Strain Fitness in Escherichia coli ECRC100 around OKFHMN_01045

Experiment: Bas69

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntdgcZ and mgtS are separated by 218 nucleotidesmgtS and ftrA are separated by 107 nucleotides OKFHMN_01035: dgcZ - diguanylate cyclase DgcZ, at 98,862 to 99,752 dgcZ OKFHMN_01045: mgtS - protein MgtS, at 99,971 to 100,066 mgtS OKFHMN_01050: ftrA - transcriptional regulator FtrA, at 100,174 to 101,145 ftrA Position (kb) 99 100 101Strain fitness (log2 ratio) -1 0 1 2at 100.058 kb on - strandat 100.068 kb on - strandat 100.220 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas69
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100,058 - +2.3
100,068 - +0.3
100,220 - +0.8

Or see this region's nucleotide sequence