Experiment: Bas69
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt eutC and eutL are separated by 9 nucleotides eutL and eutK are separated by 12 nucleotides eutK and eutR are separated by 45 nucleotides
OKFHMN_22075: eutC - ethanolamine ammonia-lyase subunit beta, at 4,294,179 to 4,295,066
eutC
OKFHMN_22080: eutL - ethanolamine utilization microcompartment protein EutL, at 4,295,076 to 4,295,735
eutL
OKFHMN_22085: eutK - ethanolamine utilization microcompartment protein EutK, at 4,295,748 to 4,296,248
eutK
OKFHMN_22090: eutR - HTH-type transcriptional regulator EutR, at 4,296,294 to 4,297,346
eutR
Position (kb) 4295
4296
4297 Strain fitness (log2 ratio) -2
-1
0
1 at 4294.953 kb on - strand, within eutC at 4294.953 kb on - strand, within eutC at 4295.025 kb on - strand at 4295.065 kb on - strand at 4295.087 kb on - strand at 4295.175 kb on - strand, within eutL at 4295.215 kb on + strand, within eutL at 4295.215 kb on + strand, within eutL at 4295.220 kb on + strand, within eutL at 4295.220 kb on + strand, within eutL at 4295.258 kb on - strand, within eutL at 4295.258 kb on - strand, within eutL at 4295.266 kb on + strand, within eutL at 4295.266 kb on + strand, within eutL at 4295.267 kb on - strand, within eutL at 4295.267 kb on - strand, within eutL at 4295.268 kb on + strand, within eutL at 4295.269 kb on - strand, within eutL at 4295.283 kb on + strand, within eutL at 4295.393 kb on + strand, within eutL at 4295.458 kb on + strand, within eutL at 4295.458 kb on + strand, within eutL at 4295.459 kb on - strand, within eutL at 4295.478 kb on + strand, within eutL at 4295.478 kb on + strand, within eutL at 4295.478 kb on + strand, within eutL at 4295.523 kb on + strand, within eutL at 4295.523 kb on + strand, within eutL at 4295.588 kb on - strand, within eutL at 4295.588 kb on - strand, within eutL at 4295.601 kb on + strand, within eutL at 4295.602 kb on - strand, within eutL at 4295.602 kb on - strand, within eutL at 4295.624 kb on + strand, within eutL at 4295.733 kb on + strand at 4295.829 kb on - strand, within eutK at 4296.109 kb on + strand, within eutK at 4296.110 kb on - strand, within eutK at 4296.110 kb on - strand, within eutK at 4296.208 kb on + strand at 4296.212 kb on + strand at 4296.288 kb on - strand at 4296.288 kb on - strand at 4296.308 kb on + strand at 4296.331 kb on - strand at 4296.384 kb on - strand at 4296.689 kb on + strand, within eutR at 4296.779 kb on - strand, within eutR at 4296.782 kb on - strand, within eutR at 4296.782 kb on - strand, within eutR at 4296.782 kb on - strand, within eutR at 4296.782 kb on - strand, within eutR at 4296.785 kb on + strand, within eutR at 4296.785 kb on + strand, within eutR at 4296.785 kb on + strand, within eutR at 4296.785 kb on + strand, within eutR at 4296.785 kb on + strand, within eutR at 4296.785 kb on + strand, within eutR at 4296.786 kb on - strand, within eutR at 4296.786 kb on - strand, within eutR at 4296.786 kb on - strand, within eutR at 4296.786 kb on - strand, within eutR at 4296.827 kb on + strand, within eutR at 4297.005 kb on + strand, within eutR at 4297.006 kb on - strand, within eutR at 4297.035 kb on + strand, within eutR at 4297.083 kb on - strand, within eutR at 4297.225 kb on + strand, within eutR
Per-strain Table
Position Strand Gene LocusTag Fraction Bas69 remove 4,294,953 - eutC OKFHMN_22075 0.87 +0.3 4,294,953 - eutC OKFHMN_22075 0.87 +0.5 4,295,025 - -0.6 4,295,065 - -0.4 4,295,087 - +0.8 4,295,175 - eutL OKFHMN_22080 0.15 -2.2 4,295,215 + eutL OKFHMN_22080 0.21 -1.4 4,295,215 + eutL OKFHMN_22080 0.21 +0.8 4,295,220 + eutL OKFHMN_22080 0.22 +0.8 4,295,220 + eutL OKFHMN_22080 0.22 +0.2 4,295,258 - eutL OKFHMN_22080 0.28 -0.1 4,295,258 - eutL OKFHMN_22080 0.28 -0.1 4,295,266 + eutL OKFHMN_22080 0.29 +0.2 4,295,266 + eutL OKFHMN_22080 0.29 -0.6 4,295,267 - eutL OKFHMN_22080 0.29 +0.2 4,295,267 - eutL OKFHMN_22080 0.29 -0.1 4,295,268 + eutL OKFHMN_22080 0.29 +1.2 4,295,269 - eutL OKFHMN_22080 0.29 +1.3 4,295,283 + eutL OKFHMN_22080 0.31 +0.6 4,295,393 + eutL OKFHMN_22080 0.48 +1.4 4,295,458 + eutL OKFHMN_22080 0.58 -0.1 4,295,458 + eutL OKFHMN_22080 0.58 -1.2 4,295,459 - eutL OKFHMN_22080 0.58 +0.0 4,295,478 + eutL OKFHMN_22080 0.61 +0.1 4,295,478 + eutL OKFHMN_22080 0.61 -1.1 4,295,478 + eutL OKFHMN_22080 0.61 +0.2 4,295,523 + eutL OKFHMN_22080 0.68 +0.6 4,295,523 + eutL OKFHMN_22080 0.68 -0.0 4,295,588 - eutL OKFHMN_22080 0.78 -1.1 4,295,588 - eutL OKFHMN_22080 0.78 -0.6 4,295,601 + eutL OKFHMN_22080 0.80 +0.2 4,295,602 - eutL OKFHMN_22080 0.80 -0.7 4,295,602 - eutL OKFHMN_22080 0.80 -0.8 4,295,624 + eutL OKFHMN_22080 0.83 +0.9 4,295,733 + +0.6 4,295,829 - eutK OKFHMN_22085 0.16 +0.0 4,296,109 + eutK OKFHMN_22085 0.72 -0.8 4,296,110 - eutK OKFHMN_22085 0.72 -0.6 4,296,110 - eutK OKFHMN_22085 0.72 +0.2 4,296,208 + +0.7 4,296,212 + -0.1 4,296,288 - -1.1 4,296,288 - +1.7 4,296,308 + -0.1 4,296,331 - -0.1 4,296,384 - -0.3 4,296,689 + eutR OKFHMN_22090 0.38 +0.6 4,296,779 - eutR OKFHMN_22090 0.46 -0.3 4,296,782 - eutR OKFHMN_22090 0.46 -0.2 4,296,782 - eutR OKFHMN_22090 0.46 +0.7 4,296,782 - eutR OKFHMN_22090 0.46 -0.5 4,296,782 - eutR OKFHMN_22090 0.46 +0.3 4,296,785 + eutR OKFHMN_22090 0.47 -1.3 4,296,785 + eutR OKFHMN_22090 0.47 +1.0 4,296,785 + eutR OKFHMN_22090 0.47 +0.3 4,296,785 + eutR OKFHMN_22090 0.47 -0.7 4,296,785 + eutR OKFHMN_22090 0.47 -1.1 4,296,785 + eutR OKFHMN_22090 0.47 +1.2 4,296,786 - eutR OKFHMN_22090 0.47 +0.3 4,296,786 - eutR OKFHMN_22090 0.47 +0.1 4,296,786 - eutR OKFHMN_22090 0.47 -0.0 4,296,786 - eutR OKFHMN_22090 0.47 -0.4 4,296,827 + eutR OKFHMN_22090 0.51 -0.8 4,297,005 + eutR OKFHMN_22090 0.68 +1.7 4,297,006 - eutR OKFHMN_22090 0.68 +0.2 4,297,035 + eutR OKFHMN_22090 0.70 +0.2 4,297,083 - eutR OKFHMN_22090 0.75 +0.3 4,297,225 + eutR OKFHMN_22090 0.88 +0.2
Or see this region's nucleotide sequence