Strain Fitness in Escherichia coli ECRC100 around OKFHMN_10665

Experiment: Bas69

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntmurE and ftsI overlap by 14 nucleotidesftsI and OKFHMN_10670 are separated by 15 nucleotidesOKFHMN_10670 and rsmH overlap by 4 nucleotides OKFHMN_10660: murE - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-di aminopimelate ligase, at 2,003,933 to 2,005,420 murE OKFHMN_10665: ftsI - peptidoglycan glycosyltransferase FtsI, at 2,005,407 to 2,007,173 ftsI OKFHMN_10670: OKFHMN_10670 - penicillin-binding protein PBP3 FtsI, at 2,007,189 to 2,007,554 _10670 OKFHMN_10675: rsmH - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 2,007,551 to 2,008,492 rsmH Position (kb) 2005 2006 2007 2008Strain fitness (log2 ratio) -1 0 1at 2007.575 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas69
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2,007,575 - -0.8

Or see this region's nucleotide sequence