Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02172 and MPMX19_02173 are separated by 617 nucleotides MPMX19_02173 and MPMX19_02174 are separated by 490 nucleotides
MPMX19_02172: MPMX19_02172 - putative GTPase, at 2,273,178 to 2,274,188
_02172
MPMX19_02173: MPMX19_02173 - tRNA-Arg, at 2,274,806 to 2,274,900
_02173
MPMX19_02174: MPMX19_02174 - 50S ribosomal protein L28, at 2,275,391 to 2,275,690
_02174
Position (kb)
2274
2275 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2273.844 kb on + strand, within MPMX19_02172 at 2273.844 kb on + strand, within MPMX19_02172 at 2274.147 kb on - strand at 2274.147 kb on - strand at 2274.147 kb on - strand at 2274.201 kb on + strand at 2274.201 kb on + strand at 2274.201 kb on + strand at 2274.201 kb on + strand at 2274.201 kb on + strand at 2274.201 kb on + strand at 2274.201 kb on + strand at 2274.202 kb on - strand at 2274.202 kb on - strand at 2274.202 kb on - strand at 2274.202 kb on - strand at 2274.202 kb on - strand at 2274.202 kb on - strand at 2274.215 kb on + strand at 2274.215 kb on + strand at 2274.216 kb on - strand at 2274.256 kb on - strand at 2274.261 kb on + strand at 2274.261 kb on + strand at 2274.261 kb on + strand at 2274.261 kb on + strand at 2274.262 kb on - strand at 2274.262 kb on - strand at 2274.262 kb on - strand at 2274.389 kb on + strand at 2274.389 kb on + strand at 2274.389 kb on + strand at 2274.389 kb on + strand at 2274.389 kb on + strand at 2274.389 kb on + strand at 2274.389 kb on + strand at 2274.389 kb on + strand at 2274.389 kb on + strand at 2274.390 kb on - strand at 2274.390 kb on - strand at 2274.390 kb on - strand at 2274.390 kb on - strand at 2274.390 kb on - strand at 2274.390 kb on - strand at 2274.390 kb on - strand at 2274.390 kb on - strand at 2274.390 kb on - strand at 2274.390 kb on - strand at 2274.401 kb on + strand at 2274.401 kb on + strand at 2274.402 kb on - strand at 2275.237 kb on + strand at 2275.237 kb on + strand at 2275.237 kb on + strand at 2275.237 kb on + strand at 2275.238 kb on - strand at 2275.238 kb on - strand at 2275.371 kb on + strand at 2275.760 kb on + strand at 2275.760 kb on + strand at 2275.760 kb on + strand at 2275.769 kb on + strand at 2275.769 kb on + strand at 2275.878 kb on + strand at 2275.878 kb on + strand at 2275.878 kb on + strand at 2275.878 kb on + strand at 2275.878 kb on + strand at 2275.878 kb on + strand at 2275.878 kb on + strand at 2275.878 kb on + strand at 2275.878 kb on + strand at 2275.879 kb on - strand at 2275.879 kb on - strand at 2275.879 kb on - strand at 2275.879 kb on - strand at 2275.879 kb on - strand at 2275.879 kb on - strand at 2275.879 kb on - strand at 2275.879 kb on - strand at 2275.879 kb on - strand at 2275.879 kb on - strand at 2275.879 kb on - strand at 2275.879 kb on - strand at 2275.879 kb on - strand at 2275.879 kb on - strand at 2275.879 kb on - strand at 2275.879 kb on - strand at 2275.879 kb on - strand at 2275.879 kb on - strand at 2275.879 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 2,273,844 + MPMX19_02172 0.66 -0.9 2,273,844 + MPMX19_02172 0.66 -1.0 2,274,147 - -0.4 2,274,147 - +0.3 2,274,147 - -1.1 2,274,201 + -2.6 2,274,201 + -1.1 2,274,201 + +0.2 2,274,201 + +0.6 2,274,201 + +0.3 2,274,201 + -1.1 2,274,201 + -0.9 2,274,202 - +0.2 2,274,202 - +0.4 2,274,202 - +0.1 2,274,202 - +0.2 2,274,202 - -0.5 2,274,202 - +0.4 2,274,215 + -1.2 2,274,215 + -1.4 2,274,216 - -0.8 2,274,256 - -0.3 2,274,261 + +0.6 2,274,261 + -0.5 2,274,261 + +0.7 2,274,261 + -0.2 2,274,262 - -0.1 2,274,262 - -2.0 2,274,262 - -0.2 2,274,389 + -3.5 2,274,389 + -1.5 2,274,389 + -0.6 2,274,389 + -0.2 2,274,389 + -1.5 2,274,389 + +0.9 2,274,389 + -0.6 2,274,389 + +0.0 2,274,389 + +0.1 2,274,390 - -1.0 2,274,390 - -0.5 2,274,390 - -0.2 2,274,390 - +0.3 2,274,390 - -1.9 2,274,390 - +0.4 2,274,390 - -0.6 2,274,390 - +0.2 2,274,390 - +0.6 2,274,390 - -2.3 2,274,401 + -0.5 2,274,401 + -1.3 2,274,402 - -0.8 2,275,237 + +0.1 2,275,237 + -0.9 2,275,237 + -1.5 2,275,237 + -0.3 2,275,238 - -0.9 2,275,238 - +0.1 2,275,371 + +0.7 2,275,760 + +0.6 2,275,760 + +0.8 2,275,760 + -0.2 2,275,769 + +0.1 2,275,769 + -0.2 2,275,878 + -0.6 2,275,878 + -0.3 2,275,878 + +0.4 2,275,878 + +1.7 2,275,878 + +0.4 2,275,878 + +0.3 2,275,878 + +0.6 2,275,878 + -1.2 2,275,878 + -0.1 2,275,879 - -0.2 2,275,879 - -1.3 2,275,879 - +0.5 2,275,879 - -0.8 2,275,879 - +0.9 2,275,879 - +0.7 2,275,879 - -0.3 2,275,879 - -0.2 2,275,879 - -0.0 2,275,879 - -1.5 2,275,879 - +0.3 2,275,879 - +0.0 2,275,879 - -1.3 2,275,879 - +1.3 2,275,879 - +0.0 2,275,879 - -0.0 2,275,879 - +0.3 2,275,879 - -0.8 2,275,879 - -0.0
Or see this region's nucleotide sequence