Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04038 and MPMX19_04039 are separated by 55 nucleotides MPMX19_04039 and MPMX19_04040 are separated by 8 nucleotides
MPMX19_04038: MPMX19_04038 - 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, at 337,585 to 339,432
_04038
MPMX19_04039: MPMX19_04039 - Inosose dehydratase, at 339,488 to 340,378
_04039
MPMX19_04040: MPMX19_04040 - Putative 3-oxopropanoate dehydrogenase, at 340,387 to 341,892
_04040
Position (kb) 339
340
341 Strain fitness (log2 ratio) -2
-1
0
1
2 at 338.511 kb on + strand, within MPMX19_04038 at 338.511 kb on + strand, within MPMX19_04038 at 338.511 kb on + strand, within MPMX19_04038 at 338.511 kb on + strand, within MPMX19_04038 at 338.512 kb on - strand, within MPMX19_04038 at 338.512 kb on - strand, within MPMX19_04038 at 338.512 kb on - strand, within MPMX19_04038 at 338.899 kb on + strand, within MPMX19_04038 at 338.899 kb on + strand, within MPMX19_04038 at 338.900 kb on - strand, within MPMX19_04038 at 338.900 kb on - strand, within MPMX19_04038 at 338.900 kb on - strand, within MPMX19_04038 at 338.900 kb on - strand, within MPMX19_04038 at 338.920 kb on + strand, within MPMX19_04038 at 338.998 kb on + strand, within MPMX19_04038 at 338.998 kb on + strand, within MPMX19_04038 at 338.998 kb on + strand, within MPMX19_04038 at 338.998 kb on + strand, within MPMX19_04038 at 338.998 kb on + strand, within MPMX19_04038 at 338.998 kb on + strand, within MPMX19_04038 at 338.998 kb on + strand, within MPMX19_04038 at 338.998 kb on + strand, within MPMX19_04038 at 338.998 kb on + strand, within MPMX19_04038 at 338.998 kb on + strand, within MPMX19_04038 at 338.998 kb on + strand, within MPMX19_04038 at 338.999 kb on - strand, within MPMX19_04038 at 338.999 kb on - strand, within MPMX19_04038 at 338.999 kb on - strand, within MPMX19_04038 at 338.999 kb on - strand, within MPMX19_04038 at 338.999 kb on - strand, within MPMX19_04038 at 338.999 kb on - strand, within MPMX19_04038 at 338.999 kb on - strand, within MPMX19_04038 at 338.999 kb on - strand, within MPMX19_04038 at 338.999 kb on - strand, within MPMX19_04038 at 338.999 kb on - strand, within MPMX19_04038 at 338.999 kb on - strand, within MPMX19_04038 at 338.999 kb on - strand, within MPMX19_04038 at 338.999 kb on - strand, within MPMX19_04038 at 338.999 kb on - strand, within MPMX19_04038 at 338.999 kb on - strand, within MPMX19_04038 at 338.999 kb on - strand, within MPMX19_04038 at 338.999 kb on - strand, within MPMX19_04038 at 339.079 kb on + strand, within MPMX19_04038 at 339.079 kb on + strand, within MPMX19_04038 at 339.079 kb on + strand, within MPMX19_04038 at 339.079 kb on + strand, within MPMX19_04038 at 339.079 kb on + strand, within MPMX19_04038 at 339.079 kb on + strand, within MPMX19_04038 at 339.079 kb on + strand, within MPMX19_04038 at 339.080 kb on - strand, within MPMX19_04038 at 339.080 kb on - strand, within MPMX19_04038 at 339.080 kb on - strand, within MPMX19_04038 at 339.134 kb on + strand, within MPMX19_04038 at 339.134 kb on + strand, within MPMX19_04038 at 339.134 kb on + strand, within MPMX19_04038 at 339.134 kb on + strand, within MPMX19_04038 at 339.135 kb on - strand, within MPMX19_04038 at 339.135 kb on - strand, within MPMX19_04038 at 339.135 kb on - strand, within MPMX19_04038 at 339.151 kb on + strand, within MPMX19_04038 at 339.151 kb on + strand, within MPMX19_04038 at 339.152 kb on - strand, within MPMX19_04038 at 339.152 kb on - strand, within MPMX19_04038 at 339.152 kb on - strand, within MPMX19_04038 at 339.152 kb on - strand, within MPMX19_04038 at 339.152 kb on - strand, within MPMX19_04038 at 339.283 kb on + strand at 339.283 kb on + strand at 339.283 kb on + strand at 339.283 kb on + strand at 339.283 kb on + strand at 339.283 kb on + strand at 339.283 kb on + strand at 339.283 kb on + strand at 339.283 kb on + strand at 339.283 kb on + strand at 339.283 kb on + strand at 339.284 kb on - strand at 339.284 kb on - strand at 339.284 kb on - strand at 339.284 kb on - strand at 339.284 kb on - strand at 339.284 kb on - strand at 339.284 kb on - strand at 339.284 kb on - strand at 339.284 kb on - strand at 339.284 kb on - strand at 339.284 kb on - strand at 339.284 kb on - strand at 339.284 kb on - strand at 339.284 kb on - strand at 339.284 kb on - strand at 339.284 kb on - strand at 339.284 kb on - strand at 339.400 kb on + strand at 339.400 kb on + strand at 339.400 kb on + strand at 339.400 kb on + strand at 339.400 kb on + strand at 339.400 kb on + strand at 339.400 kb on + strand at 339.401 kb on - strand at 339.401 kb on - strand at 339.401 kb on - strand at 339.401 kb on - strand at 339.401 kb on - strand at 339.535 kb on + strand at 339.535 kb on + strand at 339.535 kb on + strand at 339.535 kb on + strand at 339.535 kb on + strand at 339.535 kb on + strand at 339.535 kb on + strand at 339.536 kb on - strand at 339.536 kb on - strand at 339.536 kb on - strand at 339.536 kb on - strand at 339.536 kb on - strand at 339.536 kb on - strand at 339.536 kb on - strand at 339.536 kb on - strand at 339.536 kb on - strand at 339.695 kb on + strand, within MPMX19_04039 at 339.695 kb on + strand, within MPMX19_04039 at 339.696 kb on - strand, within MPMX19_04039 at 339.696 kb on - strand, within MPMX19_04039 at 339.696 kb on - strand, within MPMX19_04039 at 339.696 kb on - strand, within MPMX19_04039 at 339.911 kb on + strand, within MPMX19_04039 at 339.911 kb on + strand, within MPMX19_04039 at 339.911 kb on + strand, within MPMX19_04039 at 339.911 kb on + strand, within MPMX19_04039 at 339.912 kb on - strand, within MPMX19_04039 at 339.912 kb on - strand, within MPMX19_04039 at 339.912 kb on - strand, within MPMX19_04039 at 339.912 kb on - strand, within MPMX19_04039 at 339.912 kb on - strand, within MPMX19_04039 at 339.912 kb on - strand, within MPMX19_04039 at 339.941 kb on + strand, within MPMX19_04039 at 339.941 kb on + strand, within MPMX19_04039 at 339.941 kb on + strand, within MPMX19_04039 at 339.941 kb on + strand, within MPMX19_04039 at 339.947 kb on + strand, within MPMX19_04039 at 339.947 kb on + strand, within MPMX19_04039 at 339.947 kb on + strand, within MPMX19_04039 at 339.947 kb on + strand, within MPMX19_04039 at 339.947 kb on + strand, within MPMX19_04039 at 339.947 kb on + strand, within MPMX19_04039 at 339.948 kb on - strand, within MPMX19_04039 at 339.948 kb on - strand, within MPMX19_04039 at 339.948 kb on - strand, within MPMX19_04039 at 339.948 kb on - strand, within MPMX19_04039 at 339.948 kb on - strand, within MPMX19_04039 at 339.948 kb on - strand, within MPMX19_04039 at 339.948 kb on - strand, within MPMX19_04039 at 339.948 kb on - strand, within MPMX19_04039 at 340.259 kb on + strand, within MPMX19_04039 at 340.260 kb on - strand, within MPMX19_04039 at 340.322 kb on + strand at 340.322 kb on + strand at 340.322 kb on + strand at 340.322 kb on + strand at 340.322 kb on + strand at 340.322 kb on + strand at 340.322 kb on + strand at 340.322 kb on + strand at 340.322 kb on + strand at 340.322 kb on + strand at 340.322 kb on + strand at 340.322 kb on + strand at 340.322 kb on + strand at 340.322 kb on + strand at 340.323 kb on - strand at 340.323 kb on - strand at 340.323 kb on - strand at 340.323 kb on - strand at 340.323 kb on - strand at 340.323 kb on - strand at 340.323 kb on - strand at 340.323 kb on - strand at 340.323 kb on - strand at 340.323 kb on - strand at 340.323 kb on - strand at 340.367 kb on + strand at 340.368 kb on - strand at 340.368 kb on - strand at 341.083 kb on + strand, within MPMX19_04040 at 341.083 kb on + strand, within MPMX19_04040 at 341.083 kb on + strand, within MPMX19_04040 at 341.083 kb on + strand, within MPMX19_04040 at 341.083 kb on + strand, within MPMX19_04040 at 341.083 kb on + strand, within MPMX19_04040 at 341.083 kb on + strand, within MPMX19_04040 at 341.083 kb on + strand, within MPMX19_04040 at 341.083 kb on + strand, within MPMX19_04040 at 341.083 kb on + strand, within MPMX19_04040 at 341.083 kb on + strand, within MPMX19_04040 at 341.083 kb on + strand, within MPMX19_04040 at 341.083 kb on + strand, within MPMX19_04040 at 341.083 kb on + strand, within MPMX19_04040 at 341.083 kb on + strand, within MPMX19_04040 at 341.084 kb on - strand, within MPMX19_04040 at 341.084 kb on - strand, within MPMX19_04040 at 341.084 kb on - strand, within MPMX19_04040 at 341.084 kb on - strand, within MPMX19_04040 at 341.084 kb on - strand, within MPMX19_04040 at 341.084 kb on - strand, within MPMX19_04040 at 341.084 kb on - strand, within MPMX19_04040 at 341.084 kb on - strand, within MPMX19_04040 at 341.084 kb on - strand, within MPMX19_04040 at 341.084 kb on - strand, within MPMX19_04040 at 341.084 kb on - strand, within MPMX19_04040 at 341.084 kb on - strand, within MPMX19_04040 at 341.084 kb on - strand, within MPMX19_04040 at 341.089 kb on + strand, within MPMX19_04040 at 341.089 kb on + strand, within MPMX19_04040 at 341.089 kb on + strand, within MPMX19_04040 at 341.089 kb on + strand, within MPMX19_04040 at 341.089 kb on + strand, within MPMX19_04040 at 341.089 kb on + strand, within MPMX19_04040 at 341.089 kb on + strand, within MPMX19_04040 at 341.089 kb on + strand, within MPMX19_04040 at 341.089 kb on + strand, within MPMX19_04040 at 341.089 kb on + strand, within MPMX19_04040 at 341.089 kb on + strand, within MPMX19_04040 at 341.089 kb on + strand, within MPMX19_04040 at 341.089 kb on + strand, within MPMX19_04040 at 341.089 kb on + strand, within MPMX19_04040 at 341.089 kb on + strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.090 kb on - strand, within MPMX19_04040 at 341.209 kb on + strand, within MPMX19_04040 at 341.210 kb on - strand, within MPMX19_04040 at 341.210 kb on - strand, within MPMX19_04040 at 341.210 kb on - strand, within MPMX19_04040 at 341.210 kb on - strand, within MPMX19_04040
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 338,511 + MPMX19_04038 0.50 -0.3 338,511 + MPMX19_04038 0.50 -0.1 338,511 + MPMX19_04038 0.50 -0.3 338,511 + MPMX19_04038 0.50 -1.4 338,512 - MPMX19_04038 0.50 -0.1 338,512 - MPMX19_04038 0.50 +0.2 338,512 - MPMX19_04038 0.50 +0.0 338,899 + MPMX19_04038 0.71 +0.6 338,899 + MPMX19_04038 0.71 -0.4 338,900 - MPMX19_04038 0.71 -0.7 338,900 - MPMX19_04038 0.71 +0.9 338,900 - MPMX19_04038 0.71 -0.4 338,900 - MPMX19_04038 0.71 -0.6 338,920 + MPMX19_04038 0.72 +0.2 338,998 + MPMX19_04038 0.76 -0.5 338,998 + MPMX19_04038 0.76 -1.9 338,998 + MPMX19_04038 0.76 -1.0 338,998 + MPMX19_04038 0.76 -0.0 338,998 + MPMX19_04038 0.76 -1.1 338,998 + MPMX19_04038 0.76 +0.1 338,998 + MPMX19_04038 0.76 +0.0 338,998 + MPMX19_04038 0.76 +0.3 338,998 + MPMX19_04038 0.76 +0.2 338,998 + MPMX19_04038 0.76 -0.1 338,998 + MPMX19_04038 0.76 +1.3 338,999 - MPMX19_04038 0.77 -0.5 338,999 - MPMX19_04038 0.77 -0.2 338,999 - MPMX19_04038 0.77 -0.5 338,999 - MPMX19_04038 0.77 -0.9 338,999 - MPMX19_04038 0.77 -0.4 338,999 - MPMX19_04038 0.77 -0.9 338,999 - MPMX19_04038 0.77 -0.9 338,999 - MPMX19_04038 0.77 -0.7 338,999 - MPMX19_04038 0.77 +0.8 338,999 - MPMX19_04038 0.77 -0.5 338,999 - MPMX19_04038 0.77 +0.1 338,999 - MPMX19_04038 0.77 -0.2 338,999 - MPMX19_04038 0.77 +0.6 338,999 - MPMX19_04038 0.77 -0.5 338,999 - MPMX19_04038 0.77 -0.4 338,999 - MPMX19_04038 0.77 -1.1 338,999 - MPMX19_04038 0.77 +0.2 339,079 + MPMX19_04038 0.81 +0.4 339,079 + MPMX19_04038 0.81 -0.4 339,079 + MPMX19_04038 0.81 -1.0 339,079 + MPMX19_04038 0.81 +1.9 339,079 + MPMX19_04038 0.81 -0.9 339,079 + MPMX19_04038 0.81 +0.4 339,079 + MPMX19_04038 0.81 -0.3 339,080 - MPMX19_04038 0.81 -1.6 339,080 - MPMX19_04038 0.81 +1.2 339,080 - MPMX19_04038 0.81 +0.9 339,134 + MPMX19_04038 0.84 +0.0 339,134 + MPMX19_04038 0.84 -0.5 339,134 + MPMX19_04038 0.84 -0.6 339,134 + MPMX19_04038 0.84 +0.5 339,135 - MPMX19_04038 0.84 +0.1 339,135 - MPMX19_04038 0.84 -0.4 339,135 - MPMX19_04038 0.84 -1.0 339,151 + MPMX19_04038 0.85 -0.1 339,151 + MPMX19_04038 0.85 -1.7 339,152 - MPMX19_04038 0.85 +0.9 339,152 - MPMX19_04038 0.85 -0.7 339,152 - MPMX19_04038 0.85 +0.6 339,152 - MPMX19_04038 0.85 -1.8 339,152 - MPMX19_04038 0.85 +0.6 339,283 + -0.2 339,283 + +0.5 339,283 + -1.7 339,283 + +0.7 339,283 + +0.1 339,283 + -1.2 339,283 + -0.0 339,283 + -0.6 339,283 + -0.1 339,283 + +0.4 339,283 + -0.6 339,284 - -0.0 339,284 - -0.6 339,284 - +0.7 339,284 - -0.1 339,284 - -0.4 339,284 - +0.7 339,284 - -0.6 339,284 - +0.2 339,284 - -0.1 339,284 - +0.2 339,284 - +0.7 339,284 - -0.3 339,284 - -1.0 339,284 - +0.5 339,284 - +0.8 339,284 - +0.4 339,284 - +0.0 339,400 + +0.9 339,400 + -0.6 339,400 + +0.1 339,400 + +0.4 339,400 + -1.8 339,400 + +0.2 339,400 + -0.5 339,401 - +0.4 339,401 - -0.6 339,401 - -0.2 339,401 - +1.4 339,401 - +0.7 339,535 + +0.3 339,535 + -2.2 339,535 + +0.4 339,535 + +0.4 339,535 + +1.0 339,535 + -0.2 339,535 + +0.1 339,536 - -0.2 339,536 - -0.9 339,536 - -0.4 339,536 - +0.1 339,536 - -2.0 339,536 - -0.5 339,536 - -1.1 339,536 - -0.9 339,536 - -0.4 339,695 + MPMX19_04039 0.23 +0.3 339,695 + MPMX19_04039 0.23 +1.6 339,696 - MPMX19_04039 0.23 -1.9 339,696 - MPMX19_04039 0.23 +0.7 339,696 - MPMX19_04039 0.23 +0.0 339,696 - MPMX19_04039 0.23 -1.4 339,911 + MPMX19_04039 0.47 +1.4 339,911 + MPMX19_04039 0.47 -1.0 339,911 + MPMX19_04039 0.47 +0.4 339,911 + MPMX19_04039 0.47 -0.3 339,912 - MPMX19_04039 0.48 +1.0 339,912 - MPMX19_04039 0.48 -0.1 339,912 - MPMX19_04039 0.48 -0.1 339,912 - MPMX19_04039 0.48 +1.0 339,912 - MPMX19_04039 0.48 +0.6 339,912 - MPMX19_04039 0.48 -0.4 339,941 + MPMX19_04039 0.51 +0.4 339,941 + MPMX19_04039 0.51 +1.6 339,941 + MPMX19_04039 0.51 +0.5 339,941 + MPMX19_04039 0.51 +0.0 339,947 + MPMX19_04039 0.52 +0.6 339,947 + MPMX19_04039 0.52 +0.9 339,947 + MPMX19_04039 0.52 -0.1 339,947 + MPMX19_04039 0.52 -0.6 339,947 + MPMX19_04039 0.52 +0.3 339,947 + MPMX19_04039 0.52 -1.3 339,948 - MPMX19_04039 0.52 +0.3 339,948 - MPMX19_04039 0.52 -0.2 339,948 - MPMX19_04039 0.52 -0.2 339,948 - MPMX19_04039 0.52 -1.4 339,948 - MPMX19_04039 0.52 +1.6 339,948 - MPMX19_04039 0.52 -0.4 339,948 - MPMX19_04039 0.52 +0.0 339,948 - MPMX19_04039 0.52 -2.1 340,259 + MPMX19_04039 0.87 +0.6 340,260 - MPMX19_04039 0.87 -0.7 340,322 + -1.9 340,322 + +0.0 340,322 + -0.5 340,322 + -0.7 340,322 + -0.1 340,322 + +0.0 340,322 + +1.0 340,322 + -0.4 340,322 + -0.3 340,322 + +1.6 340,322 + +0.0 340,322 + +0.2 340,322 + +0.5 340,322 + +0.0 340,323 - -0.7 340,323 - +0.1 340,323 - -1.6 340,323 - +0.6 340,323 - -0.6 340,323 - +0.0 340,323 - -0.7 340,323 - +0.0 340,323 - -0.5 340,323 - +0.0 340,323 - -0.3 340,367 + -0.3 340,368 - -0.4 340,368 - +0.6 341,083 + MPMX19_04040 0.46 +0.7 341,083 + MPMX19_04040 0.46 +0.3 341,083 + MPMX19_04040 0.46 +0.0 341,083 + MPMX19_04040 0.46 -0.1 341,083 + MPMX19_04040 0.46 +0.8 341,083 + MPMX19_04040 0.46 +0.4 341,083 + MPMX19_04040 0.46 -0.9 341,083 + MPMX19_04040 0.46 -0.7 341,083 + MPMX19_04040 0.46 +0.8 341,083 + MPMX19_04040 0.46 -0.7 341,083 + MPMX19_04040 0.46 +0.2 341,083 + MPMX19_04040 0.46 -0.1 341,083 + MPMX19_04040 0.46 -0.9 341,083 + MPMX19_04040 0.46 -0.5 341,083 + MPMX19_04040 0.46 -1.6 341,084 - MPMX19_04040 0.46 +0.4 341,084 - MPMX19_04040 0.46 +0.1 341,084 - MPMX19_04040 0.46 -0.5 341,084 - MPMX19_04040 0.46 -2.2 341,084 - MPMX19_04040 0.46 +0.1 341,084 - MPMX19_04040 0.46 -1.3 341,084 - MPMX19_04040 0.46 -0.4 341,084 - MPMX19_04040 0.46 -2.4 341,084 - MPMX19_04040 0.46 +1.2 341,084 - MPMX19_04040 0.46 +0.1 341,084 - MPMX19_04040 0.46 -0.6 341,084 - MPMX19_04040 0.46 +0.2 341,084 - MPMX19_04040 0.46 -0.2 341,089 + MPMX19_04040 0.47 +0.2 341,089 + MPMX19_04040 0.47 +0.4 341,089 + MPMX19_04040 0.47 +0.6 341,089 + MPMX19_04040 0.47 +1.6 341,089 + MPMX19_04040 0.47 +0.1 341,089 + MPMX19_04040 0.47 -0.5 341,089 + MPMX19_04040 0.47 +0.1 341,089 + MPMX19_04040 0.47 -0.3 341,089 + MPMX19_04040 0.47 +0.0 341,089 + MPMX19_04040 0.47 -0.7 341,089 + MPMX19_04040 0.47 +0.4 341,089 + MPMX19_04040 0.47 -0.6 341,089 + MPMX19_04040 0.47 -0.7 341,089 + MPMX19_04040 0.47 +0.9 341,089 + MPMX19_04040 0.47 -0.7 341,090 - MPMX19_04040 0.47 -1.0 341,090 - MPMX19_04040 0.47 +1.9 341,090 - MPMX19_04040 0.47 -0.4 341,090 - MPMX19_04040 0.47 +0.6 341,090 - MPMX19_04040 0.47 -0.8 341,090 - MPMX19_04040 0.47 +0.7 341,090 - MPMX19_04040 0.47 +0.2 341,090 - MPMX19_04040 0.47 +0.0 341,090 - MPMX19_04040 0.47 +1.7 341,090 - MPMX19_04040 0.47 +0.6 341,090 - MPMX19_04040 0.47 -0.6 341,090 - MPMX19_04040 0.47 +0.4 341,090 - MPMX19_04040 0.47 +0.6 341,090 - MPMX19_04040 0.47 -2.2 341,090 - MPMX19_04040 0.47 +0.3 341,090 - MPMX19_04040 0.47 -1.0 341,090 - MPMX19_04040 0.47 -1.4 341,090 - MPMX19_04040 0.47 -2.0 341,090 - MPMX19_04040 0.47 -1.0 341,090 - MPMX19_04040 0.47 +1.9 341,090 - MPMX19_04040 0.47 -1.0 341,209 + MPMX19_04040 0.55 -0.5 341,210 - MPMX19_04040 0.55 +0.4 341,210 - MPMX19_04040 0.55 -0.2 341,210 - MPMX19_04040 0.55 -0.7 341,210 - MPMX19_04040 0.55 -0.4
Or see this region's nucleotide sequence