Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00632

Experiment: NLN

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00631 and MPMX19_00632 are separated by 66 nucleotidesMPMX19_00632 and MPMX19_00633 are separated by 196 nucleotides MPMX19_00631: MPMX19_00631 - putative MFS-type transporter, at 648,599 to 649,861 _00631 MPMX19_00632: MPMX19_00632 - Intermembrane phospholipid transport system binding protein MlaC, at 649,928 to 650,557 _00632 MPMX19_00633: MPMX19_00633 - Intermembrane phospholipid transport system lipoprotein MlaA, at 650,754 to 651,539 _00633 Position (kb) 649 650 651Strain fitness (log2 ratio) -2 -1 0 1 2at 649.058 kb on + strand, within MPMX19_00631at 649.058 kb on + strand, within MPMX19_00631at 649.058 kb on + strand, within MPMX19_00631at 649.058 kb on + strand, within MPMX19_00631at 649.058 kb on + strand, within MPMX19_00631at 649.058 kb on + strand, within MPMX19_00631at 649.058 kb on + strand, within MPMX19_00631at 649.058 kb on + strand, within MPMX19_00631at 649.058 kb on + strand, within MPMX19_00631at 649.059 kb on - strand, within MPMX19_00631at 649.059 kb on - strand, within MPMX19_00631at 649.059 kb on - strand, within MPMX19_00631at 649.490 kb on + strand, within MPMX19_00631at 649.490 kb on + strand, within MPMX19_00631at 649.490 kb on + strand, within MPMX19_00631at 649.490 kb on + strand, within MPMX19_00631at 649.490 kb on + strand, within MPMX19_00631at 649.490 kb on + strand, within MPMX19_00631at 649.490 kb on + strand, within MPMX19_00631at 649.490 kb on + strand, within MPMX19_00631at 649.490 kb on + strand, within MPMX19_00631at 649.490 kb on + strand, within MPMX19_00631at 649.490 kb on + strand, within MPMX19_00631at 649.490 kb on + strand, within MPMX19_00631at 649.490 kb on + strand, within MPMX19_00631at 649.490 kb on + strand, within MPMX19_00631at 649.490 kb on + strand, within MPMX19_00631at 649.490 kb on + strand, within MPMX19_00631at 649.490 kb on + strand, within MPMX19_00631at 649.491 kb on - strand, within MPMX19_00631at 649.491 kb on - strand, within MPMX19_00631at 649.491 kb on - strand, within MPMX19_00631at 649.491 kb on - strand, within MPMX19_00631at 649.491 kb on - strand, within MPMX19_00631at 649.491 kb on - strand, within MPMX19_00631at 649.491 kb on - strand, within MPMX19_00631at 649.491 kb on - strand, within MPMX19_00631at 649.491 kb on - strand, within MPMX19_00631at 649.491 kb on - strand, within MPMX19_00631at 649.491 kb on - strand, within MPMX19_00631at 649.491 kb on - strand, within MPMX19_00631at 649.491 kb on - strand, within MPMX19_00631at 649.706 kb on + strand, within MPMX19_00631at 649.706 kb on + strand, within MPMX19_00631at 649.706 kb on + strand, within MPMX19_00631at 649.706 kb on + strand, within MPMX19_00631at 649.706 kb on + strand, within MPMX19_00631at 649.706 kb on + strand, within MPMX19_00631at 649.707 kb on - strand, within MPMX19_00631at 649.707 kb on - strand, within MPMX19_00631at 649.707 kb on - strand, within MPMX19_00631at 649.903 kb on + strandat 650.226 kb on + strand, within MPMX19_00632at 650.226 kb on + strand, within MPMX19_00632at 650.226 kb on + strand, within MPMX19_00632at 650.226 kb on + strand, within MPMX19_00632at 650.227 kb on - strand, within MPMX19_00632at 650.227 kb on - strand, within MPMX19_00632at 650.227 kb on - strand, within MPMX19_00632at 650.262 kb on + strand, within MPMX19_00632at 650.325 kb on + strand, within MPMX19_00632at 650.325 kb on + strand, within MPMX19_00632at 650.325 kb on + strand, within MPMX19_00632at 650.325 kb on + strand, within MPMX19_00632at 650.325 kb on + strand, within MPMX19_00632at 650.325 kb on + strand, within MPMX19_00632at 650.326 kb on - strand, within MPMX19_00632at 650.326 kb on - strand, within MPMX19_00632at 650.346 kb on + strand, within MPMX19_00632at 650.347 kb on - strand, within MPMX19_00632at 650.347 kb on - strand, within MPMX19_00632at 650.723 kb on + strandat 650.723 kb on + strandat 650.723 kb on + strandat 650.723 kb on + strandat 650.724 kb on - strandat 650.724 kb on - strandat 650.724 kb on - strandat 650.724 kb on - strandat 650.724 kb on - strandat 650.724 kb on - strandat 650.799 kb on - strandat 650.799 kb on - strandat 650.843 kb on - strand, within MPMX19_00633at 650.863 kb on + strand, within MPMX19_00633at 650.950 kb on + strand, within MPMX19_00633at 650.950 kb on + strand, within MPMX19_00633at 650.950 kb on + strand, within MPMX19_00633at 650.950 kb on + strand, within MPMX19_00633at 650.950 kb on + strand, within MPMX19_00633at 650.951 kb on - strand, within MPMX19_00633at 650.951 kb on - strand, within MPMX19_00633at 650.951 kb on - strand, within MPMX19_00633at 650.978 kb on - strand, within MPMX19_00633at 650.978 kb on - strand, within MPMX19_00633at 651.070 kb on + strand, within MPMX19_00633at 651.071 kb on - strand, within MPMX19_00633at 651.253 kb on + strand, within MPMX19_00633at 651.253 kb on + strand, within MPMX19_00633at 651.253 kb on + strand, within MPMX19_00633at 651.254 kb on - strand, within MPMX19_00633at 651.254 kb on - strand, within MPMX19_00633at 651.254 kb on - strand, within MPMX19_00633at 651.254 kb on - strand, within MPMX19_00633at 651.254 kb on - strand, within MPMX19_00633at 651.325 kb on + strand, within MPMX19_00633at 651.325 kb on + strand, within MPMX19_00633at 651.325 kb on + strand, within MPMX19_00633at 651.325 kb on + strand, within MPMX19_00633at 651.325 kb on + strand, within MPMX19_00633at 651.325 kb on + strand, within MPMX19_00633at 651.325 kb on + strand, within MPMX19_00633at 651.326 kb on - strand, within MPMX19_00633at 651.326 kb on - strand, within MPMX19_00633at 651.326 kb on - strand, within MPMX19_00633at 651.326 kb on - strand, within MPMX19_00633at 651.326 kb on - strand, within MPMX19_00633at 651.326 kb on - strand, within MPMX19_00633at 651.326 kb on - strand, within MPMX19_00633at 651.326 kb on - strand, within MPMX19_00633at 651.326 kb on - strand, within MPMX19_00633at 651.360 kb on + strand, within MPMX19_00633at 651.361 kb on - strand, within MPMX19_00633at 651.421 kb on + strand, within MPMX19_00633at 651.554 kb on + strandat 651.554 kb on + strandat 651.554 kb on + strandat 651.554 kb on + strandat 651.554 kb on + strandat 651.554 kb on + strandat 651.555 kb on - strandat 651.555 kb on - strandat 651.555 kb on - strandat 651.555 kb on - strandat 651.555 kb on - strandat 651.555 kb on - strandat 651.555 kb on - strandat 651.555 kb on - strandat 651.555 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NLN
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649,058 + MPMX19_00631 0.36 -1.5
649,058 + MPMX19_00631 0.36 -1.9
649,058 + MPMX19_00631 0.36 -0.4
649,058 + MPMX19_00631 0.36 -0.6
649,058 + MPMX19_00631 0.36 -0.1
649,058 + MPMX19_00631 0.36 -1.1
649,058 + MPMX19_00631 0.36 +0.4
649,058 + MPMX19_00631 0.36 +1.8
649,058 + MPMX19_00631 0.36 +0.8
649,059 - MPMX19_00631 0.36 +0.4
649,059 - MPMX19_00631 0.36 +0.2
649,059 - MPMX19_00631 0.36 +0.0
649,490 + MPMX19_00631 0.71 -1.4
649,490 + MPMX19_00631 0.71 -0.3
649,490 + MPMX19_00631 0.71 -0.8
649,490 + MPMX19_00631 0.71 +0.6
649,490 + MPMX19_00631 0.71 -0.3
649,490 + MPMX19_00631 0.71 -0.5
649,490 + MPMX19_00631 0.71 +0.2
649,490 + MPMX19_00631 0.71 +0.4
649,490 + MPMX19_00631 0.71 +0.2
649,490 + MPMX19_00631 0.71 -0.5
649,490 + MPMX19_00631 0.71 -0.1
649,490 + MPMX19_00631 0.71 -1.9
649,490 + MPMX19_00631 0.71 -0.3
649,490 + MPMX19_00631 0.71 -0.1
649,490 + MPMX19_00631 0.71 -0.5
649,490 + MPMX19_00631 0.71 -0.9
649,490 + MPMX19_00631 0.71 -2.0
649,491 - MPMX19_00631 0.71 -0.3
649,491 - MPMX19_00631 0.71 -0.7
649,491 - MPMX19_00631 0.71 -0.7
649,491 - MPMX19_00631 0.71 +1.4
649,491 - MPMX19_00631 0.71 -0.2
649,491 - MPMX19_00631 0.71 -0.3
649,491 - MPMX19_00631 0.71 -0.5
649,491 - MPMX19_00631 0.71 +1.4
649,491 - MPMX19_00631 0.71 +0.4
649,491 - MPMX19_00631 0.71 -0.5
649,491 - MPMX19_00631 0.71 +0.2
649,491 - MPMX19_00631 0.71 -0.8
649,491 - MPMX19_00631 0.71 -0.4
649,706 + MPMX19_00631 0.88 +0.8
649,706 + MPMX19_00631 0.88 -0.3
649,706 + MPMX19_00631 0.88 +0.2
649,706 + MPMX19_00631 0.88 +0.0
649,706 + MPMX19_00631 0.88 -2.4
649,706 + MPMX19_00631 0.88 -0.1
649,707 - MPMX19_00631 0.88 -0.5
649,707 - MPMX19_00631 0.88 +0.4
649,707 - MPMX19_00631 0.88 -0.2
649,903 + +0.8
650,226 + MPMX19_00632 0.47 -1.9
650,226 + MPMX19_00632 0.47 -1.2
650,226 + MPMX19_00632 0.47 -1.2
650,226 + MPMX19_00632 0.47 -1.2
650,227 - MPMX19_00632 0.47 -0.4
650,227 - MPMX19_00632 0.47 -1.5
650,227 - MPMX19_00632 0.47 +0.6
650,262 + MPMX19_00632 0.53 -1.9
650,325 + MPMX19_00632 0.63 -1.1
650,325 + MPMX19_00632 0.63 -1.1
650,325 + MPMX19_00632 0.63 -0.2
650,325 + MPMX19_00632 0.63 +0.4
650,325 + MPMX19_00632 0.63 -2.4
650,325 + MPMX19_00632 0.63 -0.9
650,326 - MPMX19_00632 0.63 +0.0
650,326 - MPMX19_00632 0.63 -0.6
650,346 + MPMX19_00632 0.66 -1.9
650,347 - MPMX19_00632 0.67 -1.0
650,347 - MPMX19_00632 0.67 +0.1
650,723 + -0.8
650,723 + -1.3
650,723 + +0.0
650,723 + -0.9
650,724 - +0.4
650,724 - -1.4
650,724 - +0.2
650,724 - -2.0
650,724 - -2.4
650,724 - +0.4
650,799 - +0.0
650,799 - -0.8
650,843 - MPMX19_00633 0.11 -0.9
650,863 + MPMX19_00633 0.14 -0.2
650,950 + MPMX19_00633 0.25 -1.8
650,950 + MPMX19_00633 0.25 +1.4
650,950 + MPMX19_00633 0.25 -1.2
650,950 + MPMX19_00633 0.25 -2.1
650,950 + MPMX19_00633 0.25 -0.9
650,951 - MPMX19_00633 0.25 -0.9
650,951 - MPMX19_00633 0.25 -0.1
650,951 - MPMX19_00633 0.25 -1.8
650,978 - MPMX19_00633 0.28 -0.2
650,978 - MPMX19_00633 0.28 -2.5
651,070 + MPMX19_00633 0.40 -0.9
651,071 - MPMX19_00633 0.40 -1.3
651,253 + MPMX19_00633 0.63 -0.8
651,253 + MPMX19_00633 0.63 -1.8
651,253 + MPMX19_00633 0.63 -1.1
651,254 - MPMX19_00633 0.64 -1.6
651,254 - MPMX19_00633 0.64 -0.1
651,254 - MPMX19_00633 0.64 -1.3
651,254 - MPMX19_00633 0.64 -1.6
651,254 - MPMX19_00633 0.64 -2.1
651,325 + MPMX19_00633 0.73 -0.8
651,325 + MPMX19_00633 0.73 -0.5
651,325 + MPMX19_00633 0.73 -2.0
651,325 + MPMX19_00633 0.73 -1.1
651,325 + MPMX19_00633 0.73 -0.5
651,325 + MPMX19_00633 0.73 -0.5
651,325 + MPMX19_00633 0.73 +0.2
651,326 - MPMX19_00633 0.73 -1.5
651,326 - MPMX19_00633 0.73 -1.3
651,326 - MPMX19_00633 0.73 -0.8
651,326 - MPMX19_00633 0.73 -0.6
651,326 - MPMX19_00633 0.73 -1.8
651,326 - MPMX19_00633 0.73 -1.2
651,326 - MPMX19_00633 0.73 -1.9
651,326 - MPMX19_00633 0.73 -0.5
651,326 - MPMX19_00633 0.73 -0.2
651,360 + MPMX19_00633 0.77 -1.3
651,361 - MPMX19_00633 0.77 -1.3
651,421 + MPMX19_00633 0.85 -1.8
651,554 + -1.0
651,554 + -2.0
651,554 + -0.6
651,554 + -1.3
651,554 + -1.6
651,554 + -1.4
651,555 - -0.5
651,555 - -0.4
651,555 - -0.7
651,555 - +0.0
651,555 - -0.8
651,555 - -0.5
651,555 - +0.9
651,555 - +0.0
651,555 - -0.3

Or see this region's nucleotide sequence