Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04126 and MPMX19_04127 are separated by 19 nucleotides MPMX19_04127 and MPMX19_04128 are separated by 269 nucleotides MPMX19_04128 and MPMX19_04129 overlap by 4 nucleotides
MPMX19_04126: MPMX19_04126 - hypothetical protein, at 436,696 to 437,424
_04126
MPMX19_04127: MPMX19_04127 - hypothetical protein, at 437,444 to 437,938
_04127
MPMX19_04128: MPMX19_04128 - Aldehyde oxidoreductase iron-sulfur-binding subunit PaoA, at 438,208 to 438,774
_04128
MPMX19_04129: MPMX19_04129 - Aldehyde oxidoreductase FAD-binding subunit PaoB, at 438,771 to 439,781
_04129
Position (kb) 438
439 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 437.333 kb on + strand, within MPMX19_04126 at 437.817 kb on + strand, within MPMX19_04127 at 437.818 kb on - strand, within MPMX19_04127 at 437.818 kb on - strand, within MPMX19_04127 at 437.856 kb on + strand, within MPMX19_04127 at 437.856 kb on + strand, within MPMX19_04127 at 437.856 kb on + strand, within MPMX19_04127 at 437.856 kb on + strand, within MPMX19_04127 at 437.856 kb on + strand, within MPMX19_04127 at 437.856 kb on + strand, within MPMX19_04127 at 437.857 kb on - strand, within MPMX19_04127 at 437.857 kb on - strand, within MPMX19_04127 at 437.857 kb on - strand, within MPMX19_04127 at 437.857 kb on - strand, within MPMX19_04127 at 437.868 kb on + strand, within MPMX19_04127 at 437.868 kb on + strand, within MPMX19_04127 at 437.868 kb on + strand, within MPMX19_04127 at 437.868 kb on + strand, within MPMX19_04127 at 437.868 kb on + strand, within MPMX19_04127 at 437.868 kb on + strand, within MPMX19_04127 at 437.868 kb on + strand, within MPMX19_04127 at 437.869 kb on - strand, within MPMX19_04127 at 437.869 kb on - strand, within MPMX19_04127 at 437.869 kb on - strand, within MPMX19_04127 at 437.869 kb on - strand, within MPMX19_04127 at 437.869 kb on - strand, within MPMX19_04127 at 437.869 kb on - strand, within MPMX19_04127 at 437.869 kb on - strand, within MPMX19_04127 at 437.869 kb on - strand, within MPMX19_04127 at 437.869 kb on - strand, within MPMX19_04127 at 437.869 kb on - strand, within MPMX19_04127 at 437.896 kb on + strand at 437.896 kb on + strand at 437.896 kb on + strand at 437.897 kb on - strand at 438.158 kb on + strand at 438.158 kb on + strand at 438.158 kb on + strand at 438.158 kb on + strand at 438.158 kb on + strand at 438.158 kb on + strand at 438.158 kb on + strand at 438.158 kb on + strand at 438.158 kb on + strand at 438.158 kb on + strand at 438.158 kb on + strand at 438.159 kb on - strand at 438.159 kb on - strand at 438.159 kb on - strand at 438.159 kb on - strand at 438.159 kb on - strand at 438.159 kb on - strand at 438.159 kb on - strand at 438.159 kb on - strand at 438.159 kb on - strand at 438.159 kb on - strand at 438.298 kb on - strand, within MPMX19_04128 at 438.298 kb on - strand, within MPMX19_04128 at 438.298 kb on - strand, within MPMX19_04128 at 438.298 kb on - strand, within MPMX19_04128 at 438.373 kb on + strand, within MPMX19_04128 at 438.373 kb on + strand, within MPMX19_04128 at 438.373 kb on + strand, within MPMX19_04128 at 438.373 kb on + strand, within MPMX19_04128 at 438.373 kb on + strand, within MPMX19_04128 at 438.373 kb on + strand, within MPMX19_04128 at 438.374 kb on - strand, within MPMX19_04128 at 438.374 kb on - strand, within MPMX19_04128 at 438.374 kb on - strand, within MPMX19_04128 at 438.374 kb on - strand, within MPMX19_04128 at 438.374 kb on - strand, within MPMX19_04128 at 438.586 kb on + strand, within MPMX19_04128 at 438.700 kb on + strand, within MPMX19_04128 at 438.701 kb on - strand, within MPMX19_04128 at 438.786 kb on + strand at 438.786 kb on + strand at 438.786 kb on + strand at 438.786 kb on + strand at 438.786 kb on + strand at 438.786 kb on + strand at 438.786 kb on + strand at 438.787 kb on - strand at 438.787 kb on - strand at 438.787 kb on - strand at 438.787 kb on - strand at 438.787 kb on - strand at 438.787 kb on - strand at 438.787 kb on - strand at 439.026 kb on + strand, within MPMX19_04129 at 439.026 kb on + strand, within MPMX19_04129 at 439.027 kb on - strand, within MPMX19_04129 at 439.027 kb on - strand, within MPMX19_04129 at 439.027 kb on - strand, within MPMX19_04129 at 439.027 kb on - strand, within MPMX19_04129 at 439.050 kb on + strand, within MPMX19_04129 at 439.146 kb on + strand, within MPMX19_04129 at 439.146 kb on + strand, within MPMX19_04129 at 439.146 kb on + strand, within MPMX19_04129 at 439.146 kb on + strand, within MPMX19_04129 at 439.147 kb on - strand, within MPMX19_04129 at 439.147 kb on - strand, within MPMX19_04129 at 439.147 kb on - strand, within MPMX19_04129 at 439.147 kb on - strand, within MPMX19_04129 at 439.147 kb on - strand, within MPMX19_04129 at 439.147 kb on - strand, within MPMX19_04129 at 439.147 kb on - strand, within MPMX19_04129 at 439.147 kb on - strand, within MPMX19_04129 at 439.147 kb on - strand, within MPMX19_04129 at 439.149 kb on + strand, within MPMX19_04129 at 439.149 kb on + strand, within MPMX19_04129 at 439.149 kb on + strand, within MPMX19_04129 at 439.149 kb on + strand, within MPMX19_04129 at 439.149 kb on + strand, within MPMX19_04129 at 439.149 kb on + strand, within MPMX19_04129 at 439.149 kb on + strand, within MPMX19_04129 at 439.149 kb on + strand, within MPMX19_04129 at 439.149 kb on + strand, within MPMX19_04129 at 439.149 kb on + strand, within MPMX19_04129 at 439.149 kb on + strand, within MPMX19_04129 at 439.149 kb on + strand, within MPMX19_04129 at 439.149 kb on + strand, within MPMX19_04129 at 439.149 kb on + strand, within MPMX19_04129 at 439.149 kb on + strand, within MPMX19_04129 at 439.150 kb on - strand, within MPMX19_04129 at 439.150 kb on - strand, within MPMX19_04129 at 439.150 kb on - strand, within MPMX19_04129 at 439.150 kb on - strand, within MPMX19_04129 at 439.150 kb on - strand, within MPMX19_04129 at 439.150 kb on - strand, within MPMX19_04129 at 439.150 kb on - strand, within MPMX19_04129 at 439.150 kb on - strand, within MPMX19_04129 at 439.150 kb on - strand, within MPMX19_04129 at 439.150 kb on - strand, within MPMX19_04129 at 439.150 kb on - strand, within MPMX19_04129 at 439.155 kb on + strand, within MPMX19_04129 at 439.155 kb on + strand, within MPMX19_04129 at 439.155 kb on + strand, within MPMX19_04129 at 439.155 kb on + strand, within MPMX19_04129 at 439.155 kb on + strand, within MPMX19_04129 at 439.155 kb on + strand, within MPMX19_04129 at 439.155 kb on + strand, within MPMX19_04129 at 439.155 kb on + strand, within MPMX19_04129 at 439.155 kb on + strand, within MPMX19_04129 at 439.155 kb on + strand, within MPMX19_04129 at 439.155 kb on + strand, within MPMX19_04129 at 439.156 kb on - strand, within MPMX19_04129 at 439.156 kb on - strand, within MPMX19_04129 at 439.156 kb on - strand, within MPMX19_04129 at 439.156 kb on - strand, within MPMX19_04129 at 439.156 kb on - strand, within MPMX19_04129 at 439.156 kb on - strand, within MPMX19_04129 at 439.470 kb on + strand, within MPMX19_04129 at 439.470 kb on + strand, within MPMX19_04129 at 439.470 kb on + strand, within MPMX19_04129 at 439.470 kb on + strand, within MPMX19_04129 at 439.471 kb on - strand, within MPMX19_04129 at 439.471 kb on - strand, within MPMX19_04129 at 439.471 kb on - strand, within MPMX19_04129 at 439.471 kb on - strand, within MPMX19_04129 at 439.471 kb on - strand, within MPMX19_04129 at 439.471 kb on - strand, within MPMX19_04129 at 439.497 kb on + strand, within MPMX19_04129 at 439.497 kb on + strand, within MPMX19_04129 at 439.497 kb on + strand, within MPMX19_04129 at 439.497 kb on + strand, within MPMX19_04129 at 439.497 kb on + strand, within MPMX19_04129 at 439.497 kb on + strand, within MPMX19_04129 at 439.497 kb on + strand, within MPMX19_04129 at 439.497 kb on + strand, within MPMX19_04129 at 439.498 kb on - strand, within MPMX19_04129 at 439.498 kb on - strand, within MPMX19_04129 at 439.498 kb on - strand, within MPMX19_04129 at 439.498 kb on - strand, within MPMX19_04129 at 439.498 kb on - strand, within MPMX19_04129 at 439.498 kb on - strand, within MPMX19_04129 at 439.498 kb on - strand, within MPMX19_04129 at 439.498 kb on - strand, within MPMX19_04129 at 439.498 kb on - strand, within MPMX19_04129
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 437,333 + MPMX19_04126 0.87 +0.3 437,817 + MPMX19_04127 0.75 -1.0 437,818 - MPMX19_04127 0.76 -1.7 437,818 - MPMX19_04127 0.76 -1.0 437,856 + MPMX19_04127 0.83 +0.8 437,856 + MPMX19_04127 0.83 +0.3 437,856 + MPMX19_04127 0.83 -0.4 437,856 + MPMX19_04127 0.83 -2.1 437,856 + MPMX19_04127 0.83 -0.4 437,856 + MPMX19_04127 0.83 -0.8 437,857 - MPMX19_04127 0.83 -1.3 437,857 - MPMX19_04127 0.83 -1.8 437,857 - MPMX19_04127 0.83 -0.8 437,857 - MPMX19_04127 0.83 -0.2 437,868 + MPMX19_04127 0.86 -2.5 437,868 + MPMX19_04127 0.86 -1.4 437,868 + MPMX19_04127 0.86 +0.6 437,868 + MPMX19_04127 0.86 -0.2 437,868 + MPMX19_04127 0.86 -1.0 437,868 + MPMX19_04127 0.86 +0.4 437,868 + MPMX19_04127 0.86 -0.8 437,869 - MPMX19_04127 0.86 +0.0 437,869 - MPMX19_04127 0.86 -0.3 437,869 - MPMX19_04127 0.86 +0.1 437,869 - MPMX19_04127 0.86 -0.7 437,869 - MPMX19_04127 0.86 -0.8 437,869 - MPMX19_04127 0.86 +0.6 437,869 - MPMX19_04127 0.86 -0.9 437,869 - MPMX19_04127 0.86 -1.1 437,869 - MPMX19_04127 0.86 -1.1 437,869 - MPMX19_04127 0.86 +0.3 437,896 + -0.2 437,896 + -0.7 437,896 + +0.2 437,897 - -0.4 438,158 + -0.8 438,158 + +0.2 438,158 + -1.1 438,158 + -1.2 438,158 + +0.2 438,158 + -0.4 438,158 + -0.0 438,158 + +0.2 438,158 + -0.0 438,158 + -2.0 438,158 + +0.5 438,159 - +0.1 438,159 - +0.3 438,159 - +1.0 438,159 - -0.2 438,159 - -1.8 438,159 - -2.2 438,159 - -1.0 438,159 - -0.7 438,159 - +1.5 438,159 - +0.5 438,298 - MPMX19_04128 0.16 -0.3 438,298 - MPMX19_04128 0.16 +0.3 438,298 - MPMX19_04128 0.16 -0.1 438,298 - MPMX19_04128 0.16 -0.1 438,373 + MPMX19_04128 0.29 +0.4 438,373 + MPMX19_04128 0.29 -0.7 438,373 + MPMX19_04128 0.29 +0.5 438,373 + MPMX19_04128 0.29 +0.8 438,373 + MPMX19_04128 0.29 -1.0 438,373 + MPMX19_04128 0.29 +0.4 438,374 - MPMX19_04128 0.29 -0.7 438,374 - MPMX19_04128 0.29 -0.7 438,374 - MPMX19_04128 0.29 -1.7 438,374 - MPMX19_04128 0.29 -0.5 438,374 - MPMX19_04128 0.29 +0.4 438,586 + MPMX19_04128 0.67 +0.2 438,700 + MPMX19_04128 0.87 +0.6 438,701 - MPMX19_04128 0.87 +0.3 438,786 + -1.0 438,786 + +2.8 438,786 + +1.2 438,786 + -0.3 438,786 + -0.8 438,786 + -0.7 438,786 + +0.3 438,787 - -1.0 438,787 - -0.9 438,787 - +0.2 438,787 - +1.0 438,787 - +0.5 438,787 - +0.2 438,787 - -2.0 439,026 + MPMX19_04129 0.25 -0.2 439,026 + MPMX19_04129 0.25 -0.8 439,027 - MPMX19_04129 0.25 -0.5 439,027 - MPMX19_04129 0.25 +0.2 439,027 - MPMX19_04129 0.25 +1.0 439,027 - MPMX19_04129 0.25 -0.0 439,050 + MPMX19_04129 0.28 -0.6 439,146 + MPMX19_04129 0.37 +0.8 439,146 + MPMX19_04129 0.37 -0.8 439,146 + MPMX19_04129 0.37 +0.3 439,146 + MPMX19_04129 0.37 -1.8 439,147 - MPMX19_04129 0.37 +0.2 439,147 - MPMX19_04129 0.37 -0.0 439,147 - MPMX19_04129 0.37 -0.8 439,147 - MPMX19_04129 0.37 +0.0 439,147 - MPMX19_04129 0.37 -1.4 439,147 - MPMX19_04129 0.37 +0.4 439,147 - MPMX19_04129 0.37 -0.2 439,147 - MPMX19_04129 0.37 -0.6 439,147 - MPMX19_04129 0.37 -0.4 439,149 + MPMX19_04129 0.37 -1.3 439,149 + MPMX19_04129 0.37 -0.4 439,149 + MPMX19_04129 0.37 -0.0 439,149 + MPMX19_04129 0.37 +1.6 439,149 + MPMX19_04129 0.37 -0.0 439,149 + MPMX19_04129 0.37 -0.3 439,149 + MPMX19_04129 0.37 -1.0 439,149 + MPMX19_04129 0.37 -0.9 439,149 + MPMX19_04129 0.37 -0.9 439,149 + MPMX19_04129 0.37 -0.7 439,149 + MPMX19_04129 0.37 -0.2 439,149 + MPMX19_04129 0.37 +1.1 439,149 + MPMX19_04129 0.37 +0.6 439,149 + MPMX19_04129 0.37 +0.6 439,149 + MPMX19_04129 0.37 +0.4 439,150 - MPMX19_04129 0.37 -0.9 439,150 - MPMX19_04129 0.37 +0.4 439,150 - MPMX19_04129 0.37 +0.3 439,150 - MPMX19_04129 0.37 -1.0 439,150 - MPMX19_04129 0.37 -0.8 439,150 - MPMX19_04129 0.37 -0.3 439,150 - MPMX19_04129 0.37 -0.5 439,150 - MPMX19_04129 0.37 -0.2 439,150 - MPMX19_04129 0.37 -1.1 439,150 - MPMX19_04129 0.37 +0.1 439,150 - MPMX19_04129 0.37 +0.2 439,155 + MPMX19_04129 0.38 -0.5 439,155 + MPMX19_04129 0.38 -0.8 439,155 + MPMX19_04129 0.38 +0.9 439,155 + MPMX19_04129 0.38 -1.1 439,155 + MPMX19_04129 0.38 -0.5 439,155 + MPMX19_04129 0.38 +0.2 439,155 + MPMX19_04129 0.38 -0.5 439,155 + MPMX19_04129 0.38 -0.6 439,155 + MPMX19_04129 0.38 -1.4 439,155 + MPMX19_04129 0.38 -0.4 439,155 + MPMX19_04129 0.38 +1.3 439,156 - MPMX19_04129 0.38 -1.2 439,156 - MPMX19_04129 0.38 -0.6 439,156 - MPMX19_04129 0.38 +1.0 439,156 - MPMX19_04129 0.38 -1.4 439,156 - MPMX19_04129 0.38 +0.8 439,156 - MPMX19_04129 0.38 -0.1 439,470 + MPMX19_04129 0.69 +0.4 439,470 + MPMX19_04129 0.69 -1.9 439,470 + MPMX19_04129 0.69 +0.1 439,470 + MPMX19_04129 0.69 +0.3 439,471 - MPMX19_04129 0.69 +0.4 439,471 - MPMX19_04129 0.69 -0.1 439,471 - MPMX19_04129 0.69 +1.4 439,471 - MPMX19_04129 0.69 +0.6 439,471 - MPMX19_04129 0.69 -0.4 439,471 - MPMX19_04129 0.69 +0.0 439,497 + MPMX19_04129 0.72 +1.0 439,497 + MPMX19_04129 0.72 -0.3 439,497 + MPMX19_04129 0.72 +0.4 439,497 + MPMX19_04129 0.72 -0.5 439,497 + MPMX19_04129 0.72 -0.3 439,497 + MPMX19_04129 0.72 -0.2 439,497 + MPMX19_04129 0.72 -0.5 439,497 + MPMX19_04129 0.72 +1.8 439,498 - MPMX19_04129 0.72 -0.4 439,498 - MPMX19_04129 0.72 -0.0 439,498 - MPMX19_04129 0.72 +0.8 439,498 - MPMX19_04129 0.72 -0.4 439,498 - MPMX19_04129 0.72 +0.3 439,498 - MPMX19_04129 0.72 -0.8 439,498 - MPMX19_04129 0.72 -1.5 439,498 - MPMX19_04129 0.72 +0.1 439,498 - MPMX19_04129 0.72 +0.1
Or see this region's nucleotide sequence