Strain Fitness in Escherichia coli ECRC100 around OKFHMN_12060

Experiment: Bas69

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas69
2,312,036	+				-0.4
2,312,036	+				+2.0
2,312,040	-				+1.3
2,312,068	-				+2.4
2,312,110	+				-1.4
2,312,110	+				-0.3
2,312,111	-				+0.4
2,312,184	+	qorB	OKFHMN_12055	0.18	-0.3
2,312,282	+	qorB	OKFHMN_12055	0.30	+0.0
2,312,288	+	qorB	OKFHMN_12055	0.30	-0.1
2,312,288	+	qorB	OKFHMN_12055	0.30	+0.1
2,312,289	-	qorB	OKFHMN_12055	0.30	+0.9
2,312,289	-	qorB	OKFHMN_12055	0.30	-1.5
2,312,292	-	qorB	OKFHMN_12055	0.31	-1.6
2,312,328	+	qorB	OKFHMN_12055	0.35	-0.1
2,312,329	-	qorB	OKFHMN_12055	0.35	-1.4
2,312,329	-	qorB	OKFHMN_12055	0.35	-0.5
2,312,330	+	qorB	OKFHMN_12055	0.35	+0.5
2,312,330	+	qorB	OKFHMN_12055	0.35	+2.0
2,312,421	+	qorB	OKFHMN_12055	0.46	-0.2
2,312,678	+	qorB	OKFHMN_12055	0.75	-0.6
2,312,682	+	qorB	OKFHMN_12055	0.76	-0.8
2,312,753	+	qorB	OKFHMN_12055	0.84	+0.5
2,312,816	+				-1.1
2,312,817	-				-0.1
2,312,860	+				-1.8
2,312,886	+				+0.4
2,312,924	+				-1.1
2,313,014	+				+1.0
2,313,015	-				-0.8
2,313,015	-				+0.5
2,313,024	+				-0.4
2,313,107	+	ytfF	OKFHMN_12060	0.11	+0.4
2,313,208	+	ytfF	OKFHMN_12060	0.22	+0.2
2,313,208	+	ytfF	OKFHMN_12060	0.22	+1.3
2,313,209	-	ytfF	OKFHMN_12060	0.22	-0.2
2,313,228	-	ytfF	OKFHMN_12060	0.24	-0.0
2,313,230	+	ytfF	OKFHMN_12060	0.24	+0.4
2,313,259	+	ytfF	OKFHMN_12060	0.27	-0.6
2,313,333	-	ytfF	OKFHMN_12060	0.35	-0.8
2,313,388	+	ytfF	OKFHMN_12060	0.41	-0.8
2,313,388	+	ytfF	OKFHMN_12060	0.41	+0.1
2,313,415	+	ytfF	OKFHMN_12060	0.43	-0.1
2,313,463	+	ytfF	OKFHMN_12060	0.48	-0.2
2,313,463	+	ytfF	OKFHMN_12060	0.48	+0.1
2,313,463	+	ytfF	OKFHMN_12060	0.48	-0.5
2,313,464	-	ytfF	OKFHMN_12060	0.48	+1.1
2,313,464	-	ytfF	OKFHMN_12060	0.48	-0.5
2,313,487	-	ytfF	OKFHMN_12060	0.51	-0.2
2,313,611	-	ytfF	OKFHMN_12060	0.64	+0.1
2,313,983	-				-0.1
2,313,993	+				+0.3
2,313,998	-				-0.0
2,314,047	+				-0.0
2,314,062	-				-0.6
2,314,062	-				+0.2
2,314,068	+				+1.4
2,314,069	-				-0.2
2,314,075	+				-0.2
2,314,141	+	ytfE	OKFHMN_12065	0.11	-0.3
2,314,141	+	ytfE	OKFHMN_12065	0.11	+0.2
2,314,142	-	ytfE	OKFHMN_12065	0.11	-0.7
2,314,142	-	ytfE	OKFHMN_12065	0.11	-0.1
2,314,142	-	ytfE	OKFHMN_12065	0.11	+0.3
2,314,153	+	ytfE	OKFHMN_12065	0.13	-0.2
2,314,197	+	ytfE	OKFHMN_12065	0.19	-0.6
2,314,197	+	ytfE	OKFHMN_12065	0.19	+0.1
2,314,302	+	ytfE	OKFHMN_12065	0.35	-0.7
2,314,420	+	ytfE	OKFHMN_12065	0.53	-0.9
2,314,420	+	ytfE	OKFHMN_12065	0.53	-0.0
2,314,639	+	ytfE	OKFHMN_12065	0.86	-0.2
2,314,639	+	ytfE	OKFHMN_12065	0.86	-0.3
2,314,640	-	ytfE	OKFHMN_12065	0.86	-0.2
2,314,641	+	ytfE	OKFHMN_12065	0.86	-0.4
2,314,700	+				-0.6
2,314,700	+				-0.5
2,314,701	-				-0.4
2,314,734	+				+2.0
2,314,768	+				-1.0
2,314,768	+				+0.5
2,314,768	+				-0.2
2,314,806	-				+1.0
2,314,922	+	cycA	OKFHMN_12070	0.10	+1.9
2,314,923	-	cycA	OKFHMN_12070	0.10	-0.2
2,314,927	-	cycA	OKFHMN_12070	0.11	-0.4
2,314,927	-	cycA	OKFHMN_12070	0.11	+0.3
2,314,960	+	cycA	OKFHMN_12070	0.13	+0.3