Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01891 and MPMX19_01892 are separated by 147 nucleotides MPMX19_01892 and MPMX19_01893 are separated by 60 nucleotides MPMX19_01893 and MPMX19_01894 are separated by 264 nucleotides
MPMX19_01891: MPMX19_01891 - hypothetical protein, at 1,973,575 to 1,974,144
_01891
MPMX19_01892: MPMX19_01892 - hypothetical protein, at 1,974,292 to 1,974,516
_01892
MPMX19_01893: MPMX19_01893 - Glutamine-dependent NAD(+) synthetase, at 1,974,577 to 1,976,274
_01893
MPMX19_01894: MPMX19_01894 - hypothetical protein, at 1,976,539 to 1,977,522
_01894
Position (kb)
1974
1975
1976
1977 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1973.791 kb on + strand, within MPMX19_01891 at 1973.791 kb on + strand, within MPMX19_01891 at 1973.791 kb on + strand, within MPMX19_01891 at 1973.791 kb on + strand, within MPMX19_01891 at 1973.791 kb on + strand, within MPMX19_01891 at 1973.791 kb on + strand, within MPMX19_01891 at 1973.791 kb on + strand, within MPMX19_01891 at 1973.791 kb on + strand, within MPMX19_01891 at 1973.792 kb on - strand, within MPMX19_01891 at 1973.792 kb on - strand, within MPMX19_01891 at 1973.792 kb on - strand, within MPMX19_01891 at 1973.792 kb on - strand, within MPMX19_01891 at 1973.792 kb on - strand, within MPMX19_01891 at 1973.792 kb on - strand, within MPMX19_01891 at 1973.792 kb on - strand, within MPMX19_01891 at 1973.792 kb on - strand, within MPMX19_01891 at 1973.792 kb on - strand, within MPMX19_01891 at 1973.792 kb on - strand, within MPMX19_01891 at 1973.792 kb on - strand, within MPMX19_01891 at 1973.845 kb on + strand, within MPMX19_01891 at 1973.846 kb on - strand, within MPMX19_01891 at 1973.929 kb on + strand, within MPMX19_01891 at 1973.929 kb on + strand, within MPMX19_01891 at 1973.929 kb on + strand, within MPMX19_01891 at 1973.929 kb on + strand, within MPMX19_01891 at 1973.929 kb on + strand, within MPMX19_01891 at 1973.930 kb on - strand, within MPMX19_01891 at 1973.930 kb on - strand, within MPMX19_01891 at 1973.930 kb on - strand, within MPMX19_01891 at 1973.930 kb on - strand, within MPMX19_01891 at 1973.930 kb on - strand, within MPMX19_01891 at 1973.930 kb on - strand, within MPMX19_01891 at 1973.930 kb on - strand, within MPMX19_01891 at 1973.956 kb on + strand, within MPMX19_01891 at 1973.983 kb on + strand, within MPMX19_01891 at 1973.983 kb on + strand, within MPMX19_01891 at 1973.983 kb on + strand, within MPMX19_01891 at 1973.983 kb on + strand, within MPMX19_01891 at 1973.983 kb on + strand, within MPMX19_01891 at 1973.983 kb on + strand, within MPMX19_01891 at 1973.983 kb on + strand, within MPMX19_01891 at 1973.983 kb on + strand, within MPMX19_01891 at 1973.983 kb on + strand, within MPMX19_01891 at 1973.984 kb on - strand, within MPMX19_01891 at 1973.984 kb on - strand, within MPMX19_01891 at 1973.984 kb on - strand, within MPMX19_01891 at 1973.984 kb on - strand, within MPMX19_01891 at 1973.984 kb on - strand, within MPMX19_01891 at 1973.984 kb on - strand, within MPMX19_01891 at 1973.984 kb on - strand, within MPMX19_01891 at 1973.984 kb on - strand, within MPMX19_01891 at 1973.984 kb on - strand, within MPMX19_01891 at 1974.142 kb on + strand at 1974.143 kb on - strand at 1974.143 kb on - strand at 1974.227 kb on + strand at 1974.227 kb on + strand at 1974.227 kb on + strand at 1974.227 kb on + strand at 1974.228 kb on - strand at 1974.228 kb on - strand at 1974.228 kb on - strand at 1974.228 kb on - strand at 1974.228 kb on - strand at 1974.287 kb on + strand at 1974.310 kb on - strand at 1974.322 kb on + strand, within MPMX19_01892 at 1974.322 kb on + strand, within MPMX19_01892 at 1974.322 kb on + strand, within MPMX19_01892 at 1974.322 kb on + strand, within MPMX19_01892 at 1974.322 kb on + strand, within MPMX19_01892 at 1974.322 kb on + strand, within MPMX19_01892 at 1974.322 kb on + strand, within MPMX19_01892 at 1974.322 kb on + strand, within MPMX19_01892 at 1974.322 kb on + strand, within MPMX19_01892 at 1974.322 kb on + strand, within MPMX19_01892 at 1974.322 kb on + strand, within MPMX19_01892 at 1974.322 kb on + strand, within MPMX19_01892 at 1974.323 kb on - strand, within MPMX19_01892 at 1974.323 kb on - strand, within MPMX19_01892 at 1974.323 kb on - strand, within MPMX19_01892 at 1974.323 kb on - strand, within MPMX19_01892 at 1974.323 kb on - strand, within MPMX19_01892 at 1974.323 kb on - strand, within MPMX19_01892 at 1974.323 kb on - strand, within MPMX19_01892 at 1974.323 kb on - strand, within MPMX19_01892 at 1974.323 kb on - strand, within MPMX19_01892 at 1974.578 kb on + strand at 1974.578 kb on + strand at 1974.579 kb on - strand at 1974.579 kb on - strand at 1974.579 kb on - strand at 1974.579 kb on - strand at 1974.579 kb on - strand at 1974.579 kb on - strand at 1974.579 kb on - strand at 1974.579 kb on - strand at 1974.965 kb on + strand, within MPMX19_01893 at 1974.965 kb on + strand, within MPMX19_01893 at 1974.965 kb on + strand, within MPMX19_01893 at 1974.966 kb on - strand, within MPMX19_01893 at 1974.966 kb on - strand, within MPMX19_01893 at 1974.966 kb on - strand, within MPMX19_01893 at 1974.966 kb on - strand, within MPMX19_01893 at 1974.966 kb on - strand, within MPMX19_01893 at 1975.433 kb on + strand, within MPMX19_01893 at 1975.433 kb on + strand, within MPMX19_01893 at 1975.433 kb on + strand, within MPMX19_01893 at 1975.434 kb on - strand, within MPMX19_01893 at 1975.434 kb on - strand, within MPMX19_01893 at 1975.434 kb on - strand, within MPMX19_01893 at 1976.188 kb on + strand at 1976.188 kb on + strand at 1976.188 kb on + strand at 1976.254 kb on + strand at 1976.255 kb on - strand at 1976.255 kb on - strand at 1976.255 kb on - strand at 1976.255 kb on - strand at 1976.255 kb on - strand at 1976.316 kb on + strand at 1976.316 kb on + strand at 1976.316 kb on + strand at 1976.316 kb on + strand at 1976.316 kb on + strand at 1976.317 kb on - strand at 1976.391 kb on + strand at 1976.422 kb on + strand at 1976.423 kb on - strand at 1976.423 kb on - strand at 1976.425 kb on + strand at 1976.426 kb on - strand at 1976.426 kb on - strand at 1976.426 kb on - strand at 1976.445 kb on - strand at 1976.480 kb on + strand at 1976.542 kb on + strand at 1976.542 kb on + strand at 1976.542 kb on + strand at 1976.542 kb on + strand at 1976.542 kb on + strand at 1976.542 kb on + strand at 1976.542 kb on + strand at 1976.542 kb on + strand at 1976.542 kb on + strand at 1976.542 kb on + strand at 1976.542 kb on + strand at 1976.542 kb on + strand at 1976.542 kb on + strand at 1976.542 kb on + strand at 1976.542 kb on + strand at 1976.543 kb on - strand at 1976.543 kb on - strand at 1976.543 kb on - strand at 1976.543 kb on - strand at 1976.543 kb on - strand at 1976.543 kb on - strand at 1976.543 kb on - strand at 1976.543 kb on - strand at 1976.543 kb on - strand at 1976.543 kb on - strand at 1976.543 kb on - strand at 1976.543 kb on - strand at 1976.543 kb on - strand at 1976.543 kb on - strand at 1976.543 kb on - strand at 1976.543 kb on - strand at 1976.543 kb on - strand at 1976.545 kb on + strand at 1976.545 kb on + strand at 1976.545 kb on + strand at 1976.545 kb on + strand at 1976.545 kb on + strand at 1976.545 kb on + strand at 1976.545 kb on + strand at 1976.545 kb on + strand at 1976.545 kb on + strand at 1976.545 kb on + strand at 1976.546 kb on - strand at 1976.546 kb on - strand at 1976.546 kb on - strand at 1976.546 kb on - strand at 1976.667 kb on - strand, within MPMX19_01894 at 1976.667 kb on - strand, within MPMX19_01894 at 1976.707 kb on + strand, within MPMX19_01894 at 1976.707 kb on + strand, within MPMX19_01894 at 1976.707 kb on + strand, within MPMX19_01894 at 1976.707 kb on + strand, within MPMX19_01894 at 1976.707 kb on + strand, within MPMX19_01894 at 1976.707 kb on + strand, within MPMX19_01894 at 1976.707 kb on + strand, within MPMX19_01894 at 1976.707 kb on + strand, within MPMX19_01894 at 1976.707 kb on + strand, within MPMX19_01894 at 1976.707 kb on + strand, within MPMX19_01894 at 1976.707 kb on + strand, within MPMX19_01894 at 1976.707 kb on + strand, within MPMX19_01894 at 1976.707 kb on + strand, within MPMX19_01894 at 1976.707 kb on + strand, within MPMX19_01894 at 1976.707 kb on + strand, within MPMX19_01894 at 1976.708 kb on - strand, within MPMX19_01894 at 1976.708 kb on - strand, within MPMX19_01894 at 1976.708 kb on - strand, within MPMX19_01894 at 1976.708 kb on - strand, within MPMX19_01894 at 1976.708 kb on - strand, within MPMX19_01894 at 1976.708 kb on - strand, within MPMX19_01894 at 1976.708 kb on - strand, within MPMX19_01894 at 1976.708 kb on - strand, within MPMX19_01894 at 1976.708 kb on - strand, within MPMX19_01894 at 1976.708 kb on - strand, within MPMX19_01894 at 1976.708 kb on - strand, within MPMX19_01894
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 1,973,791 + MPMX19_01891 0.38 -0.9 1,973,791 + MPMX19_01891 0.38 -0.3 1,973,791 + MPMX19_01891 0.38 -0.3 1,973,791 + MPMX19_01891 0.38 -0.6 1,973,791 + MPMX19_01891 0.38 +1.4 1,973,791 + MPMX19_01891 0.38 +0.5 1,973,791 + MPMX19_01891 0.38 -0.1 1,973,791 + MPMX19_01891 0.38 -2.1 1,973,792 - MPMX19_01891 0.38 +0.3 1,973,792 - MPMX19_01891 0.38 -0.1 1,973,792 - MPMX19_01891 0.38 -2.6 1,973,792 - MPMX19_01891 0.38 -1.5 1,973,792 - MPMX19_01891 0.38 -0.7 1,973,792 - MPMX19_01891 0.38 -0.3 1,973,792 - MPMX19_01891 0.38 -1.3 1,973,792 - MPMX19_01891 0.38 +0.3 1,973,792 - MPMX19_01891 0.38 -1.5 1,973,792 - MPMX19_01891 0.38 -0.3 1,973,792 - MPMX19_01891 0.38 -1.5 1,973,845 + MPMX19_01891 0.47 +0.5 1,973,846 - MPMX19_01891 0.48 +1.8 1,973,929 + MPMX19_01891 0.62 -2.5 1,973,929 + MPMX19_01891 0.62 -0.7 1,973,929 + MPMX19_01891 0.62 -1.0 1,973,929 + MPMX19_01891 0.62 -0.5 1,973,929 + MPMX19_01891 0.62 -1.1 1,973,930 - MPMX19_01891 0.62 -0.4 1,973,930 - MPMX19_01891 0.62 +0.2 1,973,930 - MPMX19_01891 0.62 -1.0 1,973,930 - MPMX19_01891 0.62 -0.2 1,973,930 - MPMX19_01891 0.62 +0.6 1,973,930 - MPMX19_01891 0.62 -0.1 1,973,930 - MPMX19_01891 0.62 -1.2 1,973,956 + MPMX19_01891 0.67 +0.5 1,973,983 + MPMX19_01891 0.72 +0.6 1,973,983 + MPMX19_01891 0.72 -0.2 1,973,983 + MPMX19_01891 0.72 -0.5 1,973,983 + MPMX19_01891 0.72 -1.5 1,973,983 + MPMX19_01891 0.72 -0.5 1,973,983 + MPMX19_01891 0.72 +0.3 1,973,983 + MPMX19_01891 0.72 -0.1 1,973,983 + MPMX19_01891 0.72 +0.8 1,973,983 + MPMX19_01891 0.72 -0.4 1,973,984 - MPMX19_01891 0.72 +0.3 1,973,984 - MPMX19_01891 0.72 -1.5 1,973,984 - MPMX19_01891 0.72 -1.2 1,973,984 - MPMX19_01891 0.72 -0.5 1,973,984 - MPMX19_01891 0.72 -0.7 1,973,984 - MPMX19_01891 0.72 -0.4 1,973,984 - MPMX19_01891 0.72 +0.4 1,973,984 - MPMX19_01891 0.72 -0.5 1,973,984 - MPMX19_01891 0.72 -1.8 1,974,142 + -0.4 1,974,143 - -1.2 1,974,143 - -1.1 1,974,227 + +0.6 1,974,227 + -0.4 1,974,227 + +0.0 1,974,227 + +0.4 1,974,228 - -1.4 1,974,228 - +0.6 1,974,228 - -0.2 1,974,228 - -1.2 1,974,228 - -0.4 1,974,287 + +0.2 1,974,310 - -0.5 1,974,322 + MPMX19_01892 0.13 -0.5 1,974,322 + MPMX19_01892 0.13 +0.8 1,974,322 + MPMX19_01892 0.13 -1.9 1,974,322 + MPMX19_01892 0.13 +0.6 1,974,322 + MPMX19_01892 0.13 -1.2 1,974,322 + MPMX19_01892 0.13 +0.2 1,974,322 + MPMX19_01892 0.13 -0.2 1,974,322 + MPMX19_01892 0.13 -0.6 1,974,322 + MPMX19_01892 0.13 +0.8 1,974,322 + MPMX19_01892 0.13 -0.3 1,974,322 + MPMX19_01892 0.13 -0.5 1,974,322 + MPMX19_01892 0.13 -1.0 1,974,323 - MPMX19_01892 0.14 +0.5 1,974,323 - MPMX19_01892 0.14 -2.6 1,974,323 - MPMX19_01892 0.14 +0.2 1,974,323 - MPMX19_01892 0.14 -1.0 1,974,323 - MPMX19_01892 0.14 +0.1 1,974,323 - MPMX19_01892 0.14 -0.6 1,974,323 - MPMX19_01892 0.14 -2.1 1,974,323 - MPMX19_01892 0.14 -0.2 1,974,323 - MPMX19_01892 0.14 -0.5 1,974,578 + -0.1 1,974,578 + -0.2 1,974,579 - -0.4 1,974,579 - +0.2 1,974,579 - -1.0 1,974,579 - +1.5 1,974,579 - -1.0 1,974,579 - +1.0 1,974,579 - -0.4 1,974,579 - +0.3 1,974,965 + MPMX19_01893 0.23 +0.8 1,974,965 + MPMX19_01893 0.23 -1.2 1,974,965 + MPMX19_01893 0.23 +0.0 1,974,966 - MPMX19_01893 0.23 -0.6 1,974,966 - MPMX19_01893 0.23 +0.1 1,974,966 - MPMX19_01893 0.23 +1.1 1,974,966 - MPMX19_01893 0.23 +0.6 1,974,966 - MPMX19_01893 0.23 -0.1 1,975,433 + MPMX19_01893 0.50 -1.2 1,975,433 + MPMX19_01893 0.50 -0.3 1,975,433 + MPMX19_01893 0.50 +0.5 1,975,434 - MPMX19_01893 0.50 +0.3 1,975,434 - MPMX19_01893 0.50 -1.2 1,975,434 - MPMX19_01893 0.50 -0.7 1,976,188 + -0.5 1,976,188 + +0.9 1,976,188 + +0.8 1,976,254 + -0.2 1,976,255 - +0.4 1,976,255 - -0.5 1,976,255 - +0.5 1,976,255 - +0.5 1,976,255 - -1.2 1,976,316 + +0.2 1,976,316 + +0.5 1,976,316 + -0.5 1,976,316 + -1.1 1,976,316 + -1.3 1,976,317 - -0.4 1,976,391 + -1.3 1,976,422 + +0.3 1,976,423 - -0.2 1,976,423 - +0.2 1,976,425 + -0.4 1,976,426 - -1.0 1,976,426 - -0.8 1,976,426 - +0.4 1,976,445 - -1.0 1,976,480 + -0.9 1,976,542 + +1.8 1,976,542 + +0.5 1,976,542 + -0.2 1,976,542 + -0.8 1,976,542 + -0.8 1,976,542 + -0.4 1,976,542 + -0.1 1,976,542 + -0.0 1,976,542 + -0.1 1,976,542 + -0.1 1,976,542 + +0.0 1,976,542 + -0.0 1,976,542 + +0.5 1,976,542 + +0.2 1,976,542 + -0.9 1,976,543 - +0.6 1,976,543 - +1.2 1,976,543 - -0.4 1,976,543 - +0.2 1,976,543 - -0.2 1,976,543 - +0.2 1,976,543 - -0.7 1,976,543 - -0.8 1,976,543 - -0.2 1,976,543 - -0.9 1,976,543 - -0.4 1,976,543 - -1.3 1,976,543 - -0.5 1,976,543 - -1.0 1,976,543 - +0.6 1,976,543 - -0.2 1,976,543 - -1.7 1,976,545 + -1.6 1,976,545 + -0.0 1,976,545 + -0.6 1,976,545 + +0.0 1,976,545 + +0.5 1,976,545 + -0.5 1,976,545 + -0.1 1,976,545 + -0.5 1,976,545 + +0.9 1,976,545 + -0.8 1,976,546 - +0.2 1,976,546 - +0.2 1,976,546 - -0.4 1,976,546 - -0.3 1,976,667 - MPMX19_01894 0.13 -0.8 1,976,667 - MPMX19_01894 0.13 -0.7 1,976,707 + MPMX19_01894 0.17 -0.2 1,976,707 + MPMX19_01894 0.17 -0.0 1,976,707 + MPMX19_01894 0.17 -0.4 1,976,707 + MPMX19_01894 0.17 +0.9 1,976,707 + MPMX19_01894 0.17 +0.2 1,976,707 + MPMX19_01894 0.17 -1.9 1,976,707 + MPMX19_01894 0.17 -0.3 1,976,707 + MPMX19_01894 0.17 -0.1 1,976,707 + MPMX19_01894 0.17 -0.3 1,976,707 + MPMX19_01894 0.17 -0.8 1,976,707 + MPMX19_01894 0.17 +0.8 1,976,707 + MPMX19_01894 0.17 -0.5 1,976,707 + MPMX19_01894 0.17 +0.8 1,976,707 + MPMX19_01894 0.17 -0.7 1,976,707 + MPMX19_01894 0.17 -1.7 1,976,708 - MPMX19_01894 0.17 +0.2 1,976,708 - MPMX19_01894 0.17 -2.1 1,976,708 - MPMX19_01894 0.17 -1.7 1,976,708 - MPMX19_01894 0.17 +0.8 1,976,708 - MPMX19_01894 0.17 -0.8 1,976,708 - MPMX19_01894 0.17 +0.2 1,976,708 - MPMX19_01894 0.17 -0.3 1,976,708 - MPMX19_01894 0.17 +0.6 1,976,708 - MPMX19_01894 0.17 -0.4 1,976,708 - MPMX19_01894 0.17 +0.0 1,976,708 - MPMX19_01894 0.17 -0.9
Or see this region's nucleotide sequence