Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_16735

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntsrkA and OKGIIK_16735 are separated by 111 nucleotidesOKGIIK_16735 and OKGIIK_16740 are separated by 54 nucleotides OKGIIK_16730: srkA - serine/threonine protein kinase, at 3,670,785 to 3,671,732 srkA OKGIIK_16735: OKGIIK_16735 - esterase, at 3,671,844 to 3,672,284 _16735 OKGIIK_16740: OKGIIK_16740 - NAD(P)H-flavin reductase, at 3,672,339 to 3,673,400 _16740 Position (kb) 3671 3672 3673Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3670.912 kb on + strand, within srkAat 3670.912 kb on + strand, within srkAat 3670.912 kb on + strand, within srkAat 3670.912 kb on + strand, within srkAat 3670.912 kb on + strand, within srkAat 3671.215 kb on + strand, within srkAat 3671.215 kb on + strand, within srkAat 3671.216 kb on - strand, within srkAat 3671.216 kb on - strand, within srkAat 3671.216 kb on - strand, within srkAat 3671.216 kb on - strand, within srkAat 3671.429 kb on - strand, within srkAat 3671.566 kb on + strand, within srkAat 3671.566 kb on + strand, within srkAat 3671.566 kb on + strand, within srkAat 3671.567 kb on - strand, within srkAat 3671.626 kb on + strand, within srkAat 3671.626 kb on + strand, within srkAat 3671.626 kb on + strand, within srkAat 3671.626 kb on + strand, within srkAat 3671.626 kb on + strand, within srkAat 3671.627 kb on - strand, within srkAat 3671.627 kb on - strand, within srkAat 3671.627 kb on - strand, within srkAat 3671.627 kb on - strand, within srkAat 3671.713 kb on + strandat 3671.714 kb on - strandat 3671.714 kb on - strandat 3671.714 kb on - strandat 3671.714 kb on - strandat 3671.737 kb on + strandat 3671.737 kb on + strandat 3671.738 kb on - strandat 3671.738 kb on - strandat 3671.850 kb on + strandat 3671.850 kb on + strandat 3671.850 kb on + strandat 3671.850 kb on + strandat 3671.850 kb on + strandat 3671.850 kb on + strandat 3671.850 kb on + strandat 3671.850 kb on + strandat 3671.850 kb on + strandat 3671.851 kb on - strandat 3671.851 kb on - strandat 3671.851 kb on - strandat 3672.026 kb on + strand, within OKGIIK_16735at 3672.026 kb on + strand, within OKGIIK_16735at 3672.027 kb on - strand, within OKGIIK_16735at 3672.028 kb on + strand, within OKGIIK_16735at 3672.133 kb on + strand, within OKGIIK_16735at 3672.353 kb on + strandat 3672.353 kb on + strandat 3672.447 kb on + strand, within OKGIIK_16740at 3672.447 kb on + strand, within OKGIIK_16740at 3672.447 kb on + strand, within OKGIIK_16740at 3672.447 kb on + strand, within OKGIIK_16740at 3672.448 kb on - strand, within OKGIIK_16740at 3672.756 kb on + strand, within OKGIIK_16740at 3672.756 kb on + strand, within OKGIIK_16740at 3672.756 kb on + strand, within OKGIIK_16740at 3672.756 kb on + strand, within OKGIIK_16740at 3672.756 kb on + strand, within OKGIIK_16740at 3672.756 kb on + strand, within OKGIIK_16740at 3672.756 kb on + strand, within OKGIIK_16740at 3672.757 kb on - strand, within OKGIIK_16740at 3672.757 kb on - strand, within OKGIIK_16740at 3672.757 kb on - strand, within OKGIIK_16740at 3672.757 kb on - strand, within OKGIIK_16740at 3672.757 kb on - strand, within OKGIIK_16740at 3672.757 kb on - strand, within OKGIIK_16740at 3672.757 kb on - strand, within OKGIIK_16740at 3672.757 kb on - strand, within OKGIIK_16740at 3672.757 kb on - strand, within OKGIIK_16740at 3673.059 kb on + strand, within OKGIIK_16740at 3673.059 kb on + strand, within OKGIIK_16740at 3673.059 kb on + strand, within OKGIIK_16740at 3673.059 kb on + strand, within OKGIIK_16740at 3673.059 kb on + strand, within OKGIIK_16740at 3673.059 kb on + strand, within OKGIIK_16740at 3673.060 kb on - strand, within OKGIIK_16740at 3673.060 kb on - strand, within OKGIIK_16740at 3673.060 kb on - strand, within OKGIIK_16740at 3673.060 kb on - strand, within OKGIIK_16740at 3673.060 kb on - strand, within OKGIIK_16740at 3673.060 kb on - strand, within OKGIIK_16740at 3673.089 kb on + strand, within OKGIIK_16740at 3673.089 kb on + strand, within OKGIIK_16740at 3673.089 kb on + strand, within OKGIIK_16740at 3673.089 kb on + strand, within OKGIIK_16740at 3673.089 kb on + strand, within OKGIIK_16740at 3673.090 kb on - strand, within OKGIIK_16740at 3673.090 kb on - strand, within OKGIIK_16740at 3673.090 kb on - strand, within OKGIIK_16740at 3673.090 kb on - strand, within OKGIIK_16740at 3673.090 kb on - strand, within OKGIIK_16740at 3673.090 kb on - strand, within OKGIIK_16740at 3673.090 kb on - strand, within OKGIIK_16740at 3673.090 kb on - strand, within OKGIIK_16740at 3673.110 kb on + strand, within OKGIIK_16740at 3673.110 kb on + strand, within OKGIIK_16740at 3673.110 kb on + strand, within OKGIIK_16740at 3673.110 kb on + strand, within OKGIIK_16740at 3673.111 kb on - strand, within OKGIIK_16740at 3673.111 kb on - strand, within OKGIIK_16740at 3673.111 kb on - strand, within OKGIIK_16740at 3673.111 kb on - strand, within OKGIIK_16740at 3673.111 kb on - strand, within OKGIIK_16740at 3673.111 kb on - strand, within OKGIIK_16740at 3673.135 kb on + strand, within OKGIIK_16740at 3673.135 kb on + strand, within OKGIIK_16740at 3673.135 kb on + strand, within OKGIIK_16740at 3673.135 kb on + strand, within OKGIIK_16740at 3673.135 kb on + strand, within OKGIIK_16740at 3673.135 kb on + strand, within OKGIIK_16740at 3673.135 kb on + strand, within OKGIIK_16740at 3673.136 kb on - strand, within OKGIIK_16740at 3673.136 kb on - strand, within OKGIIK_16740at 3673.136 kb on - strand, within OKGIIK_16740at 3673.136 kb on - strand, within OKGIIK_16740at 3673.136 kb on - strand, within OKGIIK_16740at 3673.136 kb on - strand, within OKGIIK_16740at 3673.136 kb on - strand, within OKGIIK_16740at 3673.136 kb on - strand, within OKGIIK_16740at 3673.184 kb on + strand, within OKGIIK_16740at 3673.184 kb on + strand, within OKGIIK_16740at 3673.184 kb on + strand, within OKGIIK_16740at 3673.184 kb on + strand, within OKGIIK_16740at 3673.185 kb on - strand, within OKGIIK_16740at 3673.185 kb on - strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.245 kb on + strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740at 3673.246 kb on - strand, within OKGIIK_16740

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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3,670,912 + srkA OKGIIK_16730 0.13 -1.4
3,670,912 + srkA OKGIIK_16730 0.13 -1.4
3,670,912 + srkA OKGIIK_16730 0.13 -1.6
3,670,912 + srkA OKGIIK_16730 0.13 -0.7
3,670,912 + srkA OKGIIK_16730 0.13 +0.6
3,671,215 + srkA OKGIIK_16730 0.45 -0.3
3,671,215 + srkA OKGIIK_16730 0.45 -0.5
3,671,216 - srkA OKGIIK_16730 0.45 -0.3
3,671,216 - srkA OKGIIK_16730 0.45 -0.7
3,671,216 - srkA OKGIIK_16730 0.45 -0.3
3,671,216 - srkA OKGIIK_16730 0.45 -0.2
3,671,429 - srkA OKGIIK_16730 0.68 -0.2
3,671,566 + srkA OKGIIK_16730 0.82 +0.3
3,671,566 + srkA OKGIIK_16730 0.82 +0.3
3,671,566 + srkA OKGIIK_16730 0.82 -1.2
3,671,567 - srkA OKGIIK_16730 0.82 +0.7
3,671,626 + srkA OKGIIK_16730 0.89 +2.1
3,671,626 + srkA OKGIIK_16730 0.89 +0.3
3,671,626 + srkA OKGIIK_16730 0.89 -0.4
3,671,626 + srkA OKGIIK_16730 0.89 +0.3
3,671,626 + srkA OKGIIK_16730 0.89 +0.5
3,671,627 - srkA OKGIIK_16730 0.89 -0.4
3,671,627 - srkA OKGIIK_16730 0.89 -0.2
3,671,627 - srkA OKGIIK_16730 0.89 -0.1
3,671,627 - srkA OKGIIK_16730 0.89 +1.9
3,671,713 + -0.1
3,671,714 - +0.2
3,671,714 - -0.2
3,671,714 - -0.7
3,671,714 - -0.2
3,671,737 + +1.9
3,671,737 + -0.1
3,671,738 - -0.7
3,671,738 - -0.4
3,671,850 + -0.9
3,671,850 + -0.7
3,671,850 + -1.0
3,671,850 + -2.6
3,671,850 + -0.1
3,671,850 + +1.2
3,671,850 + -1.0
3,671,850 + -0.7
3,671,850 + +0.6
3,671,851 - +0.4
3,671,851 - -1.0
3,671,851 - +1.3
3,672,026 + OKGIIK_16735 0.41 -0.4
3,672,026 + OKGIIK_16735 0.41 -1.6
3,672,027 - OKGIIK_16735 0.41 -1.0
3,672,028 + OKGIIK_16735 0.42 -0.4
3,672,133 + OKGIIK_16735 0.66 -0.9
3,672,353 + +0.0
3,672,353 + +0.6
3,672,447 + OKGIIK_16740 0.10 -1.4
3,672,447 + OKGIIK_16740 0.10 +1.3
3,672,447 + OKGIIK_16740 0.10 +1.2
3,672,447 + OKGIIK_16740 0.10 +1.6
3,672,448 - OKGIIK_16740 0.10 -1.0
3,672,756 + OKGIIK_16740 0.39 -0.3
3,672,756 + OKGIIK_16740 0.39 +0.3
3,672,756 + OKGIIK_16740 0.39 -0.4
3,672,756 + OKGIIK_16740 0.39 -2.1
3,672,756 + OKGIIK_16740 0.39 +1.5
3,672,756 + OKGIIK_16740 0.39 +0.8
3,672,756 + OKGIIK_16740 0.39 +0.2
3,672,757 - OKGIIK_16740 0.39 -0.3
3,672,757 - OKGIIK_16740 0.39 +0.9
3,672,757 - OKGIIK_16740 0.39 +0.9
3,672,757 - OKGIIK_16740 0.39 -1.7
3,672,757 - OKGIIK_16740 0.39 +1.1
3,672,757 - OKGIIK_16740 0.39 +0.5
3,672,757 - OKGIIK_16740 0.39 -0.4
3,672,757 - OKGIIK_16740 0.39 -1.2
3,672,757 - OKGIIK_16740 0.39 -0.9
3,673,059 + OKGIIK_16740 0.68 -1.8
3,673,059 + OKGIIK_16740 0.68 -1.2
3,673,059 + OKGIIK_16740 0.68 +0.0
3,673,059 + OKGIIK_16740 0.68 +0.4
3,673,059 + OKGIIK_16740 0.68 +0.4
3,673,059 + OKGIIK_16740 0.68 -0.7
3,673,060 - OKGIIK_16740 0.68 +1.3
3,673,060 - OKGIIK_16740 0.68 -0.7
3,673,060 - OKGIIK_16740 0.68 +1.4
3,673,060 - OKGIIK_16740 0.68 +0.4
3,673,060 - OKGIIK_16740 0.68 -2.2
3,673,060 - OKGIIK_16740 0.68 -2.2
3,673,089 + OKGIIK_16740 0.71 -0.8
3,673,089 + OKGIIK_16740 0.71 +0.6
3,673,089 + OKGIIK_16740 0.71 -0.4
3,673,089 + OKGIIK_16740 0.71 -0.4
3,673,089 + OKGIIK_16740 0.71 +0.7
3,673,090 - OKGIIK_16740 0.71 -0.7
3,673,090 - OKGIIK_16740 0.71 +1.4
3,673,090 - OKGIIK_16740 0.71 +0.1
3,673,090 - OKGIIK_16740 0.71 -0.8
3,673,090 - OKGIIK_16740 0.71 -1.6
3,673,090 - OKGIIK_16740 0.71 -1.2
3,673,090 - OKGIIK_16740 0.71 -0.4
3,673,090 - OKGIIK_16740 0.71 -0.4
3,673,110 + OKGIIK_16740 0.73 +0.5
3,673,110 + OKGIIK_16740 0.73 +1.5
3,673,110 + OKGIIK_16740 0.73 -1.2
3,673,110 + OKGIIK_16740 0.73 -0.7
3,673,111 - OKGIIK_16740 0.73 +0.5
3,673,111 - OKGIIK_16740 0.73 -1.2
3,673,111 - OKGIIK_16740 0.73 -1.2
3,673,111 - OKGIIK_16740 0.73 +0.2
3,673,111 - OKGIIK_16740 0.73 +0.3
3,673,111 - OKGIIK_16740 0.73 -2.0
3,673,135 + OKGIIK_16740 0.75 -0.7
3,673,135 + OKGIIK_16740 0.75 +1.9
3,673,135 + OKGIIK_16740 0.75 -1.0
3,673,135 + OKGIIK_16740 0.75 +0.6
3,673,135 + OKGIIK_16740 0.75 +3.2
3,673,135 + OKGIIK_16740 0.75 -1.0
3,673,135 + OKGIIK_16740 0.75 +1.9
3,673,136 - OKGIIK_16740 0.75 -0.9
3,673,136 - OKGIIK_16740 0.75 +0.8
3,673,136 - OKGIIK_16740 0.75 +0.9
3,673,136 - OKGIIK_16740 0.75 -0.0
3,673,136 - OKGIIK_16740 0.75 -1.2
3,673,136 - OKGIIK_16740 0.75 -0.9
3,673,136 - OKGIIK_16740 0.75 -0.1
3,673,136 - OKGIIK_16740 0.75 +1.9
3,673,184 + OKGIIK_16740 0.80 -0.2
3,673,184 + OKGIIK_16740 0.80 +0.8
3,673,184 + OKGIIK_16740 0.80 +0.0
3,673,184 + OKGIIK_16740 0.80 -0.6
3,673,185 - OKGIIK_16740 0.80 -0.2
3,673,185 - OKGIIK_16740 0.80 -1.6
3,673,245 + OKGIIK_16740 0.85 +0.6
3,673,245 + OKGIIK_16740 0.85 -1.6
3,673,245 + OKGIIK_16740 0.85 +0.8
3,673,245 + OKGIIK_16740 0.85 -0.1
3,673,245 + OKGIIK_16740 0.85 -0.6
3,673,245 + OKGIIK_16740 0.85 +0.5
3,673,245 + OKGIIK_16740 0.85 -0.4
3,673,245 + OKGIIK_16740 0.85 -1.0
3,673,245 + OKGIIK_16740 0.85 -1.9
3,673,245 + OKGIIK_16740 0.85 -1.1
3,673,245 + OKGIIK_16740 0.85 -0.5
3,673,245 + OKGIIK_16740 0.85 +1.3
3,673,245 + OKGIIK_16740 0.85 -1.0
3,673,245 + OKGIIK_16740 0.85 +0.9
3,673,245 + OKGIIK_16740 0.85 -1.7
3,673,245 + OKGIIK_16740 0.85 +0.6
3,673,245 + OKGIIK_16740 0.85 +0.0
3,673,245 + OKGIIK_16740 0.85 -0.1
3,673,245 + OKGIIK_16740 0.85 -1.4
3,673,245 + OKGIIK_16740 0.85 -0.7
3,673,245 + OKGIIK_16740 0.85 -1.2
3,673,245 + OKGIIK_16740 0.85 -0.4
3,673,245 + OKGIIK_16740 0.85 -0.4
3,673,245 + OKGIIK_16740 0.85 -2.3
3,673,245 + OKGIIK_16740 0.85 +1.9
3,673,245 + OKGIIK_16740 0.85 -0.4
3,673,245 + OKGIIK_16740 0.85 +0.6
3,673,245 + OKGIIK_16740 0.85 -0.2
3,673,245 + OKGIIK_16740 0.85 -1.0
3,673,245 + OKGIIK_16740 0.85 -1.4
3,673,245 + OKGIIK_16740 0.85 -1.2
3,673,245 + OKGIIK_16740 0.85 -1.4
3,673,245 + OKGIIK_16740 0.85 -1.5
3,673,245 + OKGIIK_16740 0.85 -2.6
3,673,245 + OKGIIK_16740 0.85 -0.0
3,673,245 + OKGIIK_16740 0.85 -1.1
3,673,245 + OKGIIK_16740 0.85 -0.6
3,673,245 + OKGIIK_16740 0.85 -0.4
3,673,245 + OKGIIK_16740 0.85 +1.3
3,673,245 + OKGIIK_16740 0.85 -1.2
3,673,245 + OKGIIK_16740 0.85 +0.2
3,673,246 - OKGIIK_16740 0.85 -2.0
3,673,246 - OKGIIK_16740 0.85 +0.1
3,673,246 - OKGIIK_16740 0.85 +1.5
3,673,246 - OKGIIK_16740 0.85 +0.4
3,673,246 - OKGIIK_16740 0.85 -1.7
3,673,246 - OKGIIK_16740 0.85 +0.7
3,673,246 - OKGIIK_16740 0.85 -0.3
3,673,246 - OKGIIK_16740 0.85 +2.2
3,673,246 - OKGIIK_16740 0.85 +0.8
3,673,246 - OKGIIK_16740 0.85 -1.2
3,673,246 - OKGIIK_16740 0.85 -0.6
3,673,246 - OKGIIK_16740 0.85 -0.7
3,673,246 - OKGIIK_16740 0.85 +2.6
3,673,246 - OKGIIK_16740 0.85 -1.3
3,673,246 - OKGIIK_16740 0.85 -0.4
3,673,246 - OKGIIK_16740 0.85 -0.2
3,673,246 - OKGIIK_16740 0.85 +0.2
3,673,246 - OKGIIK_16740 0.85 +1.6
3,673,246 - OKGIIK_16740 0.85 -0.4
3,673,246 - OKGIIK_16740 0.85 +0.2
3,673,246 - OKGIIK_16740 0.85 -1.3
3,673,246 - OKGIIK_16740 0.85 -1.4
3,673,246 - OKGIIK_16740 0.85 -1.4
3,673,246 - OKGIIK_16740 0.85 -1.6
3,673,246 - OKGIIK_16740 0.85 +0.2
3,673,246 - OKGIIK_16740 0.85 -0.1
3,673,246 - OKGIIK_16740 0.85 -0.8
3,673,246 - OKGIIK_16740 0.85 -1.6
3,673,246 - OKGIIK_16740 0.85 -0.6
3,673,246 - OKGIIK_16740 0.85 -0.7
3,673,246 - OKGIIK_16740 0.85 +2.4
3,673,246 - OKGIIK_16740 0.85 -0.4
3,673,246 - OKGIIK_16740 0.85 -1.4
3,673,246 - OKGIIK_16740 0.85 -1.6
3,673,246 - OKGIIK_16740 0.85 +0.8

Or see this region's nucleotide sequence