
2,355,319	+	nudE	OKGIIK_11000	0.37	+0.1
2,355,319	+	nudE	OKGIIK_11000	0.37	-1.4
2,355,319	+	nudE	OKGIIK_11000	0.37	-0.7
2,355,319	+	nudE	OKGIIK_11000	0.37	-2.8
2,355,319	+	nudE	OKGIIK_11000	0.37	-0.1
2,355,320	-	nudE	OKGIIK_11000	0.37	-0.7
2,355,320	-	nudE	OKGIIK_11000	0.37	+0.1
2,355,320	-	nudE	OKGIIK_11000	0.37	+1.1
2,355,320	-	nudE	OKGIIK_11000	0.37	-1.9
2,355,320	-	nudE	OKGIIK_11000	0.37	-0.0
2,355,320	-	nudE	OKGIIK_11000	0.37	+0.1
2,355,320	-	nudE	OKGIIK_11000	0.37	-0.7
2,355,320	-	nudE	OKGIIK_11000	0.37	-0.1
2,355,320	-	nudE	OKGIIK_11000	0.37	-1.9
2,355,320	-	nudE	OKGIIK_11000	0.37	-1.9
2,355,320	-	nudE	OKGIIK_11000	0.37	+0.3
2,355,320	-	nudE	OKGIIK_11000	0.37	+0.4
2,355,320	-	nudE	OKGIIK_11000	0.37	-1.5
2,355,320	-	nudE	OKGIIK_11000	0.37	+0.9
2,355,320	-	nudE	OKGIIK_11000	0.37	+0.1
2,355,320	-	nudE	OKGIIK_11000	0.37	+0.7
2,355,320	-	nudE	OKGIIK_11000	0.37	-0.7
2,355,320	-	nudE	OKGIIK_11000	0.37	-0.1
2,355,320	-	nudE	OKGIIK_11000	0.37	-0.7
2,355,320	-	nudE	OKGIIK_11000	0.37	-0.7
2,355,320	-	nudE	OKGIIK_11000	0.37	-1.1
2,355,320	-	nudE	OKGIIK_11000	0.37	+0.3
2,355,320	-	nudE	OKGIIK_11000	0.37	-0.7
2,355,320	-	nudE	OKGIIK_11000	0.37	+0.0
2,355,320	-	nudE	OKGIIK_11000	0.37	+1.0
2,355,320	-	nudE	OKGIIK_11000	0.37	+0.3
2,355,320	-	nudE	OKGIIK_11000	0.37	-1.5
2,355,320	-	nudE	OKGIIK_11000	0.37	+0.7
2,355,320	-	nudE	OKGIIK_11000	0.37	-0.1
2,355,320	-	nudE	OKGIIK_11000	0.37	-0.2
2,355,457	+	nudE	OKGIIK_11000	0.62	-0.5
2,355,457	+	nudE	OKGIIK_11000	0.62	+0.2
2,355,478	+	nudE	OKGIIK_11000	0.66	+0.4
2,355,479	-	nudE	OKGIIK_11000	0.66	+0.3
2,355,562	+	nudE	OKGIIK_11000	0.81	-0.3
2,355,562	+	nudE	OKGIIK_11000	0.81	-1.1
2,355,562	+	nudE	OKGIIK_11000	0.81	+0.3
2,355,562	+	nudE	OKGIIK_11000	0.81	-0.3
2,355,562	+	nudE	OKGIIK_11000	0.81	-2.7
2,355,562	+	nudE	OKGIIK_11000	0.81	+0.7
2,355,562	+	nudE	OKGIIK_11000	0.81	+0.8
2,355,562	+	nudE	OKGIIK_11000	0.81	+0.1
2,355,562	+	nudE	OKGIIK_11000	0.81	+1.5
2,355,562	+	nudE	OKGIIK_11000	0.81	-1.1
2,355,563	-	nudE	OKGIIK_11000	0.81	-0.3
2,355,563	-	nudE	OKGIIK_11000	0.81	-0.7
2,355,563	-	nudE	OKGIIK_11000	0.81	-0.7
2,355,563	-	nudE	OKGIIK_11000	0.81	-0.3
2,355,563	-	nudE	OKGIIK_11000	0.81	-2.7
2,355,563	-	nudE	OKGIIK_11000	0.81	+0.4
2,355,563	-	nudE	OKGIIK_11000	0.81	-2.2
2,355,563	-	nudE	OKGIIK_11000	0.81	-1.5
2,355,563	-	nudE	OKGIIK_11000	0.81	-1.3
2,355,563	-	nudE	OKGIIK_11000	0.81	-1.4
2,355,563	-	nudE	OKGIIK_11000	0.81	-1.1
2,355,563	-	nudE	OKGIIK_11000	0.81	-0.1
2,355,563	-	nudE	OKGIIK_11000	0.81	+0.0
2,355,563	-	nudE	OKGIIK_11000	0.81	+0.7
2,355,563	-	nudE	OKGIIK_11000	0.81	-0.1
2,355,563	-	nudE	OKGIIK_11000	0.81	-2.3
2,355,657	+				-1.5
2,355,657	+				-1.1
2,355,658	-				-0.9
2,355,658	-				-0.1
2,355,658	-				-0.4
2,355,658	-				-0.1
2,355,658	-				-0.3
2,355,658	-				-0.5
2,355,658	-				-1.9
2,355,658	-				-1.3
2,355,658	-				+0.6
2,355,679	+				+0.3
2,355,679	+				-1.5
2,355,679	+				-1.2
2,355,679	+				+0.3
2,355,679	+				+0.3
2,355,679	+				-1.1
2,355,679	+				+1.6
2,355,679	+				-0.2
2,355,679	+				-0.5
2,355,680	-				-2.4
2,355,680	-				+0.9
2,355,680	-				+1.6
2,355,680	-				+0.6
2,355,680	-				-1.1
2,355,897	+	suhB	OKGIIK_11005	0.26	-2.3
2,355,897	+	suhB	OKGIIK_11005	0.26	-1.3
2,355,897	+	suhB	OKGIIK_11005	0.26	-1.5
2,355,897	+	suhB	OKGIIK_11005	0.26	-1.7
2,355,897	+	suhB	OKGIIK_11005	0.26	-0.7
2,355,898	-	suhB	OKGIIK_11005	0.27	-1.3
2,356,081	+	suhB	OKGIIK_11005	0.50	-1.9
2,356,101	+	suhB	OKGIIK_11005	0.53	-1.5
2,356,101	+	suhB	OKGIIK_11005	0.53	-0.2
2,356,102	-	suhB	OKGIIK_11005	0.53	-1.1
2,356,102	-	suhB	OKGIIK_11005	0.53	-0.7
2,356,266	+	suhB	OKGIIK_11005	0.74	-1.4
2,356,267	-	suhB	OKGIIK_11005	0.74	-1.0
2,356,390	-	suhB	OKGIIK_11005	0.90	-0.7
2,356,390	-	suhB	OKGIIK_11005	0.90	-0.7
2,356,390	-	suhB	OKGIIK_11005	0.90	-2.4
2,356,390	-	suhB	OKGIIK_11005	0.90	-2.2
2,356,390	-	suhB	OKGIIK_11005	0.90	-0.7
2,356,775	-		OKGIIK_11010	0.37	+0.3
2,356,899	+		OKGIIK_11010	0.53	-0.3
2,356,899	+		OKGIIK_11010	0.53	-0.7
2,356,899	+		OKGIIK_11010	0.53	-0.3
2,356,899	+		OKGIIK_11010	0.53	-2.1
2,356,899	+		OKGIIK_11010	0.53	-0.6
2,356,899	+		OKGIIK_11010	0.53	-0.8
2,356,900	-		OKGIIK_11010	0.53	-0.7
2,356,900	-		OKGIIK_11010	0.53	-0.3
2,356,900	-		OKGIIK_11010	0.53	-0.3
2,356,900	-		OKGIIK_11010	0.53	-1.3
2,356,900	-		OKGIIK_11010	0.53	-0.9
2,356,900	-		OKGIIK_11010	0.53	+1.3
2,356,900	-		OKGIIK_11010	0.53	+0.4
2,357,333	+				-0.7
2,357,333	+				-1.7
2,357,334	-				-2.1
2,357,334	-				-1.6
2,357,334	-				+0.6