Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04746 and MPMX19_04747 are separated by 4 nucleotides MPMX19_04747 and MPMX19_04748 overlap by 4 nucleotides MPMX19_04748 and MPMX19_04749 overlap by 25 nucleotides
MPMX19_04746: MPMX19_04746 - hypothetical protein, at 138,315 to 138,812
_04746
MPMX19_04747: MPMX19_04747 - hypothetical protein, at 138,817 to 139,518
_04747
MPMX19_04748: MPMX19_04748 - hypothetical protein, at 139,515 to 140,084
_04748
MPMX19_04749: MPMX19_04749 - hypothetical protein, at 140,060 to 141,484
_04749
Position (kb)
139
140
141 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 138.544 kb on + strand, within MPMX19_04746 at 138.544 kb on + strand, within MPMX19_04746 at 138.544 kb on + strand, within MPMX19_04746 at 138.544 kb on + strand, within MPMX19_04746 at 138.544 kb on + strand, within MPMX19_04746 at 138.544 kb on + strand, within MPMX19_04746 at 138.544 kb on + strand, within MPMX19_04746 at 138.544 kb on + strand, within MPMX19_04746 at 138.545 kb on - strand, within MPMX19_04746 at 138.545 kb on - strand, within MPMX19_04746 at 138.545 kb on - strand, within MPMX19_04746 at 138.545 kb on - strand, within MPMX19_04746 at 138.545 kb on - strand, within MPMX19_04746 at 138.545 kb on - strand, within MPMX19_04746 at 138.545 kb on - strand, within MPMX19_04746 at 138.545 kb on - strand, within MPMX19_04746 at 138.545 kb on - strand, within MPMX19_04746 at 138.545 kb on - strand, within MPMX19_04746 at 138.545 kb on - strand, within MPMX19_04746 at 138.552 kb on + strand, within MPMX19_04746 at 138.552 kb on + strand, within MPMX19_04746 at 138.552 kb on + strand, within MPMX19_04746 at 138.553 kb on - strand, within MPMX19_04746 at 138.553 kb on - strand, within MPMX19_04746 at 138.553 kb on - strand, within MPMX19_04746 at 138.699 kb on + strand, within MPMX19_04746 at 138.699 kb on + strand, within MPMX19_04746 at 138.699 kb on + strand, within MPMX19_04746 at 138.699 kb on + strand, within MPMX19_04746 at 138.699 kb on + strand, within MPMX19_04746 at 138.699 kb on + strand, within MPMX19_04746 at 138.699 kb on + strand, within MPMX19_04746 at 138.699 kb on + strand, within MPMX19_04746 at 138.699 kb on + strand, within MPMX19_04746 at 138.700 kb on - strand, within MPMX19_04746 at 138.700 kb on - strand, within MPMX19_04746 at 138.700 kb on - strand, within MPMX19_04746 at 138.700 kb on - strand, within MPMX19_04746 at 138.700 kb on - strand, within MPMX19_04746 at 139.581 kb on + strand, within MPMX19_04748 at 139.581 kb on + strand, within MPMX19_04748 at 139.581 kb on + strand, within MPMX19_04748 at 139.581 kb on + strand, within MPMX19_04748 at 139.581 kb on + strand, within MPMX19_04748 at 139.581 kb on + strand, within MPMX19_04748 at 139.581 kb on + strand, within MPMX19_04748 at 139.582 kb on - strand, within MPMX19_04748 at 139.582 kb on - strand, within MPMX19_04748 at 139.582 kb on - strand, within MPMX19_04748 at 139.582 kb on - strand, within MPMX19_04748 at 139.668 kb on + strand, within MPMX19_04748 at 139.668 kb on + strand, within MPMX19_04748 at 139.668 kb on + strand, within MPMX19_04748 at 139.668 kb on + strand, within MPMX19_04748 at 139.668 kb on + strand, within MPMX19_04748 at 139.668 kb on + strand, within MPMX19_04748 at 139.668 kb on + strand, within MPMX19_04748 at 139.668 kb on + strand, within MPMX19_04748 at 139.669 kb on - strand, within MPMX19_04748 at 139.669 kb on - strand, within MPMX19_04748 at 139.752 kb on + strand, within MPMX19_04748 at 139.752 kb on + strand, within MPMX19_04748 at 139.752 kb on + strand, within MPMX19_04748 at 139.752 kb on + strand, within MPMX19_04748 at 139.752 kb on + strand, within MPMX19_04748 at 139.752 kb on + strand, within MPMX19_04748 at 139.752 kb on + strand, within MPMX19_04748 at 139.752 kb on + strand, within MPMX19_04748 at 139.753 kb on - strand, within MPMX19_04748 at 139.753 kb on - strand, within MPMX19_04748 at 139.753 kb on - strand, within MPMX19_04748 at 139.753 kb on - strand, within MPMX19_04748 at 139.753 kb on - strand, within MPMX19_04748 at 139.764 kb on + strand, within MPMX19_04748 at 139.764 kb on + strand, within MPMX19_04748 at 139.764 kb on + strand, within MPMX19_04748 at 139.764 kb on + strand, within MPMX19_04748 at 139.764 kb on + strand, within MPMX19_04748 at 139.765 kb on - strand, within MPMX19_04748 at 139.765 kb on - strand, within MPMX19_04748 at 139.765 kb on - strand, within MPMX19_04748 at 140.345 kb on + strand, within MPMX19_04749 at 140.346 kb on - strand, within MPMX19_04749 at 140.346 kb on - strand, within MPMX19_04749 at 140.346 kb on - strand, within MPMX19_04749 at 140.627 kb on + strand, within MPMX19_04749 at 140.628 kb on - strand, within MPMX19_04749 at 140.628 kb on - strand, within MPMX19_04749 at 140.628 kb on - strand, within MPMX19_04749 at 140.628 kb on - strand, within MPMX19_04749 at 140.628 kb on - strand, within MPMX19_04749 at 140.798 kb on + strand, within MPMX19_04749 at 140.825 kb on + strand, within MPMX19_04749 at 140.826 kb on - strand, within MPMX19_04749 at 140.847 kb on - strand, within MPMX19_04749
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 138,544 + MPMX19_04746 0.46 -2.1 138,544 + MPMX19_04746 0.46 +0.8 138,544 + MPMX19_04746 0.46 +0.2 138,544 + MPMX19_04746 0.46 +1.1 138,544 + MPMX19_04746 0.46 +0.2 138,544 + MPMX19_04746 0.46 -0.2 138,544 + MPMX19_04746 0.46 +1.7 138,544 + MPMX19_04746 0.46 +0.7 138,545 - MPMX19_04746 0.46 +0.1 138,545 - MPMX19_04746 0.46 +0.7 138,545 - MPMX19_04746 0.46 +0.3 138,545 - MPMX19_04746 0.46 -0.0 138,545 - MPMX19_04746 0.46 +1.7 138,545 - MPMX19_04746 0.46 -0.1 138,545 - MPMX19_04746 0.46 -0.3 138,545 - MPMX19_04746 0.46 -0.3 138,545 - MPMX19_04746 0.46 -0.4 138,545 - MPMX19_04746 0.46 -0.9 138,545 - MPMX19_04746 0.46 +1.9 138,552 + MPMX19_04746 0.48 +0.6 138,552 + MPMX19_04746 0.48 -1.5 138,552 + MPMX19_04746 0.48 +0.1 138,553 - MPMX19_04746 0.48 +0.7 138,553 - MPMX19_04746 0.48 -1.2 138,553 - MPMX19_04746 0.48 -1.8 138,699 + MPMX19_04746 0.77 +0.2 138,699 + MPMX19_04746 0.77 -0.2 138,699 + MPMX19_04746 0.77 -0.4 138,699 + MPMX19_04746 0.77 +1.4 138,699 + MPMX19_04746 0.77 -0.1 138,699 + MPMX19_04746 0.77 +1.2 138,699 + MPMX19_04746 0.77 -1.2 138,699 + MPMX19_04746 0.77 +0.0 138,699 + MPMX19_04746 0.77 -1.3 138,700 - MPMX19_04746 0.77 -0.1 138,700 - MPMX19_04746 0.77 +0.7 138,700 - MPMX19_04746 0.77 -1.7 138,700 - MPMX19_04746 0.77 -0.5 138,700 - MPMX19_04746 0.77 +1.3 139,581 + MPMX19_04748 0.12 +0.7 139,581 + MPMX19_04748 0.12 -0.3 139,581 + MPMX19_04748 0.12 -2.0 139,581 + MPMX19_04748 0.12 -0.1 139,581 + MPMX19_04748 0.12 +0.3 139,581 + MPMX19_04748 0.12 +0.5 139,581 + MPMX19_04748 0.12 +0.1 139,582 - MPMX19_04748 0.12 -1.1 139,582 - MPMX19_04748 0.12 +0.3 139,582 - MPMX19_04748 0.12 -0.6 139,582 - MPMX19_04748 0.12 +2.3 139,668 + MPMX19_04748 0.27 -0.6 139,668 + MPMX19_04748 0.27 -0.3 139,668 + MPMX19_04748 0.27 -0.6 139,668 + MPMX19_04748 0.27 +0.1 139,668 + MPMX19_04748 0.27 +0.4 139,668 + MPMX19_04748 0.27 +0.2 139,668 + MPMX19_04748 0.27 -1.6 139,668 + MPMX19_04748 0.27 -0.3 139,669 - MPMX19_04748 0.27 -0.3 139,669 - MPMX19_04748 0.27 -0.1 139,752 + MPMX19_04748 0.42 -1.1 139,752 + MPMX19_04748 0.42 +0.4 139,752 + MPMX19_04748 0.42 +1.1 139,752 + MPMX19_04748 0.42 -0.5 139,752 + MPMX19_04748 0.42 +0.9 139,752 + MPMX19_04748 0.42 +0.3 139,752 + MPMX19_04748 0.42 -0.6 139,752 + MPMX19_04748 0.42 +0.4 139,753 - MPMX19_04748 0.42 -0.4 139,753 - MPMX19_04748 0.42 -0.5 139,753 - MPMX19_04748 0.42 +0.4 139,753 - MPMX19_04748 0.42 -1.0 139,753 - MPMX19_04748 0.42 -2.2 139,764 + MPMX19_04748 0.44 -1.8 139,764 + MPMX19_04748 0.44 +1.7 139,764 + MPMX19_04748 0.44 -0.6 139,764 + MPMX19_04748 0.44 +0.4 139,764 + MPMX19_04748 0.44 -0.7 139,765 - MPMX19_04748 0.44 +0.5 139,765 - MPMX19_04748 0.44 -0.5 139,765 - MPMX19_04748 0.44 +0.2 140,345 + MPMX19_04749 0.20 -0.4 140,346 - MPMX19_04749 0.20 +1.7 140,346 - MPMX19_04749 0.20 -1.3 140,346 - MPMX19_04749 0.20 -0.4 140,627 + MPMX19_04749 0.40 -0.0 140,628 - MPMX19_04749 0.40 +0.0 140,628 - MPMX19_04749 0.40 -1.1 140,628 - MPMX19_04749 0.40 -0.8 140,628 - MPMX19_04749 0.40 -0.3 140,628 - MPMX19_04749 0.40 -1.8 140,798 + MPMX19_04749 0.52 +0.2 140,825 + MPMX19_04749 0.54 +0.2 140,826 - MPMX19_04749 0.54 -1.6 140,847 - MPMX19_04749 0.55 -0.5
Or see this region's nucleotide sequence