Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01998

Experiment: NLN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLN
2,084,997	+		MPMX19_01997	0.60	-0.4
2,085,361	-		MPMX19_01997	0.85	-1.6
2,085,610	+				+0.2
2,085,610	+				+0.1
2,085,611	-				-0.4
2,085,613	+				-0.4
2,085,613	+				-0.9
2,085,613	+				-0.0
2,085,613	+				+1.6
2,085,614	-				-1.4
2,085,614	-				-0.3
2,085,645	+				+0.4
2,085,679	+				-1.2
2,085,817	+				-0.0
2,085,817	+				-1.2
2,085,817	+				-1.0
2,085,817	+				-0.8
2,085,817	+				+0.6
2,085,817	+				+0.6
2,085,817	+				+0.6
2,085,818	-				-0.2
2,085,818	-				-0.6
2,085,818	-				-1.2
2,085,818	-				-0.3
2,085,818	-				-1.6
2,085,818	-				-2.5
2,085,818	-				+1.6
2,085,818	-				-1.0
2,085,818	-				-1.0
2,085,818	-				+1.6
2,085,820	-				-0.2
2,086,030	+		MPMX19_01998	0.21	-2.0
2,086,031	-		MPMX19_01998	0.21	-0.8
2,086,336	+		MPMX19_01998	0.43	-0.0
2,086,336	+		MPMX19_01998	0.43	-1.0
2,086,336	+		MPMX19_01998	0.43	-1.8
2,086,337	-		MPMX19_01998	0.43	-0.0
2,086,337	-		MPMX19_01998	0.43	-0.0
2,086,337	-		MPMX19_01998	0.43	-0.1
2,086,337	-		MPMX19_01998	0.43	-0.6
2,086,337	-		MPMX19_01998	0.43	-1.0
2,086,465	+		MPMX19_01998	0.52	-0.0
2,086,465	+		MPMX19_01998	0.52	-0.4
2,086,466	-		MPMX19_01998	0.52	-0.4
2,086,466	-		MPMX19_01998	0.52	-1.6
2,086,466	-		MPMX19_01998	0.52	-1.0
2,086,466	-		MPMX19_01998	0.52	-0.9
2,086,466	-		MPMX19_01998	0.52	-0.8
2,086,522	+		MPMX19_01998	0.56	-2.0
2,086,558	+		MPMX19_01998	0.59	-1.6
2,086,558	+		MPMX19_01998	0.59	-1.8
2,086,558	+		MPMX19_01998	0.59	+0.6
2,086,558	+		MPMX19_01998	0.59	-1.4
2,086,559	-		MPMX19_01998	0.59	-0.0
2,086,559	-		MPMX19_01998	0.59	-1.0
2,086,559	-		MPMX19_01998	0.59	+0.6
2,086,559	-		MPMX19_01998	0.59	-1.4
2,086,559	-		MPMX19_01998	0.59	-3.0
2,086,714	+		MPMX19_01998	0.70	-1.6
2,086,714	+		MPMX19_01998	0.70	-0.8
2,086,714	+		MPMX19_01998	0.70	-1.2
2,086,714	+		MPMX19_01998	0.70	-1.0
2,086,714	+		MPMX19_01998	0.70	+0.2
2,086,714	+		MPMX19_01998	0.70	-1.0
2,086,714	+		MPMX19_01998	0.70	-0.8
2,086,714	+		MPMX19_01998	0.70	-1.6
2,086,714	+		MPMX19_01998	0.70	-1.4
2,086,714	+		MPMX19_01998	0.70	-0.8
2,086,714	+		MPMX19_01998	0.70	-1.2
2,086,714	+		MPMX19_01998	0.70	-0.5
2,086,714	+		MPMX19_01998	0.70	-0.2
2,086,715	-		MPMX19_01998	0.70	-1.0
2,086,715	-		MPMX19_01998	0.70	-2.5
2,086,715	-		MPMX19_01998	0.70	-0.8
2,086,715	-		MPMX19_01998	0.70	-1.0
2,086,715	-		MPMX19_01998	0.70	-0.8
2,086,715	-		MPMX19_01998	0.70	-1.6
2,087,010	+				-1.2
2,087,010	+				-1.8
2,087,010	+				-0.9
2,087,010	+				-1.2
2,087,137	+				-0.2
2,087,137	+				-0.8
2,087,137	+				-0.2
2,087,137	+				-0.6
2,087,137	+				+0.1
2,087,137	+				+0.0
2,087,137	+				+0.4
2,087,137	+				-2.8
2,087,137	+				+1.2
2,087,138	-				+0.2
2,087,138	-				-0.1
2,087,138	-				-0.2
2,087,138	-				-1.2
2,087,138	-				+0.8
2,087,203	+				+1.3
2,087,203	+				+1.1
2,087,203	+				-0.3
2,087,248	+				+1.2
2,087,248	+				-0.0
2,087,248	+				-1.0
2,087,248	+				-0.3
2,087,248	+				-0.0
2,087,249	-				-0.2
2,087,293	+				+0.6
2,087,293	+				+0.8
2,087,293	+				-0.6
2,087,293	+				-0.3
2,087,294	-				-1.2
2,087,294	-				-0.0
2,087,294	-				-0.6
2,087,294	-				+0.1
2,087,294	-				-0.3
2,087,294	-				-2.0
2,087,294	-				+0.5
2,087,308	+				+0.3
2,087,308	+				-0.2
2,087,308	+				-0.0
2,087,309	-				-0.2
2,087,309	-				-0.9
2,087,309	-				-0.2
2,087,309	-				+0.3
2,087,422	+		MPMX19_01999	0.17	+0.6
2,087,422	+		MPMX19_01999	0.17	+0.6
2,087,449	+		MPMX19_01999	0.19	+0.8
2,087,450	-		MPMX19_01999	0.19	+0.8
2,087,452	+		MPMX19_01999	0.19	+0.1
2,087,452	+		MPMX19_01999	0.19	+1.6
2,087,452	+		MPMX19_01999	0.19	+0.6
2,087,452	+		MPMX19_01999	0.19	-0.4
2,087,452	+		MPMX19_01999	0.19	-0.8
2,087,452	+		MPMX19_01999	0.19	-1.9
2,087,453	-		MPMX19_01999	0.19	+0.5
2,087,453	-		MPMX19_01999	0.19	+1.2
2,087,453	-		MPMX19_01999	0.19	+0.3
2,087,453	-		MPMX19_01999	0.19	+1.3
2,087,453	-		MPMX19_01999	0.19	-0.2
2,087,453	-		MPMX19_01999	0.19	-0.6
2,087,626	+		MPMX19_01999	0.32	-1.9
2,087,627	-		MPMX19_01999	0.32	-1.0
2,087,707	+		MPMX19_01999	0.39	+0.8
2,087,708	-		MPMX19_01999	0.39	+0.0
2,087,708	-		MPMX19_01999	0.39	+0.2
2,087,708	-		MPMX19_01999	0.39	+0.6
2,087,776	+		MPMX19_01999	0.44	+0.3
2,087,777	-		MPMX19_01999	0.44	+0.5
2,087,777	-		MPMX19_01999	0.44	-1.0
2,087,777	-		MPMX19_01999	0.44	-0.2
2,087,777	-		MPMX19_01999	0.44	-0.1
2,088,031	+		MPMX19_01999	0.63	+0.3
2,088,031	+		MPMX19_01999	0.63	+1.5
2,088,031	+		MPMX19_01999	0.63	-1.4
2,088,031	+		MPMX19_01999	0.63	-0.8
2,088,032	-		MPMX19_01999	0.63	-2.2
2,088,032	-		MPMX19_01999	0.63	+0.7
2,088,032	-		MPMX19_01999	0.63	+0.6
2,088,032	-		MPMX19_01999	0.63	+0.4
2,088,032	-		MPMX19_01999	0.63	+0.3
2,088,032	-		MPMX19_01999	0.63	+0.1
2,088,043	+		MPMX19_01999	0.64	+0.2
2,088,044	-		MPMX19_01999	0.64	-0.7
2,088,064	+		MPMX19_01999	0.66	-1.1
2,088,064	+		MPMX19_01999	0.66	-0.2
2,088,064	+		MPMX19_01999	0.66	-0.8
2,088,065	-		MPMX19_01999	0.66	-0.0
2,088,065	-		MPMX19_01999	0.66	-1.8
2,088,065	-		MPMX19_01999	0.66	-1.0
2,088,065	-		MPMX19_01999	0.66	-1.4