Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt rhaT and OKGIIK_16855 are separated by 60 nucleotides OKGIIK_16855 and OKGIIK_16860 are separated by 217 nucleotides OKGIIK_16860 and groL are separated by 110 nucleotides
OKGIIK_16850: rhaT - EamA family transporter, at 3,695,308 to 3,696,204
rhaT
OKGIIK_16855: OKGIIK_16855 - Cation tolerance protein, at 3,696,265 to 3,696,618
_16855
OKGIIK_16860: OKGIIK_16860 - Co-chaperonin GroES, at 3,696,836 to 3,697,129
_16860
OKGIIK_16865: groL - chaperonin GroEL, at 3,697,240 to 3,698,889
groL
Position (kb)
3696
3697
3698 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3696.314 kb on + strand, within OKGIIK_16855 at 3696.314 kb on + strand, within OKGIIK_16855 at 3696.315 kb on - strand, within OKGIIK_16855 at 3696.315 kb on - strand, within OKGIIK_16855 at 3696.366 kb on - strand, within OKGIIK_16855 at 3696.366 kb on - strand, within OKGIIK_16855 at 3696.366 kb on - strand, within OKGIIK_16855 at 3696.366 kb on - strand, within OKGIIK_16855 at 3696.473 kb on + strand, within OKGIIK_16855 at 3696.474 kb on - strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.629 kb on + strand at 3696.629 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.740 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 3,696,314 + OKGIIK_16855 0.14 -1.2 3,696,314 + OKGIIK_16855 0.14 +0.0 3,696,315 - OKGIIK_16855 0.14 -0.5 3,696,315 - OKGIIK_16855 0.14 -0.7 3,696,366 - OKGIIK_16855 0.29 -0.7 3,696,366 - OKGIIK_16855 0.29 -1.2 3,696,366 - OKGIIK_16855 0.29 -0.2 3,696,366 - OKGIIK_16855 0.29 -0.4 3,696,473 + OKGIIK_16855 0.59 -1.6 3,696,474 - OKGIIK_16855 0.59 -1.5 3,696,578 + OKGIIK_16855 0.88 +0.6 3,696,578 + OKGIIK_16855 0.88 +0.0 3,696,578 + OKGIIK_16855 0.88 +1.9 3,696,578 + OKGIIK_16855 0.88 +1.2 3,696,578 + OKGIIK_16855 0.88 -0.3 3,696,578 + OKGIIK_16855 0.88 +0.6 3,696,578 + OKGIIK_16855 0.88 -0.1 3,696,579 - OKGIIK_16855 0.89 -0.9 3,696,579 - OKGIIK_16855 0.89 -0.6 3,696,579 - OKGIIK_16855 0.89 +0.1 3,696,579 - OKGIIK_16855 0.89 -0.3 3,696,579 - OKGIIK_16855 0.89 -1.2 3,696,579 - OKGIIK_16855 0.89 +0.4 3,696,579 - OKGIIK_16855 0.89 -0.9 3,696,629 + +0.9 3,696,629 + +0.8 3,696,689 + -0.8 3,696,689 + -0.7 3,696,689 + -0.1 3,696,689 + -0.4 3,696,689 + -0.2 3,696,689 + +0.4 3,696,689 + -1.0 3,696,689 + +0.9 3,696,689 + -1.2 3,696,689 + +1.1 3,696,689 + +1.2 3,696,689 + -0.4 3,696,689 + -2.2 3,696,689 + +1.9 3,696,690 - -2.9 3,696,690 - -0.7 3,696,690 - -0.2 3,696,690 - -0.1 3,696,690 - +2.5 3,696,690 - +0.0 3,696,690 - -0.2 3,696,690 - +0.7 3,696,690 - +0.4 3,696,690 - +0.1 3,696,690 - -0.8 3,696,690 - -0.6 3,696,690 - -0.8 3,696,690 - -1.9 3,696,740 + +0.9
Or see this region's nucleotide sequence