Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03203 and MPMX19_03204 are separated by 175 nucleotides MPMX19_03204 and MPMX19_03205 are separated by 228 nucleotides
MPMX19_03203: MPMX19_03203 - hypothetical protein, at 500,875 to 501,909
_03203
MPMX19_03204: MPMX19_03204 - IS110 family transposase ISMno25, at 502,085 to 503,260
_03204
MPMX19_03205: MPMX19_03205 - IS5 family transposase ISAzs10, at 503,489 to 504,565
_03205
Position (kb) 502
503
504 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 501.168 kb on + strand, within MPMX19_03203 at 501.169 kb on - strand, within MPMX19_03203 at 501.169 kb on - strand, within MPMX19_03203 at 501.448 kb on + strand, within MPMX19_03203 at 501.448 kb on + strand, within MPMX19_03203 at 501.448 kb on + strand, within MPMX19_03203 at 501.448 kb on + strand, within MPMX19_03203 at 501.448 kb on + strand, within MPMX19_03203 at 501.546 kb on + strand, within MPMX19_03203 at 501.548 kb on + strand, within MPMX19_03203 at 501.548 kb on + strand, within MPMX19_03203 at 501.549 kb on - strand, within MPMX19_03203 at 501.549 kb on - strand, within MPMX19_03203 at 501.570 kb on + strand, within MPMX19_03203 at 501.634 kb on + strand, within MPMX19_03203 at 501.634 kb on + strand, within MPMX19_03203 at 501.634 kb on + strand, within MPMX19_03203 at 501.634 kb on + strand, within MPMX19_03203 at 501.634 kb on + strand, within MPMX19_03203 at 501.634 kb on + strand, within MPMX19_03203 at 501.634 kb on + strand, within MPMX19_03203 at 501.634 kb on + strand, within MPMX19_03203 at 501.634 kb on + strand, within MPMX19_03203 at 501.635 kb on - strand, within MPMX19_03203 at 501.635 kb on - strand, within MPMX19_03203 at 501.635 kb on - strand, within MPMX19_03203 at 501.635 kb on - strand, within MPMX19_03203 at 501.635 kb on - strand, within MPMX19_03203 at 501.636 kb on + strand, within MPMX19_03203 at 501.636 kb on + strand, within MPMX19_03203 at 501.636 kb on + strand, within MPMX19_03203 at 501.636 kb on + strand, within MPMX19_03203 at 501.636 kb on + strand, within MPMX19_03203 at 501.637 kb on - strand, within MPMX19_03203 at 501.637 kb on - strand, within MPMX19_03203 at 501.637 kb on - strand, within MPMX19_03203 at 501.647 kb on + strand, within MPMX19_03203 at 501.648 kb on - strand, within MPMX19_03203 at 501.907 kb on + strand at 501.907 kb on + strand at 501.907 kb on + strand at 501.907 kb on + strand at 501.907 kb on + strand at 501.907 kb on + strand at 501.908 kb on - strand at 501.908 kb on - strand at 501.908 kb on - strand at 501.930 kb on - strand at 501.981 kb on + strand at 501.981 kb on + strand at 501.981 kb on + strand at 501.982 kb on - strand at 501.982 kb on - strand at 502.011 kb on + strand at 502.011 kb on + strand at 502.011 kb on + strand at 502.011 kb on + strand at 502.011 kb on + strand at 502.011 kb on + strand at 502.011 kb on + strand at 502.011 kb on + strand at 502.011 kb on + strand at 502.011 kb on + strand at 502.011 kb on + strand at 502.011 kb on + strand at 502.011 kb on + strand at 502.011 kb on + strand at 502.011 kb on + strand at 502.011 kb on + strand at 502.011 kb on + strand at 502.012 kb on - strand at 502.012 kb on - strand at 502.012 kb on - strand at 502.012 kb on - strand at 502.012 kb on - strand at 502.012 kb on - strand at 502.012 kb on - strand at 502.012 kb on - strand at 502.012 kb on - strand at 502.012 kb on - strand at 502.012 kb on - strand at 502.012 kb on - strand at 502.012 kb on - strand at 502.013 kb on + strand at 502.014 kb on - strand at 502.014 kb on - strand at 502.058 kb on + strand at 502.086 kb on + strand at 502.086 kb on + strand at 502.087 kb on - strand at 502.087 kb on - strand at 502.087 kb on - strand at 502.087 kb on - strand at 502.087 kb on - strand at 502.087 kb on - strand at 502.331 kb on + strand, within MPMX19_03204 at 502.390 kb on - strand, within MPMX19_03204 at 502.498 kb on + strand, within MPMX19_03204 at 502.498 kb on + strand, within MPMX19_03204 at 502.498 kb on + strand, within MPMX19_03204 at 502.498 kb on + strand, within MPMX19_03204 at 502.498 kb on + strand, within MPMX19_03204 at 502.498 kb on + strand, within MPMX19_03204 at 502.498 kb on + strand, within MPMX19_03204 at 502.498 kb on + strand, within MPMX19_03204 at 502.499 kb on - strand, within MPMX19_03204 at 502.499 kb on - strand, within MPMX19_03204 at 502.499 kb on - strand, within MPMX19_03204 at 502.499 kb on - strand, within MPMX19_03204 at 502.499 kb on - strand, within MPMX19_03204 at 502.499 kb on - strand, within MPMX19_03204 at 502.546 kb on + strand, within MPMX19_03204 at 502.546 kb on + strand, within MPMX19_03204 at 502.546 kb on + strand, within MPMX19_03204 at 502.547 kb on - strand, within MPMX19_03204 at 502.547 kb on - strand, within MPMX19_03204 at 502.598 kb on + strand, within MPMX19_03204 at 502.598 kb on + strand, within MPMX19_03204 at 502.598 kb on + strand, within MPMX19_03204 at 502.598 kb on + strand, within MPMX19_03204 at 502.598 kb on + strand, within MPMX19_03204 at 502.598 kb on + strand, within MPMX19_03204 at 502.599 kb on - strand, within MPMX19_03204 at 502.599 kb on - strand, within MPMX19_03204 at 502.599 kb on - strand, within MPMX19_03204 at 502.599 kb on - strand, within MPMX19_03204 at 502.600 kb on + strand, within MPMX19_03204 at 502.600 kb on + strand, within MPMX19_03204 at 502.601 kb on - strand, within MPMX19_03204 at 502.658 kb on + strand, within MPMX19_03204 at 502.658 kb on + strand, within MPMX19_03204 at 502.658 kb on + strand, within MPMX19_03204 at 502.658 kb on + strand, within MPMX19_03204 at 502.658 kb on + strand, within MPMX19_03204 at 502.658 kb on + strand, within MPMX19_03204 at 502.658 kb on + strand, within MPMX19_03204 at 502.659 kb on - strand, within MPMX19_03204 at 502.659 kb on - strand, within MPMX19_03204 at 502.659 kb on - strand, within MPMX19_03204 at 502.659 kb on - strand, within MPMX19_03204 at 502.745 kb on + strand, within MPMX19_03204 at 502.894 kb on + strand, within MPMX19_03204 at 502.940 kb on + strand, within MPMX19_03204 at 502.940 kb on + strand, within MPMX19_03204 at 502.941 kb on - strand, within MPMX19_03204 at 503.025 kb on + strand, within MPMX19_03204 at 503.025 kb on + strand, within MPMX19_03204 at 503.026 kb on - strand, within MPMX19_03204 at 503.026 kb on - strand, within MPMX19_03204 at 503.026 kb on - strand, within MPMX19_03204 at 503.026 kb on - strand, within MPMX19_03204 at 503.154 kb on - strand at 503.154 kb on - strand at 503.154 kb on - strand at 503.154 kb on - strand at 503.154 kb on - strand at 503.318 kb on + strand at 503.318 kb on + strand at 503.318 kb on + strand at 503.318 kb on + strand at 503.318 kb on + strand at 503.319 kb on - strand at 503.319 kb on - strand at 503.319 kb on - strand at 503.368 kb on - strand at 503.406 kb on + strand at 503.406 kb on + strand at 503.406 kb on + strand at 503.406 kb on + strand at 503.407 kb on - strand at 503.407 kb on - strand at 503.427 kb on + strand at 503.427 kb on + strand at 503.427 kb on + strand at 503.427 kb on + strand at 503.428 kb on - strand at 503.428 kb on - strand at 503.428 kb on - strand at 503.428 kb on - strand at 503.428 kb on - strand at 503.428 kb on - strand at 503.470 kb on + strand at 503.470 kb on + strand at 503.470 kb on + strand at 503.471 kb on - strand at 503.471 kb on - strand at 503.471 kb on - strand at 503.528 kb on + strand at 503.528 kb on + strand at 503.528 kb on + strand at 503.528 kb on + strand at 503.529 kb on - strand at 503.529 kb on - strand at 503.529 kb on - strand at 503.803 kb on + strand, within MPMX19_03205 at 504.087 kb on - strand, within MPMX19_03205
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 501,168 + MPMX19_03203 0.28 +0.4 501,169 - MPMX19_03203 0.28 -0.2 501,169 - MPMX19_03203 0.28 -0.2 501,448 + MPMX19_03203 0.55 -0.9 501,448 + MPMX19_03203 0.55 +0.3 501,448 + MPMX19_03203 0.55 +1.0 501,448 + MPMX19_03203 0.55 -2.0 501,448 + MPMX19_03203 0.55 -0.6 501,546 + MPMX19_03203 0.65 +1.0 501,548 + MPMX19_03203 0.65 +0.3 501,548 + MPMX19_03203 0.65 -0.0 501,549 - MPMX19_03203 0.65 +0.5 501,549 - MPMX19_03203 0.65 -0.2 501,570 + MPMX19_03203 0.67 +0.0 501,634 + MPMX19_03203 0.73 -0.2 501,634 + MPMX19_03203 0.73 -1.0 501,634 + MPMX19_03203 0.73 +0.0 501,634 + MPMX19_03203 0.73 +0.2 501,634 + MPMX19_03203 0.73 -1.2 501,634 + MPMX19_03203 0.73 -1.0 501,634 + MPMX19_03203 0.73 -1.0 501,634 + MPMX19_03203 0.73 -0.2 501,634 + MPMX19_03203 0.73 +0.2 501,635 - MPMX19_03203 0.73 +0.2 501,635 - MPMX19_03203 0.73 -1.1 501,635 - MPMX19_03203 0.73 -0.3 501,635 - MPMX19_03203 0.73 -0.3 501,635 - MPMX19_03203 0.73 -0.4 501,636 + MPMX19_03203 0.74 -1.1 501,636 + MPMX19_03203 0.74 -0.7 501,636 + MPMX19_03203 0.74 -0.2 501,636 + MPMX19_03203 0.74 -0.5 501,636 + MPMX19_03203 0.74 -0.3 501,637 - MPMX19_03203 0.74 -0.1 501,637 - MPMX19_03203 0.74 -1.0 501,637 - MPMX19_03203 0.74 +0.2 501,647 + MPMX19_03203 0.75 -1.0 501,648 - MPMX19_03203 0.75 -0.6 501,907 + -0.5 501,907 + -1.3 501,907 + +0.4 501,907 + +0.5 501,907 + +1.0 501,907 + -0.6 501,908 - -0.6 501,908 - +0.5 501,908 - -0.5 501,930 - -0.8 501,981 + -1.0 501,981 + -0.5 501,981 + +0.2 501,982 - +0.7 501,982 - -0.7 502,011 + -0.8 502,011 + +0.7 502,011 + -0.0 502,011 + -1.0 502,011 + -1.4 502,011 + +0.0 502,011 + -1.5 502,011 + -0.3 502,011 + -0.0 502,011 + +0.7 502,011 + -1.7 502,011 + -1.5 502,011 + -0.6 502,011 + -0.0 502,011 + -1.3 502,011 + -0.0 502,011 + +0.5 502,012 - +1.0 502,012 - +0.5 502,012 - -1.5 502,012 - +0.2 502,012 - -0.2 502,012 - -1.2 502,012 - -1.0 502,012 - -1.0 502,012 - -2.1 502,012 - -1.3 502,012 - -1.7 502,012 - -0.8 502,012 - -1.2 502,013 + -1.4 502,014 - +1.5 502,014 - -0.7 502,058 + -0.8 502,086 + -1.1 502,086 + +0.5 502,087 - -0.9 502,087 - -0.0 502,087 - -1.5 502,087 - +0.6 502,087 - +0.1 502,087 - -0.0 502,331 + MPMX19_03204 0.21 -0.3 502,390 - MPMX19_03204 0.26 -0.0 502,498 + MPMX19_03204 0.35 -0.6 502,498 + MPMX19_03204 0.35 -0.4 502,498 + MPMX19_03204 0.35 +0.1 502,498 + MPMX19_03204 0.35 +0.3 502,498 + MPMX19_03204 0.35 +0.3 502,498 + MPMX19_03204 0.35 -0.8 502,498 + MPMX19_03204 0.35 -0.5 502,498 + MPMX19_03204 0.35 -0.6 502,499 - MPMX19_03204 0.35 -2.0 502,499 - MPMX19_03204 0.35 -2.2 502,499 - MPMX19_03204 0.35 -0.7 502,499 - MPMX19_03204 0.35 +2.0 502,499 - MPMX19_03204 0.35 +0.0 502,499 - MPMX19_03204 0.35 -3.0 502,546 + MPMX19_03204 0.39 +0.3 502,546 + MPMX19_03204 0.39 -0.2 502,546 + MPMX19_03204 0.39 -0.5 502,547 - MPMX19_03204 0.39 -0.3 502,547 - MPMX19_03204 0.39 -0.4 502,598 + MPMX19_03204 0.44 +0.5 502,598 + MPMX19_03204 0.44 -0.6 502,598 + MPMX19_03204 0.44 +0.8 502,598 + MPMX19_03204 0.44 -0.0 502,598 + MPMX19_03204 0.44 -0.2 502,598 + MPMX19_03204 0.44 -0.9 502,599 - MPMX19_03204 0.44 -0.8 502,599 - MPMX19_03204 0.44 +0.3 502,599 - MPMX19_03204 0.44 -0.7 502,599 - MPMX19_03204 0.44 -0.1 502,600 + MPMX19_03204 0.44 -2.2 502,600 + MPMX19_03204 0.44 -0.5 502,601 - MPMX19_03204 0.44 -0.1 502,658 + MPMX19_03204 0.49 -0.3 502,658 + MPMX19_03204 0.49 +1.0 502,658 + MPMX19_03204 0.49 -1.0 502,658 + MPMX19_03204 0.49 -0.3 502,658 + MPMX19_03204 0.49 +0.5 502,658 + MPMX19_03204 0.49 +0.4 502,658 + MPMX19_03204 0.49 +0.1 502,659 - MPMX19_03204 0.49 -1.0 502,659 - MPMX19_03204 0.49 +0.4 502,659 - MPMX19_03204 0.49 -1.4 502,659 - MPMX19_03204 0.49 +0.1 502,745 + MPMX19_03204 0.56 -0.8 502,894 + MPMX19_03204 0.69 -0.0 502,940 + MPMX19_03204 0.73 +0.7 502,940 + MPMX19_03204 0.73 +2.4 502,941 - MPMX19_03204 0.73 +0.4 503,025 + MPMX19_03204 0.80 -2.0 503,025 + MPMX19_03204 0.80 +0.2 503,026 - MPMX19_03204 0.80 -0.7 503,026 - MPMX19_03204 0.80 -0.2 503,026 - MPMX19_03204 0.80 -0.6 503,026 - MPMX19_03204 0.80 -0.7 503,154 - +0.6 503,154 - -0.3 503,154 - -1.2 503,154 - +0.8 503,154 - +0.5 503,318 + +0.3 503,318 + +0.3 503,318 + -0.1 503,318 + -1.0 503,318 + -0.6 503,319 - -1.3 503,319 - -1.2 503,319 - +0.1 503,368 - +0.1 503,406 + +0.5 503,406 + -0.8 503,406 + -0.5 503,406 + -1.5 503,407 - +1.3 503,407 - -0.7 503,427 + +1.4 503,427 + -1.4 503,427 + -0.8 503,427 + +0.9 503,428 - +0.5 503,428 - -0.5 503,428 - -1.5 503,428 - +0.2 503,428 - -0.4 503,428 - -1.1 503,470 + -1.2 503,470 + -0.5 503,470 + +0.5 503,471 - +1.1 503,471 - -0.1 503,471 - -0.5 503,528 + +1.0 503,528 + -0.1 503,528 + +0.6 503,528 + +0.3 503,529 - -0.5 503,529 - +0.3 503,529 - +0.0 503,803 + MPMX19_03205 0.29 -0.1 504,087 - MPMX19_03205 0.56 +0.3
Or see this region's nucleotide sequence