Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00763 and MPMX19_00764 are separated by 261 nucleotides MPMX19_00764 and MPMX19_00765 overlap by 1 nucleotides
MPMX19_00763: MPMX19_00763 - hypothetical protein, at 779,412 to 781,043
_00763
MPMX19_00764: MPMX19_00764 - ECF RNA polymerase sigma factor EcfG, at 781,305 to 781,814
_00764
MPMX19_00765: MPMX19_00765 - hypothetical protein, at 781,814 to 782,770
_00765
Position (kb) 781
782 Strain fitness (log2 ratio) -1
0
1
2 at 780.403 kb on - strand, within MPMX19_00763 at 780.403 kb on - strand, within MPMX19_00763 at 780.423 kb on + strand, within MPMX19_00763 at 780.424 kb on - strand, within MPMX19_00763 at 780.424 kb on - strand, within MPMX19_00763 at 780.501 kb on + strand, within MPMX19_00763 at 780.501 kb on + strand, within MPMX19_00763 at 780.501 kb on + strand, within MPMX19_00763 at 780.501 kb on + strand, within MPMX19_00763 at 780.501 kb on + strand, within MPMX19_00763 at 780.501 kb on + strand, within MPMX19_00763 at 780.501 kb on + strand, within MPMX19_00763 at 780.502 kb on - strand, within MPMX19_00763 at 780.502 kb on - strand, within MPMX19_00763 at 780.502 kb on - strand, within MPMX19_00763 at 780.502 kb on - strand, within MPMX19_00763 at 780.502 kb on - strand, within MPMX19_00763 at 780.502 kb on - strand, within MPMX19_00763 at 780.502 kb on - strand, within MPMX19_00763 at 780.925 kb on - strand at 780.943 kb on - strand at 780.943 kb on - strand at 781.111 kb on + strand at 781.111 kb on + strand at 781.111 kb on + strand at 781.111 kb on + strand at 781.111 kb on + strand at 781.111 kb on + strand at 781.111 kb on + strand at 781.112 kb on - strand at 781.112 kb on - strand at 781.112 kb on - strand at 781.112 kb on - strand at 781.112 kb on - strand at 781.112 kb on - strand at 781.112 kb on - strand at 781.123 kb on + strand at 781.123 kb on + strand at 781.124 kb on - strand at 781.124 kb on - strand at 781.124 kb on - strand at 781.124 kb on - strand at 781.124 kb on - strand at 781.153 kb on + strand at 781.153 kb on + strand at 781.153 kb on + strand at 781.153 kb on + strand at 781.153 kb on + strand at 781.153 kb on + strand at 781.153 kb on + strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.288 kb on - strand at 781.686 kb on + strand, within MPMX19_00764 at 781.686 kb on + strand, within MPMX19_00764 at 781.686 kb on + strand, within MPMX19_00764 at 781.687 kb on - strand, within MPMX19_00764 at 781.687 kb on - strand, within MPMX19_00764 at 781.687 kb on - strand, within MPMX19_00764 at 781.687 kb on - strand, within MPMX19_00764 at 781.793 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 780,403 - MPMX19_00763 0.61 -0.5 780,403 - MPMX19_00763 0.61 -0.5 780,423 + MPMX19_00763 0.62 -0.7 780,424 - MPMX19_00763 0.62 -0.3 780,424 - MPMX19_00763 0.62 -0.5 780,501 + MPMX19_00763 0.67 -0.9 780,501 + MPMX19_00763 0.67 -0.6 780,501 + MPMX19_00763 0.67 -0.9 780,501 + MPMX19_00763 0.67 -0.7 780,501 + MPMX19_00763 0.67 -0.0 780,501 + MPMX19_00763 0.67 +0.8 780,501 + MPMX19_00763 0.67 +0.0 780,502 - MPMX19_00763 0.67 +1.1 780,502 - MPMX19_00763 0.67 +0.0 780,502 - MPMX19_00763 0.67 -0.0 780,502 - MPMX19_00763 0.67 +1.5 780,502 - MPMX19_00763 0.67 -0.4 780,502 - MPMX19_00763 0.67 -0.1 780,502 - MPMX19_00763 0.67 +0.3 780,925 - -0.2 780,943 - -1.2 780,943 - -0.5 781,111 + -0.7 781,111 + +0.4 781,111 + +0.7 781,111 + -0.9 781,111 + +0.0 781,111 + -0.4 781,111 + -0.4 781,112 - +1.1 781,112 - -1.3 781,112 - +0.8 781,112 - -0.1 781,112 - -0.6 781,112 - +0.1 781,112 - +0.0 781,123 + +1.4 781,123 + -1.6 781,124 - +0.0 781,124 - -1.6 781,124 - +0.0 781,124 - -1.2 781,124 - +1.8 781,153 + -0.2 781,153 + +0.0 781,153 + +0.8 781,153 + +1.6 781,153 + +0.5 781,153 + -0.4 781,153 + +0.5 781,154 - -0.7 781,154 - -1.2 781,154 - -1.7 781,154 - +1.3 781,154 - +0.8 781,154 - -0.7 781,154 - +0.0 781,154 - -0.8 781,154 - -1.7 781,154 - -1.6 781,154 - +0.1 781,288 - +1.0 781,686 + MPMX19_00764 0.75 -1.1 781,686 + MPMX19_00764 0.75 +0.1 781,686 + MPMX19_00764 0.75 +1.0 781,687 - MPMX19_00764 0.75 +0.4 781,687 - MPMX19_00764 0.75 +0.8 781,687 - MPMX19_00764 0.75 -0.1 781,687 - MPMX19_00764 0.75 +0.8 781,793 + -0.5
Or see this region's nucleotide sequence