Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_07685

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOKGIIK_07680 and ccoS overlap by 4 nucleotidesccoS and OKGIIK_07690 overlap by 104 nucleotides OKGIIK_07680: OKGIIK_07680 - ATPase P, at 1,696,852 to 1,699,110 _07680 OKGIIK_07685: ccoS - cbb3-type cytochrome oxidase assembly protein CcoS, at 1,699,107 to 1,699,349 ccoS OKGIIK_07690: OKGIIK_07690 - Acetyl-CoA hydrolase, at 1,699,246 to 1,701,243 _07690 Position (kb) 1699 1700Strain fitness (log2 ratio) -1 0 1at 1699.747 kb on + strand, within OKGIIK_07690at 1699.748 kb on + strand, within OKGIIK_07690at 1699.748 kb on + strand, within OKGIIK_07690at 1699.749 kb on - strand, within OKGIIK_07690at 1699.749 kb on - strand, within OKGIIK_07690at 1699.749 kb on - strand, within OKGIIK_07690at 1699.749 kb on - strand, within OKGIIK_07690at 1699.799 kb on + strand, within OKGIIK_07690at 1699.907 kb on + strand, within OKGIIK_07690at 1699.907 kb on + strand, within OKGIIK_07690at 1699.907 kb on + strand, within OKGIIK_07690at 1699.907 kb on + strand, within OKGIIK_07690at 1699.908 kb on - strand, within OKGIIK_07690at 1699.908 kb on - strand, within OKGIIK_07690at 1699.908 kb on - strand, within OKGIIK_07690at 1699.908 kb on - strand, within OKGIIK_07690at 1699.908 kb on - strand, within OKGIIK_07690at 1699.908 kb on - strand, within OKGIIK_07690at 1699.908 kb on - strand, within OKGIIK_07690at 1699.908 kb on - strand, within OKGIIK_07690at 1700.048 kb on + strand, within OKGIIK_07690at 1700.049 kb on - strand, within OKGIIK_07690at 1700.126 kb on + strand, within OKGIIK_07690at 1700.126 kb on + strand, within OKGIIK_07690at 1700.126 kb on + strand, within OKGIIK_07690at 1700.127 kb on - strand, within OKGIIK_07690at 1700.127 kb on - strand, within OKGIIK_07690at 1700.127 kb on - strand, within OKGIIK_07690at 1700.165 kb on + strand, within OKGIIK_07690at 1700.165 kb on + strand, within OKGIIK_07690at 1700.165 kb on + strand, within OKGIIK_07690at 1700.165 kb on + strand, within OKGIIK_07690at 1700.165 kb on + strand, within OKGIIK_07690at 1700.165 kb on + strand, within OKGIIK_07690at 1700.166 kb on - strand, within OKGIIK_07690at 1700.166 kb on - strand, within OKGIIK_07690at 1700.306 kb on + strand, within OKGIIK_07690

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
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1,699,747 + OKGIIK_07690 0.25 +0.0
1,699,748 + OKGIIK_07690 0.25 +1.3
1,699,748 + OKGIIK_07690 0.25 +0.6
1,699,749 - OKGIIK_07690 0.25 -0.6
1,699,749 - OKGIIK_07690 0.25 +0.5
1,699,749 - OKGIIK_07690 0.25 +0.9
1,699,749 - OKGIIK_07690 0.25 +1.4
1,699,799 + OKGIIK_07690 0.28 +1.6
1,699,907 + OKGIIK_07690 0.33 -0.5
1,699,907 + OKGIIK_07690 0.33 +0.7
1,699,907 + OKGIIK_07690 0.33 +0.9
1,699,907 + OKGIIK_07690 0.33 -0.0
1,699,908 - OKGIIK_07690 0.33 +0.9
1,699,908 - OKGIIK_07690 0.33 -0.6
1,699,908 - OKGIIK_07690 0.33 -0.2
1,699,908 - OKGIIK_07690 0.33 +0.4
1,699,908 - OKGIIK_07690 0.33 +1.4
1,699,908 - OKGIIK_07690 0.33 +0.4
1,699,908 - OKGIIK_07690 0.33 +1.0
1,699,908 - OKGIIK_07690 0.33 -0.9
1,700,048 + OKGIIK_07690 0.40 -1.2
1,700,049 - OKGIIK_07690 0.40 +0.0
1,700,126 + OKGIIK_07690 0.44 -0.3
1,700,126 + OKGIIK_07690 0.44 -0.3
1,700,126 + OKGIIK_07690 0.44 +0.4
1,700,127 - OKGIIK_07690 0.44 +0.3
1,700,127 - OKGIIK_07690 0.44 -0.5
1,700,127 - OKGIIK_07690 0.44 -1.0
1,700,165 + OKGIIK_07690 0.46 +1.4
1,700,165 + OKGIIK_07690 0.46 +0.4
1,700,165 + OKGIIK_07690 0.46 +0.4
1,700,165 + OKGIIK_07690 0.46 +0.7
1,700,165 + OKGIIK_07690 0.46 +0.4
1,700,165 + OKGIIK_07690 0.46 -0.0
1,700,166 - OKGIIK_07690 0.46 +0.9
1,700,166 - OKGIIK_07690 0.46 -0.3
1,700,306 + OKGIIK_07690 0.53 +0.0

Or see this region's nucleotide sequence