Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00542 and MPMX19_00543 overlap by 11 nucleotides MPMX19_00543 and MPMX19_00544 overlap by 4 nucleotides MPMX19_00544 and MPMX19_00545 overlap by 4 nucleotides MPMX19_00545 and MPMX19_00546 are separated by 452 nucleotides
MPMX19_00542: MPMX19_00542 - Sulfur carrier protein FdhD, at 557,888 to 558,769
_00542
MPMX19_00543: MPMX19_00543 - Molybdenum cofactor guanylyltransferase, at 558,759 to 559,397
_00543
MPMX19_00544: MPMX19_00544 - hypothetical protein, at 559,394 to 559,903
_00544
MPMX19_00545: MPMX19_00545 - hypothetical protein, at 559,900 to 560,430
_00545
MPMX19_00546: MPMX19_00546 - Chaperone protein TorD, at 560,883 to 561,509
_00546
Position (kb) 559
560 Strain fitness (log2 ratio) -2
-1
0
1
2 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.419 kb on + strand, within MPMX19_00542 at 558.420 kb on - strand, within MPMX19_00542 at 558.420 kb on - strand, within MPMX19_00542 at 558.420 kb on - strand, within MPMX19_00542 at 558.420 kb on - strand, within MPMX19_00542 at 558.420 kb on - strand, within MPMX19_00542 at 558.420 kb on - strand, within MPMX19_00542 at 558.420 kb on - strand, within MPMX19_00542 at 558.420 kb on - strand, within MPMX19_00542 at 558.420 kb on - strand, within MPMX19_00542 at 558.420 kb on - strand, within MPMX19_00542 at 558.420 kb on - strand, within MPMX19_00542 at 558.420 kb on - strand, within MPMX19_00542 at 558.420 kb on - strand, within MPMX19_00542 at 558.420 kb on - strand, within MPMX19_00542 at 558.420 kb on - strand, within MPMX19_00542 at 558.420 kb on - strand, within MPMX19_00542 at 558.420 kb on - strand, within MPMX19_00542 at 558.467 kb on + strand, within MPMX19_00542 at 558.467 kb on + strand, within MPMX19_00542 at 558.467 kb on + strand, within MPMX19_00542 at 558.467 kb on + strand, within MPMX19_00542 at 558.467 kb on + strand, within MPMX19_00542 at 558.468 kb on - strand, within MPMX19_00542 at 558.468 kb on - strand, within MPMX19_00542 at 558.468 kb on - strand, within MPMX19_00542 at 558.468 kb on - strand, within MPMX19_00542 at 558.468 kb on - strand, within MPMX19_00542 at 558.468 kb on - strand, within MPMX19_00542 at 558.468 kb on - strand, within MPMX19_00542 at 558.468 kb on - strand, within MPMX19_00542 at 558.468 kb on - strand, within MPMX19_00542 at 558.468 kb on - strand, within MPMX19_00542 at 558.468 kb on - strand, within MPMX19_00542 at 558.509 kb on + strand, within MPMX19_00542 at 558.509 kb on + strand, within MPMX19_00542 at 558.510 kb on - strand, within MPMX19_00542 at 558.510 kb on - strand, within MPMX19_00542 at 558.510 kb on - strand, within MPMX19_00542 at 558.626 kb on - strand, within MPMX19_00542 at 558.626 kb on - strand, within MPMX19_00542 at 558.767 kb on + strand at 558.767 kb on + strand at 558.767 kb on + strand at 558.767 kb on + strand at 558.767 kb on + strand at 558.767 kb on + strand at 558.767 kb on + strand at 558.767 kb on + strand at 558.767 kb on + strand at 558.768 kb on - strand at 558.768 kb on - strand at 558.768 kb on - strand at 558.768 kb on - strand at 558.768 kb on - strand at 558.768 kb on - strand at 558.768 kb on - strand at 558.993 kb on + strand, within MPMX19_00543 at 558.993 kb on + strand, within MPMX19_00543 at 558.993 kb on + strand, within MPMX19_00543 at 558.993 kb on + strand, within MPMX19_00543 at 558.994 kb on - strand, within MPMX19_00543 at 558.994 kb on - strand, within MPMX19_00543 at 558.994 kb on - strand, within MPMX19_00543 at 559.205 kb on + strand, within MPMX19_00543 at 559.635 kb on - strand, within MPMX19_00544 at 559.635 kb on - strand, within MPMX19_00544 at 559.751 kb on + strand, within MPMX19_00544 at 559.752 kb on - strand, within MPMX19_00544 at 559.752 kb on - strand, within MPMX19_00544 at 560.215 kb on + strand, within MPMX19_00545 at 560.215 kb on + strand, within MPMX19_00545 at 560.215 kb on + strand, within MPMX19_00545 at 560.215 kb on + strand, within MPMX19_00545 at 560.215 kb on + strand, within MPMX19_00545 at 560.215 kb on + strand, within MPMX19_00545 at 560.216 kb on - strand, within MPMX19_00545 at 560.216 kb on - strand, within MPMX19_00545 at 560.216 kb on - strand, within MPMX19_00545 at 560.242 kb on + strand, within MPMX19_00545 at 560.242 kb on + strand, within MPMX19_00545 at 560.242 kb on + strand, within MPMX19_00545 at 560.242 kb on + strand, within MPMX19_00545 at 560.242 kb on + strand, within MPMX19_00545 at 560.242 kb on + strand, within MPMX19_00545 at 560.242 kb on + strand, within MPMX19_00545 at 560.243 kb on - strand, within MPMX19_00545 at 560.243 kb on - strand, within MPMX19_00545 at 560.243 kb on - strand, within MPMX19_00545 at 560.243 kb on - strand, within MPMX19_00545 at 560.243 kb on - strand, within MPMX19_00545 at 560.254 kb on + strand, within MPMX19_00545 at 560.254 kb on + strand, within MPMX19_00545 at 560.254 kb on + strand, within MPMX19_00545 at 560.254 kb on + strand, within MPMX19_00545 at 560.254 kb on + strand, within MPMX19_00545 at 560.255 kb on - strand, within MPMX19_00545 at 560.255 kb on - strand, within MPMX19_00545 at 560.255 kb on - strand, within MPMX19_00545 at 560.296 kb on + strand, within MPMX19_00545 at 560.297 kb on - strand, within MPMX19_00545 at 560.297 kb on - strand, within MPMX19_00545 at 560.428 kb on + strand at 560.429 kb on - strand at 560.429 kb on - strand at 560.455 kb on + strand at 560.455 kb on + strand at 560.455 kb on + strand at 560.455 kb on + strand at 560.455 kb on + strand at 560.455 kb on + strand at 560.455 kb on + strand at 560.455 kb on + strand at 560.455 kb on + strand at 560.455 kb on + strand at 560.455 kb on + strand at 560.455 kb on + strand at 560.455 kb on + strand at 560.455 kb on + strand at 560.455 kb on + strand at 560.455 kb on + strand at 560.456 kb on - strand at 560.456 kb on - strand at 560.456 kb on - strand at 560.456 kb on - strand at 560.456 kb on - strand at 560.456 kb on - strand at 560.456 kb on - strand at 560.456 kb on - strand at 560.456 kb on - strand at 560.456 kb on - strand at 560.456 kb on - strand at 560.456 kb on - strand at 560.653 kb on + strand at 560.653 kb on + strand at 560.653 kb on + strand at 560.653 kb on + strand at 560.654 kb on - strand at 560.654 kb on - strand at 560.716 kb on - strand at 560.716 kb on - strand at 560.716 kb on - strand at 560.730 kb on + strand at 560.730 kb on + strand at 560.730 kb on + strand at 560.730 kb on + strand at 560.730 kb on + strand at 560.730 kb on + strand at 560.730 kb on + strand at 560.730 kb on + strand at 560.730 kb on + strand at 560.730 kb on + strand at 560.731 kb on - strand at 560.731 kb on - strand at 560.731 kb on - strand at 560.731 kb on - strand at 560.731 kb on - strand at 560.731 kb on - strand at 560.731 kb on - strand at 560.731 kb on - strand at 560.903 kb on + strand at 560.903 kb on + strand at 560.903 kb on + strand at 560.903 kb on + strand at 560.903 kb on + strand at 560.903 kb on + strand at 560.903 kb on + strand at 560.903 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 558,419 + MPMX19_00542 0.60 +0.2 558,419 + MPMX19_00542 0.60 -0.2 558,419 + MPMX19_00542 0.60 -1.4 558,419 + MPMX19_00542 0.60 -0.1 558,419 + MPMX19_00542 0.60 +1.0 558,419 + MPMX19_00542 0.60 -0.7 558,419 + MPMX19_00542 0.60 -0.0 558,419 + MPMX19_00542 0.60 -0.8 558,419 + MPMX19_00542 0.60 +0.5 558,419 + MPMX19_00542 0.60 +0.5 558,419 + MPMX19_00542 0.60 +0.1 558,419 + MPMX19_00542 0.60 -0.3 558,419 + MPMX19_00542 0.60 +0.8 558,419 + MPMX19_00542 0.60 -0.5 558,419 + MPMX19_00542 0.60 +0.1 558,419 + MPMX19_00542 0.60 -0.9 558,419 + MPMX19_00542 0.60 +0.1 558,419 + MPMX19_00542 0.60 -0.4 558,419 + MPMX19_00542 0.60 -0.2 558,419 + MPMX19_00542 0.60 +0.6 558,419 + MPMX19_00542 0.60 +1.2 558,420 - MPMX19_00542 0.60 -1.4 558,420 - MPMX19_00542 0.60 -0.1 558,420 - MPMX19_00542 0.60 -0.8 558,420 - MPMX19_00542 0.60 -0.0 558,420 - MPMX19_00542 0.60 -1.7 558,420 - MPMX19_00542 0.60 -0.8 558,420 - MPMX19_00542 0.60 +0.2 558,420 - MPMX19_00542 0.60 +1.0 558,420 - MPMX19_00542 0.60 +0.3 558,420 - MPMX19_00542 0.60 -0.7 558,420 - MPMX19_00542 0.60 -0.6 558,420 - MPMX19_00542 0.60 -0.2 558,420 - MPMX19_00542 0.60 -0.2 558,420 - MPMX19_00542 0.60 +0.2 558,420 - MPMX19_00542 0.60 -0.5 558,420 - MPMX19_00542 0.60 -0.8 558,420 - MPMX19_00542 0.60 +0.3 558,467 + MPMX19_00542 0.66 -0.1 558,467 + MPMX19_00542 0.66 +0.6 558,467 + MPMX19_00542 0.66 -0.8 558,467 + MPMX19_00542 0.66 -1.5 558,467 + MPMX19_00542 0.66 +1.8 558,468 - MPMX19_00542 0.66 -0.4 558,468 - MPMX19_00542 0.66 +0.4 558,468 - MPMX19_00542 0.66 -0.4 558,468 - MPMX19_00542 0.66 +1.3 558,468 - MPMX19_00542 0.66 -0.8 558,468 - MPMX19_00542 0.66 -0.8 558,468 - MPMX19_00542 0.66 +1.1 558,468 - MPMX19_00542 0.66 -0.1 558,468 - MPMX19_00542 0.66 -0.6 558,468 - MPMX19_00542 0.66 +0.2 558,468 - MPMX19_00542 0.66 -0.9 558,509 + MPMX19_00542 0.70 +0.3 558,509 + MPMX19_00542 0.70 +0.4 558,510 - MPMX19_00542 0.71 -0.9 558,510 - MPMX19_00542 0.71 -2.4 558,510 - MPMX19_00542 0.71 -1.7 558,626 - MPMX19_00542 0.84 -1.1 558,626 - MPMX19_00542 0.84 -0.0 558,767 + -1.7 558,767 + +0.6 558,767 + -1.7 558,767 + +0.5 558,767 + -1.7 558,767 + -1.0 558,767 + -1.4 558,767 + -0.2 558,767 + +0.8 558,768 - -1.7 558,768 - -1.5 558,768 - -0.3 558,768 - +0.4 558,768 - -0.8 558,768 - -1.1 558,768 - +1.2 558,993 + MPMX19_00543 0.37 -0.2 558,993 + MPMX19_00543 0.37 -0.2 558,993 + MPMX19_00543 0.37 +0.2 558,993 + MPMX19_00543 0.37 -1.0 558,994 - MPMX19_00543 0.37 +1.0 558,994 - MPMX19_00543 0.37 -0.8 558,994 - MPMX19_00543 0.37 -1.0 559,205 + MPMX19_00543 0.70 -1.8 559,635 - MPMX19_00544 0.47 +0.2 559,635 - MPMX19_00544 0.47 -1.0 559,751 + MPMX19_00544 0.70 -0.6 559,752 - MPMX19_00544 0.70 -1.8 559,752 - MPMX19_00544 0.70 -1.7 560,215 + MPMX19_00545 0.59 -0.9 560,215 + MPMX19_00545 0.59 +0.1 560,215 + MPMX19_00545 0.59 -0.3 560,215 + MPMX19_00545 0.59 -1.4 560,215 + MPMX19_00545 0.59 -0.9 560,215 + MPMX19_00545 0.59 -0.5 560,216 - MPMX19_00545 0.60 -1.4 560,216 - MPMX19_00545 0.60 +0.3 560,216 - MPMX19_00545 0.60 -1.0 560,242 + MPMX19_00545 0.64 -0.6 560,242 + MPMX19_00545 0.64 -0.7 560,242 + MPMX19_00545 0.64 +0.2 560,242 + MPMX19_00545 0.64 -1.2 560,242 + MPMX19_00545 0.64 -0.9 560,242 + MPMX19_00545 0.64 -1.5 560,242 + MPMX19_00545 0.64 +0.2 560,243 - MPMX19_00545 0.65 -0.0 560,243 - MPMX19_00545 0.65 +0.5 560,243 - MPMX19_00545 0.65 +1.4 560,243 - MPMX19_00545 0.65 -0.4 560,243 - MPMX19_00545 0.65 -0.7 560,254 + MPMX19_00545 0.67 -0.4 560,254 + MPMX19_00545 0.67 -1.1 560,254 + MPMX19_00545 0.67 +1.8 560,254 + MPMX19_00545 0.67 -0.1 560,254 + MPMX19_00545 0.67 -1.9 560,255 - MPMX19_00545 0.67 +0.8 560,255 - MPMX19_00545 0.67 -0.1 560,255 - MPMX19_00545 0.67 -0.3 560,296 + MPMX19_00545 0.75 -0.3 560,297 - MPMX19_00545 0.75 -0.7 560,297 - MPMX19_00545 0.75 -0.8 560,428 + +0.2 560,429 - -0.8 560,429 - -0.4 560,455 + -0.4 560,455 + -0.9 560,455 + -0.6 560,455 + +0.3 560,455 + -0.2 560,455 + -0.1 560,455 + -0.2 560,455 + -0.7 560,455 + -0.5 560,455 + -0.5 560,455 + +0.2 560,455 + +0.2 560,455 + -0.8 560,455 + -0.8 560,455 + +0.8 560,455 + -0.5 560,456 - -0.2 560,456 - +1.2 560,456 - -1.1 560,456 - -0.2 560,456 - +1.1 560,456 - +0.9 560,456 - -1.1 560,456 - -0.5 560,456 - +0.4 560,456 - -0.6 560,456 - -0.5 560,456 - -0.8 560,653 + +0.7 560,653 + -0.1 560,653 + -0.8 560,653 + -0.5 560,654 - +0.2 560,654 - -1.6 560,716 - -1.1 560,716 - -1.7 560,716 - +0.1 560,730 + -0.6 560,730 + -0.9 560,730 + +0.1 560,730 + +1.6 560,730 + +0.0 560,730 + +1.2 560,730 + -0.4 560,730 + -1.2 560,730 + +0.5 560,730 + -1.7 560,731 - +1.1 560,731 - -0.1 560,731 - +0.1 560,731 - -0.4 560,731 - +0.1 560,731 - +0.5 560,731 - -0.6 560,731 - +0.2 560,903 + +0.2 560,903 + -0.3 560,903 + -0.5 560,903 + -0.6 560,903 + +0.7 560,903 + -1.0 560,903 + -0.2 560,903 + -1.3
Or see this region's nucleotide sequence