Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt agaS and mngR are separated by 9 nucleotides mngR and zwf are separated by 302 nucleotides
OKGIIK_14350: agaS - iron dicitrate transport regulator FecR, at 3,134,931 to 3,135,962
agaS
OKGIIK_14355: mngR - GntR family transcriptional regulator, at 3,135,972 to 3,136,724
mngR
OKGIIK_14360: zwf - glucose-6-phosphate dehydrogenase, at 3,137,027 to 3,138,490
zwf
Position (kb)
3135
3136
3137 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3135.017 kb on - strand at 3135.114 kb on + strand, within agaS at 3135.114 kb on + strand, within agaS at 3135.114 kb on + strand, within agaS at 3135.114 kb on + strand, within agaS at 3135.114 kb on + strand, within agaS at 3135.115 kb on - strand, within agaS at 3135.499 kb on + strand, within agaS at 3135.499 kb on + strand, within agaS at 3135.499 kb on + strand, within agaS at 3135.499 kb on + strand, within agaS at 3135.499 kb on + strand, within agaS at 3135.499 kb on + strand, within agaS at 3135.499 kb on + strand, within agaS at 3135.499 kb on + strand, within agaS at 3135.499 kb on + strand, within agaS at 3135.500 kb on - strand, within agaS at 3135.500 kb on - strand, within agaS at 3135.500 kb on - strand, within agaS at 3135.500 kb on - strand, within agaS at 3135.500 kb on - strand, within agaS at 3135.500 kb on - strand, within agaS at 3135.500 kb on - strand, within agaS at 3135.500 kb on - strand, within agaS at 3135.500 kb on - strand, within agaS at 3135.500 kb on - strand, within agaS at 3135.715 kb on + strand, within agaS at 3135.715 kb on + strand, within agaS at 3135.716 kb on - strand, within agaS at 3135.716 kb on - strand, within agaS at 3135.716 kb on - strand, within agaS at 3135.776 kb on + strand, within agaS at 3135.778 kb on + strand, within agaS at 3135.778 kb on + strand, within agaS at 3135.778 kb on + strand, within agaS at 3135.779 kb on - strand, within agaS at 3135.779 kb on - strand, within agaS at 3135.779 kb on - strand, within agaS at 3135.779 kb on - strand, within agaS at 3135.779 kb on - strand, within agaS at 3135.779 kb on - strand, within agaS at 3135.779 kb on - strand, within agaS at 3135.779 kb on - strand, within agaS at 3135.779 kb on - strand, within agaS at 3135.779 kb on - strand, within agaS at 3135.779 kb on - strand, within agaS at 3135.779 kb on - strand, within agaS at 3135.779 kb on - strand, within agaS at 3135.788 kb on - strand, within agaS at 3135.937 kb on + strand at 3135.937 kb on + strand at 3135.937 kb on + strand at 3135.937 kb on + strand at 3135.937 kb on + strand at 3135.937 kb on + strand at 3135.937 kb on + strand at 3135.938 kb on - strand at 3135.938 kb on - strand at 3136.003 kb on + strand at 3136.003 kb on + strand at 3136.003 kb on + strand at 3136.003 kb on + strand at 3136.003 kb on + strand at 3136.003 kb on + strand at 3136.003 kb on + strand at 3136.004 kb on - strand at 3136.004 kb on - strand at 3136.004 kb on - strand at 3136.018 kb on + strand at 3136.019 kb on - strand at 3136.198 kb on + strand, within mngR at 3136.198 kb on + strand, within mngR at 3136.198 kb on + strand, within mngR at 3136.198 kb on + strand, within mngR at 3136.198 kb on + strand, within mngR at 3136.199 kb on - strand, within mngR at 3136.199 kb on - strand, within mngR at 3136.199 kb on - strand, within mngR at 3136.654 kb on + strand at 3136.654 kb on + strand at 3136.654 kb on + strand at 3136.654 kb on + strand at 3136.655 kb on - strand at 3136.655 kb on - strand at 3136.735 kb on + strand at 3136.735 kb on + strand at 3136.736 kb on - strand at 3136.741 kb on + strand at 3136.741 kb on + strand at 3136.742 kb on - strand at 3136.849 kb on - strand at 3136.916 kb on + strand at 3136.916 kb on + strand at 3136.916 kb on + strand at 3136.916 kb on + strand at 3136.916 kb on + strand at 3136.916 kb on + strand at 3136.916 kb on + strand at 3136.917 kb on - strand at 3136.917 kb on - strand at 3136.940 kb on + strand at 3136.960 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 3,135,017 - -2.1 3,135,114 + agaS OKGIIK_14350 0.18 +0.9 3,135,114 + agaS OKGIIK_14350 0.18 -0.3 3,135,114 + agaS OKGIIK_14350 0.18 -1.6 3,135,114 + agaS OKGIIK_14350 0.18 -0.5 3,135,114 + agaS OKGIIK_14350 0.18 -0.8 3,135,115 - agaS OKGIIK_14350 0.18 -0.8 3,135,499 + agaS OKGIIK_14350 0.55 +1.0 3,135,499 + agaS OKGIIK_14350 0.55 -1.6 3,135,499 + agaS OKGIIK_14350 0.55 -0.8 3,135,499 + agaS OKGIIK_14350 0.55 +1.8 3,135,499 + agaS OKGIIK_14350 0.55 +0.9 3,135,499 + agaS OKGIIK_14350 0.55 -1.5 3,135,499 + agaS OKGIIK_14350 0.55 +0.1 3,135,499 + agaS OKGIIK_14350 0.55 -1.3 3,135,499 + agaS OKGIIK_14350 0.55 -0.9 3,135,500 - agaS OKGIIK_14350 0.55 -0.2 3,135,500 - agaS OKGIIK_14350 0.55 -1.2 3,135,500 - agaS OKGIIK_14350 0.55 -1.9 3,135,500 - agaS OKGIIK_14350 0.55 -0.3 3,135,500 - agaS OKGIIK_14350 0.55 +0.2 3,135,500 - agaS OKGIIK_14350 0.55 -0.4 3,135,500 - agaS OKGIIK_14350 0.55 +2.0 3,135,500 - agaS OKGIIK_14350 0.55 +0.7 3,135,500 - agaS OKGIIK_14350 0.55 +1.1 3,135,500 - agaS OKGIIK_14350 0.55 +0.2 3,135,715 + agaS OKGIIK_14350 0.76 -1.8 3,135,715 + agaS OKGIIK_14350 0.76 +0.1 3,135,716 - agaS OKGIIK_14350 0.76 -1.2 3,135,716 - agaS OKGIIK_14350 0.76 +0.1 3,135,716 - agaS OKGIIK_14350 0.76 -0.7 3,135,776 + agaS OKGIIK_14350 0.82 -0.6 3,135,778 + agaS OKGIIK_14350 0.82 +0.4 3,135,778 + agaS OKGIIK_14350 0.82 -1.6 3,135,778 + agaS OKGIIK_14350 0.82 -0.4 3,135,779 - agaS OKGIIK_14350 0.82 +0.4 3,135,779 - agaS OKGIIK_14350 0.82 -1.6 3,135,779 - agaS OKGIIK_14350 0.82 -1.0 3,135,779 - agaS OKGIIK_14350 0.82 -0.7 3,135,779 - agaS OKGIIK_14350 0.82 +0.8 3,135,779 - agaS OKGIIK_14350 0.82 +1.2 3,135,779 - agaS OKGIIK_14350 0.82 -0.1 3,135,779 - agaS OKGIIK_14350 0.82 +0.8 3,135,779 - agaS OKGIIK_14350 0.82 +2.3 3,135,779 - agaS OKGIIK_14350 0.82 +0.4 3,135,779 - agaS OKGIIK_14350 0.82 -0.6 3,135,779 - agaS OKGIIK_14350 0.82 +0.7 3,135,779 - agaS OKGIIK_14350 0.82 -0.1 3,135,788 - agaS OKGIIK_14350 0.83 -0.2 3,135,937 + -0.9 3,135,937 + +0.0 3,135,937 + -0.8 3,135,937 + +1.1 3,135,937 + -0.5 3,135,937 + +0.8 3,135,937 + -0.2 3,135,938 - -0.3 3,135,938 - -0.9 3,136,003 + -0.4 3,136,003 + +0.8 3,136,003 + -1.3 3,136,003 + -0.9 3,136,003 + -0.8 3,136,003 + -0.3 3,136,003 + +0.2 3,136,004 - -0.1 3,136,004 - -0.3 3,136,004 - -0.5 3,136,018 + +0.9 3,136,019 - +0.0 3,136,198 + mngR OKGIIK_14355 0.30 -1.6 3,136,198 + mngR OKGIIK_14355 0.30 -0.5 3,136,198 + mngR OKGIIK_14355 0.30 -0.8 3,136,198 + mngR OKGIIK_14355 0.30 +0.5 3,136,198 + mngR OKGIIK_14355 0.30 -0.6 3,136,199 - mngR OKGIIK_14355 0.30 +0.5 3,136,199 - mngR OKGIIK_14355 0.30 +0.6 3,136,199 - mngR OKGIIK_14355 0.30 +0.1 3,136,654 + +0.8 3,136,654 + -1.7 3,136,654 + -0.9 3,136,654 + -0.6 3,136,655 - -1.1 3,136,655 - -0.3 3,136,735 + -1.3 3,136,735 + +0.2 3,136,736 - -0.7 3,136,741 + -1.0 3,136,741 + -2.5 3,136,742 - -2.9 3,136,849 - -1.3 3,136,916 + -1.3 3,136,916 + -0.8 3,136,916 + +0.9 3,136,916 + -0.1 3,136,916 + -1.9 3,136,916 + -1.0 3,136,916 + +0.1 3,136,917 - -1.8 3,136,917 - -1.5 3,136,940 + +0.5 3,136,960 + +0.1
Or see this region's nucleotide sequence