Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04264 and MPMX19_04265 are separated by 34 nucleotides MPMX19_04265 and MPMX19_04266 are separated by 145 nucleotides MPMX19_04266 and MPMX19_04267 are separated by 195 nucleotides MPMX19_04267 and MPMX19_04268 are separated by 54 nucleotides
MPMX19_04264: MPMX19_04264 - hypothetical protein, at 624,367 to 625,119
_04264
MPMX19_04265: MPMX19_04265 - Aliphatic sulfonates import ATP-binding protein SsuB, at 625,154 to 625,831
_04265
MPMX19_04266: MPMX19_04266 - hypothetical protein, at 625,977 to 626,387
_04266
MPMX19_04267: MPMX19_04267 - hypothetical protein, at 626,583 to 627,113
_04267
MPMX19_04268: MPMX19_04268 - 2-keto-3-deoxygluconate permease, at 627,168 to 628,184
_04268
Position (kb) 625
626
627 Strain fitness (log2 ratio) -2
-1
0
1 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.054 kb on + strand at 625.322 kb on + strand, within MPMX19_04265 at 625.323 kb on - strand, within MPMX19_04265 at 625.323 kb on - strand, within MPMX19_04265 at 625.323 kb on - strand, within MPMX19_04265 at 625.323 kb on - strand, within MPMX19_04265 at 626.727 kb on + strand, within MPMX19_04267 at 626.727 kb on + strand, within MPMX19_04267 at 626.727 kb on + strand, within MPMX19_04267 at 626.727 kb on + strand, within MPMX19_04267 at 626.727 kb on + strand, within MPMX19_04267 at 626.727 kb on + strand, within MPMX19_04267 at 626.727 kb on + strand, within MPMX19_04267 at 626.728 kb on - strand, within MPMX19_04267 at 626.728 kb on - strand, within MPMX19_04267 at 626.728 kb on - strand, within MPMX19_04267 at 627.111 kb on + strand at 627.112 kb on - strand at 627.112 kb on - strand at 627.154 kb on + strand at 627.154 kb on + strand at 627.154 kb on + strand at 627.154 kb on + strand at 627.154 kb on + strand at 627.155 kb on - strand at 627.155 kb on - strand at 627.169 kb on + strand at 627.170 kb on - strand at 627.170 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 625,015 + MPMX19_04264 0.86 +0.6 625,015 + MPMX19_04264 0.86 +0.5 625,015 + MPMX19_04264 0.86 -0.4 625,015 + MPMX19_04264 0.86 -1.1 625,015 + MPMX19_04264 0.86 +0.2 625,015 + MPMX19_04264 0.86 +0.2 625,015 + MPMX19_04264 0.86 -0.0 625,015 + MPMX19_04264 0.86 -0.7 625,015 + MPMX19_04264 0.86 +0.0 625,015 + MPMX19_04264 0.86 -0.4 625,015 + MPMX19_04264 0.86 -2.2 625,015 + MPMX19_04264 0.86 -0.0 625,015 + MPMX19_04264 0.86 -0.2 625,015 + MPMX19_04264 0.86 -1.0 625,016 - MPMX19_04264 0.86 +0.2 625,016 - MPMX19_04264 0.86 -1.4 625,016 - MPMX19_04264 0.86 -0.6 625,016 - MPMX19_04264 0.86 -0.0 625,016 - MPMX19_04264 0.86 +0.0 625,016 - MPMX19_04264 0.86 +0.7 625,016 - MPMX19_04264 0.86 -0.0 625,016 - MPMX19_04264 0.86 +0.5 625,016 - MPMX19_04264 0.86 +0.1 625,016 - MPMX19_04264 0.86 -0.2 625,016 - MPMX19_04264 0.86 +0.9 625,016 - MPMX19_04264 0.86 -0.6 625,016 - MPMX19_04264 0.86 +0.2 625,016 - MPMX19_04264 0.86 -0.2 625,054 + -0.2 625,322 + MPMX19_04265 0.25 -0.3 625,323 - MPMX19_04265 0.25 +0.4 625,323 - MPMX19_04265 0.25 -0.5 625,323 - MPMX19_04265 0.25 -0.0 625,323 - MPMX19_04265 0.25 +0.6 626,727 + MPMX19_04267 0.27 +0.0 626,727 + MPMX19_04267 0.27 -0.9 626,727 + MPMX19_04267 0.27 -0.9 626,727 + MPMX19_04267 0.27 +0.3 626,727 + MPMX19_04267 0.27 +0.8 626,727 + MPMX19_04267 0.27 -0.7 626,727 + MPMX19_04267 0.27 +0.4 626,728 - MPMX19_04267 0.27 +0.1 626,728 - MPMX19_04267 0.27 -0.7 626,728 - MPMX19_04267 0.27 +0.2 627,111 + -0.3 627,112 - -0.6 627,112 - -0.5 627,154 + +1.1 627,154 + -0.9 627,154 + -0.1 627,154 + +0.2 627,154 + -0.3 627,155 - +0.6 627,155 - -0.0 627,169 + -1.3 627,170 - -1.7 627,170 - +0.6
Or see this region's nucleotide sequence