Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04493 and MPMX19_04494 are separated by 245 nucleotides MPMX19_04494 and MPMX19_04495 are separated by 1 nucleotides
MPMX19_04493: MPMX19_04493 - PCP degradation transcriptional activation protein, at 860,767 to 861,780
_04493
MPMX19_04494: MPMX19_04494 - p-hydroxybenzoic acid efflux pump subunit AaeA, at 862,026 to 862,979
_04494
MPMX19_04495: MPMX19_04495 - hypothetical protein, at 862,981 to 864,207
_04495
Position (kb)
862
863 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 861.097 kb on + strand, within MPMX19_04493 at 861.097 kb on + strand, within MPMX19_04493 at 861.097 kb on + strand, within MPMX19_04493 at 861.097 kb on + strand, within MPMX19_04493 at 861.097 kb on + strand, within MPMX19_04493 at 861.098 kb on - strand, within MPMX19_04493 at 861.098 kb on - strand, within MPMX19_04493 at 861.098 kb on - strand, within MPMX19_04493 at 861.434 kb on + strand, within MPMX19_04493 at 861.434 kb on + strand, within MPMX19_04493 at 861.434 kb on + strand, within MPMX19_04493 at 861.435 kb on - strand, within MPMX19_04493 at 861.526 kb on + strand, within MPMX19_04493 at 861.526 kb on + strand, within MPMX19_04493 at 861.526 kb on + strand, within MPMX19_04493 at 861.526 kb on + strand, within MPMX19_04493 at 861.526 kb on + strand, within MPMX19_04493 at 861.527 kb on - strand, within MPMX19_04493 at 861.527 kb on - strand, within MPMX19_04493 at 861.527 kb on - strand, within MPMX19_04493 at 861.527 kb on - strand, within MPMX19_04493 at 861.527 kb on - strand, within MPMX19_04493 at 861.637 kb on + strand, within MPMX19_04493 at 861.637 kb on + strand, within MPMX19_04493 at 861.637 kb on + strand, within MPMX19_04493 at 861.637 kb on + strand, within MPMX19_04493 at 861.637 kb on + strand, within MPMX19_04493 at 861.638 kb on - strand, within MPMX19_04493 at 861.638 kb on - strand, within MPMX19_04493 at 861.638 kb on - strand, within MPMX19_04493 at 861.638 kb on - strand, within MPMX19_04493 at 861.638 kb on - strand, within MPMX19_04493 at 861.779 kb on - strand at 861.812 kb on + strand at 861.812 kb on + strand at 861.813 kb on - strand at 861.813 kb on - strand at 861.817 kb on - strand at 861.817 kb on - strand at 861.817 kb on - strand at 861.817 kb on - strand at 861.857 kb on + strand at 861.857 kb on + strand at 861.857 kb on + strand at 861.858 kb on - strand at 861.858 kb on - strand at 861.858 kb on - strand at 861.858 kb on - strand at 861.912 kb on + strand at 861.913 kb on - strand at 861.913 kb on - strand at 861.913 kb on - strand at 861.926 kb on - strand at 861.926 kb on - strand at 862.298 kb on + strand, within MPMX19_04494 at 862.298 kb on + strand, within MPMX19_04494 at 862.298 kb on + strand, within MPMX19_04494 at 862.298 kb on + strand, within MPMX19_04494 at 862.298 kb on + strand, within MPMX19_04494 at 862.298 kb on + strand, within MPMX19_04494 at 862.298 kb on + strand, within MPMX19_04494 at 862.298 kb on + strand, within MPMX19_04494 at 862.298 kb on + strand, within MPMX19_04494 at 862.299 kb on - strand, within MPMX19_04494 at 862.299 kb on - strand, within MPMX19_04494 at 862.368 kb on + strand, within MPMX19_04494 at 862.368 kb on + strand, within MPMX19_04494 at 862.368 kb on + strand, within MPMX19_04494 at 862.369 kb on - strand, within MPMX19_04494 at 862.369 kb on - strand, within MPMX19_04494 at 862.369 kb on - strand, within MPMX19_04494 at 862.369 kb on - strand, within MPMX19_04494 at 862.380 kb on + strand, within MPMX19_04494 at 862.380 kb on + strand, within MPMX19_04494 at 862.381 kb on - strand, within MPMX19_04494 at 862.381 kb on - strand, within MPMX19_04494 at 862.381 kb on - strand, within MPMX19_04494 at 862.381 kb on - strand, within MPMX19_04494 at 862.381 kb on - strand, within MPMX19_04494 at 862.381 kb on - strand, within MPMX19_04494 at 862.846 kb on - strand, within MPMX19_04494 at 863.365 kb on + strand, within MPMX19_04495 at 863.365 kb on + strand, within MPMX19_04495 at 863.365 kb on + strand, within MPMX19_04495 at 863.366 kb on - strand, within MPMX19_04495 at 863.366 kb on - strand, within MPMX19_04495 at 863.551 kb on + strand, within MPMX19_04495 at 863.551 kb on + strand, within MPMX19_04495 at 863.551 kb on + strand, within MPMX19_04495 at 863.551 kb on + strand, within MPMX19_04495 at 863.620 kb on + strand, within MPMX19_04495 at 863.719 kb on + strand, within MPMX19_04495 at 863.719 kb on + strand, within MPMX19_04495 at 863.720 kb on - strand, within MPMX19_04495 at 863.720 kb on - strand, within MPMX19_04495
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 861,097 + MPMX19_04493 0.33 -0.7 861,097 + MPMX19_04493 0.33 -0.6 861,097 + MPMX19_04493 0.33 -0.7 861,097 + MPMX19_04493 0.33 -2.2 861,097 + MPMX19_04493 0.33 -0.3 861,098 - MPMX19_04493 0.33 -0.5 861,098 - MPMX19_04493 0.33 +0.1 861,098 - MPMX19_04493 0.33 +1.0 861,434 + MPMX19_04493 0.66 +0.7 861,434 + MPMX19_04493 0.66 -0.6 861,434 + MPMX19_04493 0.66 -0.1 861,435 - MPMX19_04493 0.66 -1.5 861,526 + MPMX19_04493 0.75 -0.6 861,526 + MPMX19_04493 0.75 +0.9 861,526 + MPMX19_04493 0.75 +0.1 861,526 + MPMX19_04493 0.75 -0.2 861,526 + MPMX19_04493 0.75 +1.0 861,527 - MPMX19_04493 0.75 -0.3 861,527 - MPMX19_04493 0.75 -0.3 861,527 - MPMX19_04493 0.75 +1.1 861,527 - MPMX19_04493 0.75 -1.6 861,527 - MPMX19_04493 0.75 -2.3 861,637 + MPMX19_04493 0.86 +0.7 861,637 + MPMX19_04493 0.86 -0.5 861,637 + MPMX19_04493 0.86 -0.1 861,637 + MPMX19_04493 0.86 -0.4 861,637 + MPMX19_04493 0.86 -1.7 861,638 - MPMX19_04493 0.86 -0.3 861,638 - MPMX19_04493 0.86 -1.6 861,638 - MPMX19_04493 0.86 +0.8 861,638 - MPMX19_04493 0.86 +0.4 861,638 - MPMX19_04493 0.86 -0.1 861,779 - -0.7 861,812 + +0.5 861,812 + -1.0 861,813 - +0.3 861,813 - -0.6 861,817 - -1.3 861,817 - -1.5 861,817 - +0.4 861,817 - -1.2 861,857 + -0.2 861,857 + +0.0 861,857 + -0.4 861,858 - -0.4 861,858 - -0.2 861,858 - +0.3 861,858 - -0.9 861,912 + +0.2 861,913 - -0.5 861,913 - +0.9 861,913 - -0.2 861,926 - -0.5 861,926 - -0.7 862,298 + MPMX19_04494 0.29 +0.7 862,298 + MPMX19_04494 0.29 -0.4 862,298 + MPMX19_04494 0.29 +0.1 862,298 + MPMX19_04494 0.29 -0.9 862,298 + MPMX19_04494 0.29 +0.1 862,298 + MPMX19_04494 0.29 +0.3 862,298 + MPMX19_04494 0.29 +0.5 862,298 + MPMX19_04494 0.29 +0.4 862,298 + MPMX19_04494 0.29 -1.2 862,299 - MPMX19_04494 0.29 -1.1 862,299 - MPMX19_04494 0.29 +1.9 862,368 + MPMX19_04494 0.36 +0.4 862,368 + MPMX19_04494 0.36 -0.3 862,368 + MPMX19_04494 0.36 +0.4 862,369 - MPMX19_04494 0.36 +0.5 862,369 - MPMX19_04494 0.36 +0.1 862,369 - MPMX19_04494 0.36 +0.7 862,369 - MPMX19_04494 0.36 +0.7 862,380 + MPMX19_04494 0.37 +0.3 862,380 + MPMX19_04494 0.37 -2.7 862,381 - MPMX19_04494 0.37 -2.0 862,381 - MPMX19_04494 0.37 +0.7 862,381 - MPMX19_04494 0.37 -0.1 862,381 - MPMX19_04494 0.37 -0.6 862,381 - MPMX19_04494 0.37 +0.5 862,381 - MPMX19_04494 0.37 +0.4 862,846 - MPMX19_04494 0.86 +0.5 863,365 + MPMX19_04495 0.31 +0.0 863,365 + MPMX19_04495 0.31 +0.4 863,365 + MPMX19_04495 0.31 -0.9 863,366 - MPMX19_04495 0.31 +0.7 863,366 - MPMX19_04495 0.31 -0.5 863,551 + MPMX19_04495 0.46 +0.5 863,551 + MPMX19_04495 0.46 -0.2 863,551 + MPMX19_04495 0.46 -0.2 863,551 + MPMX19_04495 0.46 +0.0 863,620 + MPMX19_04495 0.52 -0.0 863,719 + MPMX19_04495 0.60 -0.7 863,719 + MPMX19_04495 0.60 +1.0 863,720 - MPMX19_04495 0.60 -0.1 863,720 - MPMX19_04495 0.60 -1.0
Or see this region's nucleotide sequence