Strain Fitness in Escherichia coli ECRC100 around OKFHMN_13215

Experiment: Bas69

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas69
2,532,237	-				+1.3
2,532,272	-				-0.5
2,532,307	-	manX	OKFHMN_13205	0.17	+0.1
2,532,386	-	manX	OKFHMN_13205	0.37	-0.0
2,532,652	+				+1.7
2,532,733	+	agaB	OKFHMN_13210	0.18	-0.3
2,532,736	+	agaB	OKFHMN_13210	0.19	-1.7
2,532,781	-	agaB	OKFHMN_13210	0.28	+0.7
2,532,781	-	agaB	OKFHMN_13210	0.28	-0.3
2,533,158	+				+1.2
2,533,159	-				-0.9
2,533,159	-				+0.2
2,533,439	+	manY	OKFHMN_13215	0.29	-0.0
2,533,710	+	manY	OKFHMN_13215	0.63	-0.2
2,533,796	+	manY	OKFHMN_13215	0.74	-1.2
2,533,797	-	manY	OKFHMN_13215	0.74	-0.3
2,533,797	-	manY	OKFHMN_13215	0.74	+0.1
2,533,797	-	manY	OKFHMN_13215	0.74	-1.0
2,533,800	+	manY	OKFHMN_13215	0.75	+0.1
2,533,800	+	manY	OKFHMN_13215	0.75	-0.3
2,533,801	-	manY	OKFHMN_13215	0.75	+1.2
2,533,801	-	manY	OKFHMN_13215	0.75	+0.4
2,533,916	-	manY	OKFHMN_13215	0.89	-0.5
2,533,925	+				+2.4
2,534,098	+	sorM	OKFHMN_13220	0.10	-1.5
2,534,099	-	sorM	OKFHMN_13220	0.11	-1.0
2,534,120	+	sorM	OKFHMN_13220	0.13	-0.3
2,534,158	-	sorM	OKFHMN_13220	0.18	+0.8
2,534,220	+	sorM	OKFHMN_13220	0.25	+0.4
2,534,221	-	sorM	OKFHMN_13220	0.25	-0.5
2,534,221	-	sorM	OKFHMN_13220	0.25	-1.0
2,534,444	-	sorM	OKFHMN_13220	0.52	+0.7
2,534,444	-	sorM	OKFHMN_13220	0.52	-0.7
2,534,477	+	sorM	OKFHMN_13220	0.56	-0.3
2,534,477	+	sorM	OKFHMN_13220	0.56	-0.8
2,534,622	+	sorM	OKFHMN_13220	0.74	+0.8
2,534,622	+	sorM	OKFHMN_13220	0.74	-0.3
2,534,622	+	sorM	OKFHMN_13220	0.74	+1.1
2,534,773	-				-0.8
2,534,799	+				-1.1
2,534,888	-				-0.0
2,534,913	-				-0.1