Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06445 and MPMX19_06446 are separated by 218 nucleotides MPMX19_06446 and MPMX19_06447 are separated by 241 nucleotides MPMX19_06447 and MPMX19_06448 are separated by 34 nucleotides
MPMX19_06445: MPMX19_06445 - putative membrane protein, at 219,436 to 220,068
_06445
MPMX19_06446: MPMX19_06446 - hypothetical protein, at 220,287 to 220,640
_06446
MPMX19_06447: MPMX19_06447 - hypothetical protein, at 220,882 to 221,283
_06447
MPMX19_06448: MPMX19_06448 - hypothetical protein, at 221,318 to 222,112
_06448
Position (kb) 220
221
222 Strain fitness (log2 ratio) -2
-1
0
1 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.988 kb on + strand, within MPMX19_06448 at 222.163 kb on + strand at 222.163 kb on + strand at 222.163 kb on + strand at 222.163 kb on + strand at 222.164 kb on - strand at 222.164 kb on - strand at 222.238 kb on + strand at 222.238 kb on + strand at 222.239 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 221,889 + MPMX19_06448 0.72 -1.0 221,889 + MPMX19_06448 0.72 -1.1 221,889 + MPMX19_06448 0.72 +0.1 221,889 + MPMX19_06448 0.72 -0.8 221,889 + MPMX19_06448 0.72 -0.2 221,889 + MPMX19_06448 0.72 -0.8 221,889 + MPMX19_06448 0.72 -0.4 221,889 + MPMX19_06448 0.72 +0.3 221,889 + MPMX19_06448 0.72 -1.2 221,889 + MPMX19_06448 0.72 -1.2 221,889 + MPMX19_06448 0.72 -0.3 221,889 + MPMX19_06448 0.72 +1.0 221,889 + MPMX19_06448 0.72 +0.3 221,889 + MPMX19_06448 0.72 -0.3 221,889 + MPMX19_06448 0.72 -1.6 221,988 + MPMX19_06448 0.84 -1.8 222,163 + +0.6 222,163 + -0.9 222,163 + +1.1 222,163 + +0.0 222,164 - +0.1 222,164 - +0.3 222,238 + -2.0 222,238 + +0.4 222,239 - -1.0
Or see this region's nucleotide sequence