Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt speA and OKGIIK_15630 are separated by 125 nucleotides OKGIIK_15630 and OKGIIK_15635 overlap by 1 nucleotides
OKGIIK_15625: speA - biosynthetic arginine decarboxylase, at 3,411,817 to 3,413,706
speA
OKGIIK_15630: OKGIIK_15630 - 3-hydroxybutyrate dehydrogenase, at 3,413,832 to 3,414,632
_15630
OKGIIK_15635: OKGIIK_15635 - PNPLA domain-containing protein, at 3,414,632 to 3,415,816
_15635
Position (kb)
3413
3414
3415 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3413.766 kb on + strand at 3413.766 kb on + strand at 3413.766 kb on + strand at 3413.767 kb on - strand at 3413.767 kb on - strand at 3413.767 kb on - strand at 3413.767 kb on - strand at 3413.907 kb on + strand at 3413.907 kb on + strand at 3413.907 kb on + strand at 3413.907 kb on + strand at 3413.907 kb on + strand at 3413.908 kb on - strand at 3413.908 kb on - strand at 3413.908 kb on - strand at 3413.908 kb on - strand at 3414.219 kb on + strand, within OKGIIK_15630 at 3414.219 kb on + strand, within OKGIIK_15630 at 3414.219 kb on + strand, within OKGIIK_15630 at 3414.219 kb on + strand, within OKGIIK_15630 at 3414.219 kb on + strand, within OKGIIK_15630 at 3414.219 kb on + strand, within OKGIIK_15630 at 3414.219 kb on + strand, within OKGIIK_15630 at 3414.219 kb on + strand, within OKGIIK_15630 at 3414.219 kb on + strand, within OKGIIK_15630 at 3414.219 kb on + strand, within OKGIIK_15630 at 3414.220 kb on - strand, within OKGIIK_15630 at 3414.220 kb on - strand, within OKGIIK_15630 at 3414.220 kb on - strand, within OKGIIK_15630 at 3414.220 kb on - strand, within OKGIIK_15630 at 3414.220 kb on - strand, within OKGIIK_15630 at 3414.220 kb on - strand, within OKGIIK_15630 at 3414.220 kb on - strand, within OKGIIK_15630 at 3414.264 kb on + strand, within OKGIIK_15630 at 3414.264 kb on + strand, within OKGIIK_15630 at 3414.264 kb on + strand, within OKGIIK_15630 at 3414.264 kb on + strand, within OKGIIK_15630 at 3414.264 kb on + strand, within OKGIIK_15630 at 3414.264 kb on + strand, within OKGIIK_15630 at 3414.264 kb on + strand, within OKGIIK_15630 at 3414.264 kb on + strand, within OKGIIK_15630 at 3414.264 kb on + strand, within OKGIIK_15630 at 3414.264 kb on + strand, within OKGIIK_15630 at 3414.265 kb on - strand, within OKGIIK_15630 at 3414.265 kb on - strand, within OKGIIK_15630 at 3414.265 kb on - strand, within OKGIIK_15630 at 3414.265 kb on - strand, within OKGIIK_15630 at 3414.265 kb on - strand, within OKGIIK_15630 at 3414.265 kb on - strand, within OKGIIK_15630 at 3414.265 kb on - strand, within OKGIIK_15630 at 3414.265 kb on - strand, within OKGIIK_15630 at 3414.265 kb on - strand, within OKGIIK_15630 at 3414.313 kb on - strand, within OKGIIK_15630 at 3414.313 kb on - strand, within OKGIIK_15630 at 3414.558 kb on + strand at 3414.558 kb on + strand at 3414.558 kb on + strand at 3414.558 kb on + strand at 3414.558 kb on + strand at 3414.559 kb on - strand at 3414.559 kb on - strand at 3414.630 kb on + strand at 3414.631 kb on - strand at 3414.631 kb on - strand at 3414.631 kb on - strand at 3414.631 kb on - strand at 3414.631 kb on - strand at 3414.692 kb on - strand at 3414.692 kb on - strand at 3414.736 kb on - strand at 3415.082 kb on + strand, within OKGIIK_15635 at 3415.082 kb on + strand, within OKGIIK_15635 at 3415.082 kb on + strand, within OKGIIK_15635 at 3415.082 kb on + strand, within OKGIIK_15635 at 3415.082 kb on + strand, within OKGIIK_15635 at 3415.083 kb on - strand, within OKGIIK_15635 at 3415.083 kb on - strand, within OKGIIK_15635 at 3415.083 kb on - strand, within OKGIIK_15635 at 3415.083 kb on - strand, within OKGIIK_15635 at 3415.083 kb on - strand, within OKGIIK_15635 at 3415.203 kb on - strand, within OKGIIK_15635 at 3415.203 kb on - strand, within OKGIIK_15635 at 3415.301 kb on + strand, within OKGIIK_15635 at 3415.301 kb on + strand, within OKGIIK_15635 at 3415.302 kb on - strand, within OKGIIK_15635 at 3415.302 kb on - strand, within OKGIIK_15635 at 3415.302 kb on - strand, within OKGIIK_15635 at 3415.302 kb on - strand, within OKGIIK_15635 at 3415.302 kb on - strand, within OKGIIK_15635 at 3415.337 kb on + strand, within OKGIIK_15635 at 3415.338 kb on - strand, within OKGIIK_15635 at 3415.338 kb on - strand, within OKGIIK_15635 at 3415.338 kb on - strand, within OKGIIK_15635 at 3415.338 kb on - strand, within OKGIIK_15635 at 3415.460 kb on + strand, within OKGIIK_15635 at 3415.460 kb on + strand, within OKGIIK_15635 at 3415.460 kb on + strand, within OKGIIK_15635 at 3415.460 kb on + strand, within OKGIIK_15635 at 3415.461 kb on - strand, within OKGIIK_15635 at 3415.574 kb on + strand, within OKGIIK_15635 at 3415.631 kb on + strand, within OKGIIK_15635 at 3415.631 kb on + strand, within OKGIIK_15635 at 3415.631 kb on + strand, within OKGIIK_15635 at 3415.631 kb on + strand, within OKGIIK_15635 at 3415.631 kb on + strand, within OKGIIK_15635 at 3415.631 kb on + strand, within OKGIIK_15635 at 3415.632 kb on - strand, within OKGIIK_15635 at 3415.632 kb on - strand, within OKGIIK_15635 at 3415.632 kb on - strand, within OKGIIK_15635 at 3415.632 kb on - strand, within OKGIIK_15635 at 3415.632 kb on - strand, within OKGIIK_15635 at 3415.632 kb on - strand, within OKGIIK_15635
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 3,413,766 + -1.2 3,413,766 + +1.9 3,413,766 + -0.8 3,413,767 - -0.1 3,413,767 - -1.1 3,413,767 - -1.8 3,413,767 - -1.1 3,413,907 + -1.0 3,413,907 + -1.6 3,413,907 + -1.9 3,413,907 + -0.8 3,413,907 + +1.3 3,413,908 - -0.5 3,413,908 - -0.3 3,413,908 - -0.6 3,413,908 - -1.1 3,414,219 + OKGIIK_15630 0.48 -0.1 3,414,219 + OKGIIK_15630 0.48 +0.7 3,414,219 + OKGIIK_15630 0.48 -3.2 3,414,219 + OKGIIK_15630 0.48 +1.0 3,414,219 + OKGIIK_15630 0.48 -0.6 3,414,219 + OKGIIK_15630 0.48 -0.5 3,414,219 + OKGIIK_15630 0.48 -1.1 3,414,219 + OKGIIK_15630 0.48 -0.5 3,414,219 + OKGIIK_15630 0.48 -1.6 3,414,219 + OKGIIK_15630 0.48 -1.1 3,414,220 - OKGIIK_15630 0.48 -2.1 3,414,220 - OKGIIK_15630 0.48 -0.8 3,414,220 - OKGIIK_15630 0.48 +0.8 3,414,220 - OKGIIK_15630 0.48 -1.3 3,414,220 - OKGIIK_15630 0.48 +1.5 3,414,220 - OKGIIK_15630 0.48 -1.3 3,414,220 - OKGIIK_15630 0.48 -1.4 3,414,264 + OKGIIK_15630 0.54 +0.1 3,414,264 + OKGIIK_15630 0.54 -0.6 3,414,264 + OKGIIK_15630 0.54 -0.5 3,414,264 + OKGIIK_15630 0.54 +0.7 3,414,264 + OKGIIK_15630 0.54 -2.2 3,414,264 + OKGIIK_15630 0.54 -0.3 3,414,264 + OKGIIK_15630 0.54 +0.4 3,414,264 + OKGIIK_15630 0.54 +0.1 3,414,264 + OKGIIK_15630 0.54 -0.5 3,414,264 + OKGIIK_15630 0.54 -1.1 3,414,265 - OKGIIK_15630 0.54 -0.1 3,414,265 - OKGIIK_15630 0.54 -0.9 3,414,265 - OKGIIK_15630 0.54 +0.2 3,414,265 - OKGIIK_15630 0.54 +0.1 3,414,265 - OKGIIK_15630 0.54 -0.5 3,414,265 - OKGIIK_15630 0.54 -1.8 3,414,265 - OKGIIK_15630 0.54 -1.6 3,414,265 - OKGIIK_15630 0.54 -1.9 3,414,265 - OKGIIK_15630 0.54 -0.1 3,414,313 - OKGIIK_15630 0.60 +0.1 3,414,313 - OKGIIK_15630 0.60 +0.1 3,414,558 + -0.8 3,414,558 + -1.6 3,414,558 + -0.6 3,414,558 + -0.5 3,414,558 + -0.5 3,414,559 - -1.1 3,414,559 - +0.1 3,414,630 + -1.8 3,414,631 - -1.3 3,414,631 - -0.5 3,414,631 - -1.0 3,414,631 - -0.5 3,414,631 - +0.5 3,414,692 - +0.3 3,414,692 - -0.6 3,414,736 - +0.5 3,415,082 + OKGIIK_15635 0.38 +0.8 3,415,082 + OKGIIK_15635 0.38 -0.0 3,415,082 + OKGIIK_15635 0.38 +0.2 3,415,082 + OKGIIK_15635 0.38 -2.0 3,415,082 + OKGIIK_15635 0.38 -1.0 3,415,083 - OKGIIK_15635 0.38 -0.5 3,415,083 - OKGIIK_15635 0.38 -0.9 3,415,083 - OKGIIK_15635 0.38 +1.0 3,415,083 - OKGIIK_15635 0.38 -1.0 3,415,083 - OKGIIK_15635 0.38 +0.2 3,415,203 - OKGIIK_15635 0.48 -1.0 3,415,203 - OKGIIK_15635 0.48 -1.4 3,415,301 + OKGIIK_15635 0.56 -1.3 3,415,301 + OKGIIK_15635 0.56 -0.4 3,415,302 - OKGIIK_15635 0.57 -0.9 3,415,302 - OKGIIK_15635 0.57 -0.5 3,415,302 - OKGIIK_15635 0.57 +0.2 3,415,302 - OKGIIK_15635 0.57 -0.4 3,415,302 - OKGIIK_15635 0.57 +0.4 3,415,337 + OKGIIK_15635 0.59 -0.8 3,415,338 - OKGIIK_15635 0.60 +0.9 3,415,338 - OKGIIK_15635 0.60 -1.3 3,415,338 - OKGIIK_15635 0.60 +0.6 3,415,338 - OKGIIK_15635 0.60 -0.7 3,415,460 + OKGIIK_15635 0.70 -1.9 3,415,460 + OKGIIK_15635 0.70 -0.9 3,415,460 + OKGIIK_15635 0.70 +0.0 3,415,460 + OKGIIK_15635 0.70 -1.6 3,415,461 - OKGIIK_15635 0.70 +0.1 3,415,574 + OKGIIK_15635 0.79 -0.6 3,415,631 + OKGIIK_15635 0.84 +0.4 3,415,631 + OKGIIK_15635 0.84 +0.5 3,415,631 + OKGIIK_15635 0.84 -0.6 3,415,631 + OKGIIK_15635 0.84 +0.5 3,415,631 + OKGIIK_15635 0.84 +0.1 3,415,631 + OKGIIK_15635 0.84 +0.2 3,415,632 - OKGIIK_15635 0.84 +0.4 3,415,632 - OKGIIK_15635 0.84 -0.8 3,415,632 - OKGIIK_15635 0.84 -0.8 3,415,632 - OKGIIK_15635 0.84 +0.4 3,415,632 - OKGIIK_15635 0.84 +0.9 3,415,632 - OKGIIK_15635 0.84 +0.4
Or see this region's nucleotide sequence