Experiment: Control_ECOR27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_22865 and NOLOHH_22870 are separated by 149 nucleotides NOLOHH_22870 and NOLOHH_22875 overlap by 4 nucleotides NOLOHH_22875 and NOLOHH_22880 overlap by 17 nucleotides
NOLOHH_22865: NOLOHH_22865 - ORF11CD3 domain-containing protein, at 4,516,840 to 4,517,445
_22865
NOLOHH_22870: NOLOHH_22870 - lysis protein, at 4,517,595 to 4,518,032
_22870
NOLOHH_22875: NOLOHH_22875 - Endolysin, at 4,518,029 to 4,518,505
_22875
NOLOHH_22880: NOLOHH_22880 - phage holin, lambda family, at 4,518,489 to 4,518,812
_22880
Position (kb)
4517
4518
4519 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4516.625 kb on + strand at 4516.637 kb on - strand at 4516.661 kb on - strand at 4516.798 kb on - strand at 4516.845 kb on + strand at 4516.846 kb on - strand at 4516.846 kb on - strand at 4516.904 kb on - strand, within NOLOHH_22865 at 4516.954 kb on - strand, within NOLOHH_22865 at 4516.954 kb on - strand, within NOLOHH_22865 at 4516.954 kb on - strand, within NOLOHH_22865 at 4516.979 kb on + strand, within NOLOHH_22865 at 4516.979 kb on + strand, within NOLOHH_22865 at 4516.979 kb on + strand, within NOLOHH_22865 at 4516.980 kb on - strand, within NOLOHH_22865 at 4516.980 kb on - strand, within NOLOHH_22865 at 4516.980 kb on - strand, within NOLOHH_22865 at 4516.980 kb on - strand, within NOLOHH_22865 at 4516.991 kb on - strand, within NOLOHH_22865 at 4517.029 kb on - strand, within NOLOHH_22865 at 4517.053 kb on - strand, within NOLOHH_22865 at 4517.062 kb on + strand, within NOLOHH_22865 at 4517.062 kb on + strand, within NOLOHH_22865 at 4517.063 kb on - strand, within NOLOHH_22865 at 4517.063 kb on - strand, within NOLOHH_22865 at 4517.063 kb on - strand, within NOLOHH_22865 at 4517.063 kb on - strand, within NOLOHH_22865 at 4517.063 kb on - strand, within NOLOHH_22865 at 4517.063 kb on - strand, within NOLOHH_22865 at 4517.064 kb on + strand, within NOLOHH_22865 at 4517.065 kb on - strand, within NOLOHH_22865 at 4517.065 kb on - strand, within NOLOHH_22865 at 4517.067 kb on - strand, within NOLOHH_22865 at 4517.067 kb on - strand, within NOLOHH_22865 at 4517.131 kb on - strand, within NOLOHH_22865 at 4517.255 kb on - strand, within NOLOHH_22865 at 4517.329 kb on - strand, within NOLOHH_22865 at 4517.333 kb on - strand, within NOLOHH_22865 at 4517.366 kb on - strand, within NOLOHH_22865 at 4517.521 kb on - strand at 4517.525 kb on - strand at 4517.575 kb on - strand at 4517.616 kb on - strand at 4517.620 kb on + strand at 4517.621 kb on - strand at 4517.621 kb on - strand at 4517.621 kb on - strand at 4517.632 kb on + strand at 4517.632 kb on + strand at 4517.680 kb on + strand, within NOLOHH_22870 at 4517.680 kb on + strand, within NOLOHH_22870 at 4517.681 kb on - strand, within NOLOHH_22870 at 4517.702 kb on + strand, within NOLOHH_22870 at 4517.703 kb on - strand, within NOLOHH_22870 at 4517.852 kb on - strand, within NOLOHH_22870 at 4517.871 kb on + strand, within NOLOHH_22870 at 4517.871 kb on + strand, within NOLOHH_22870 at 4517.894 kb on + strand, within NOLOHH_22870 at 4517.894 kb on + strand, within NOLOHH_22870 at 4518.094 kb on + strand, within NOLOHH_22875 at 4518.139 kb on + strand, within NOLOHH_22875 at 4518.170 kb on - strand, within NOLOHH_22875 at 4518.271 kb on + strand, within NOLOHH_22875 at 4518.271 kb on + strand, within NOLOHH_22875 at 4518.272 kb on - strand, within NOLOHH_22875 at 4518.272 kb on - strand, within NOLOHH_22875 at 4518.276 kb on + strand, within NOLOHH_22875 at 4518.383 kb on + strand, within NOLOHH_22875 at 4518.481 kb on + strand at 4518.482 kb on - strand at 4518.563 kb on + strand, within NOLOHH_22880 at 4518.571 kb on + strand, within NOLOHH_22880 at 4518.591 kb on + strand, within NOLOHH_22880 at 4518.593 kb on + strand, within NOLOHH_22880 at 4518.593 kb on + strand, within NOLOHH_22880 at 4518.593 kb on + strand, within NOLOHH_22880 at 4518.594 kb on - strand, within NOLOHH_22880 at 4518.594 kb on - strand, within NOLOHH_22880 at 4518.594 kb on - strand, within NOLOHH_22880 at 4518.594 kb on - strand, within NOLOHH_22880 at 4518.594 kb on - strand, within NOLOHH_22880 at 4518.595 kb on + strand, within NOLOHH_22880 at 4518.595 kb on + strand, within NOLOHH_22880 at 4518.595 kb on + strand, within NOLOHH_22880 at 4518.596 kb on - strand, within NOLOHH_22880 at 4518.596 kb on - strand, within NOLOHH_22880 at 4518.596 kb on - strand, within NOLOHH_22880 at 4518.596 kb on - strand, within NOLOHH_22880 at 4518.596 kb on - strand, within NOLOHH_22880 at 4518.596 kb on - strand, within NOLOHH_22880 at 4518.608 kb on + strand, within NOLOHH_22880 at 4518.608 kb on + strand, within NOLOHH_22880 at 4518.612 kb on + strand, within NOLOHH_22880 at 4518.612 kb on + strand, within NOLOHH_22880 at 4518.612 kb on + strand, within NOLOHH_22880 at 4518.612 kb on + strand, within NOLOHH_22880 at 4518.679 kb on - strand, within NOLOHH_22880 at 4518.704 kb on + strand, within NOLOHH_22880 at 4518.704 kb on + strand, within NOLOHH_22880 at 4518.705 kb on - strand, within NOLOHH_22880 at 4518.705 kb on - strand, within NOLOHH_22880 at 4518.706 kb on + strand, within NOLOHH_22880 at 4518.706 kb on + strand, within NOLOHH_22880 at 4518.706 kb on + strand, within NOLOHH_22880 at 4518.706 kb on + strand, within NOLOHH_22880 at 4518.707 kb on - strand, within NOLOHH_22880 at 4518.707 kb on - strand, within NOLOHH_22880 at 4518.721 kb on + strand, within NOLOHH_22880 at 4518.817 kb on + strand at 4518.827 kb on - strand at 4518.841 kb on + strand at 4518.845 kb on + strand at 4518.845 kb on + strand at 4518.871 kb on + strand at 4518.887 kb on + strand at 4518.896 kb on + strand at 4518.896 kb on + strand at 4518.897 kb on - strand at 4518.897 kb on - strand at 4518.992 kb on + strand at 4518.992 kb on + strand at 4518.993 kb on - strand at 4519.008 kb on - strand at 4519.008 kb on - strand at 4519.012 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECOR27 remove 4,516,625 + +0.1 4,516,637 - +2.0 4,516,661 - -0.0 4,516,798 - +1.7 4,516,845 + +1.7 4,516,846 - +0.9 4,516,846 - +0.5 4,516,904 - NOLOHH_22865 0.11 -0.6 4,516,954 - NOLOHH_22865 0.19 -0.6 4,516,954 - NOLOHH_22865 0.19 +0.4 4,516,954 - NOLOHH_22865 0.19 -1.2 4,516,979 + NOLOHH_22865 0.23 -0.9 4,516,979 + NOLOHH_22865 0.23 +1.7 4,516,979 + NOLOHH_22865 0.23 +0.7 4,516,980 - NOLOHH_22865 0.23 -0.6 4,516,980 - NOLOHH_22865 0.23 -0.3 4,516,980 - NOLOHH_22865 0.23 +2.7 4,516,980 - NOLOHH_22865 0.23 -0.9 4,516,991 - NOLOHH_22865 0.25 +0.0 4,517,029 - NOLOHH_22865 0.31 +2.0 4,517,053 - NOLOHH_22865 0.35 -0.3 4,517,062 + NOLOHH_22865 0.37 +1.3 4,517,062 + NOLOHH_22865 0.37 +0.7 4,517,063 - NOLOHH_22865 0.37 +0.8 4,517,063 - NOLOHH_22865 0.37 +0.7 4,517,063 - NOLOHH_22865 0.37 +1.0 4,517,063 - NOLOHH_22865 0.37 +0.9 4,517,063 - NOLOHH_22865 0.37 -0.3 4,517,063 - NOLOHH_22865 0.37 +0.7 4,517,064 + NOLOHH_22865 0.37 -0.3 4,517,065 - NOLOHH_22865 0.37 +0.1 4,517,065 - NOLOHH_22865 0.37 -1.3 4,517,067 - NOLOHH_22865 0.37 +0.1 4,517,067 - NOLOHH_22865 0.37 +0.4 4,517,131 - NOLOHH_22865 0.48 -1.2 4,517,255 - NOLOHH_22865 0.68 -0.1 4,517,329 - NOLOHH_22865 0.81 +0.4 4,517,333 - NOLOHH_22865 0.81 +0.7 4,517,366 - NOLOHH_22865 0.87 +0.6 4,517,521 - -0.3 4,517,525 - -0.9 4,517,575 - -0.4 4,517,616 - +0.7 4,517,620 + +0.7 4,517,621 - +0.9 4,517,621 - -0.9 4,517,621 - -0.2 4,517,632 + +0.7 4,517,632 + -0.1 4,517,680 + NOLOHH_22870 0.19 +0.1 4,517,680 + NOLOHH_22870 0.19 -0.6 4,517,681 - NOLOHH_22870 0.20 -0.7 4,517,702 + NOLOHH_22870 0.24 +0.1 4,517,703 - NOLOHH_22870 0.25 -1.3 4,517,852 - NOLOHH_22870 0.59 +0.5 4,517,871 + NOLOHH_22870 0.63 -1.1 4,517,871 + NOLOHH_22870 0.63 +0.1 4,517,894 + NOLOHH_22870 0.68 +0.7 4,517,894 + NOLOHH_22870 0.68 -1.6 4,518,094 + NOLOHH_22875 0.14 +0.7 4,518,139 + NOLOHH_22875 0.23 +0.3 4,518,170 - NOLOHH_22875 0.30 +0.3 4,518,271 + NOLOHH_22875 0.51 -0.9 4,518,271 + NOLOHH_22875 0.51 -1.3 4,518,272 - NOLOHH_22875 0.51 -0.3 4,518,272 - NOLOHH_22875 0.51 +1.9 4,518,276 + NOLOHH_22875 0.52 -0.4 4,518,383 + NOLOHH_22875 0.74 +0.4 4,518,481 + -0.3 4,518,482 - +1.7 4,518,563 + NOLOHH_22880 0.23 +0.1 4,518,571 + NOLOHH_22880 0.25 -0.4 4,518,591 + NOLOHH_22880 0.31 +0.7 4,518,593 + NOLOHH_22880 0.32 -0.2 4,518,593 + NOLOHH_22880 0.32 -1.7 4,518,593 + NOLOHH_22880 0.32 -0.4 4,518,594 - NOLOHH_22880 0.32 -1.3 4,518,594 - NOLOHH_22880 0.32 +0.7 4,518,594 - NOLOHH_22880 0.32 +0.7 4,518,594 - NOLOHH_22880 0.32 +0.5 4,518,594 - NOLOHH_22880 0.32 -0.3 4,518,595 + NOLOHH_22880 0.33 +0.7 4,518,595 + NOLOHH_22880 0.33 -0.5 4,518,595 + NOLOHH_22880 0.33 -2.6 4,518,596 - NOLOHH_22880 0.33 -0.3 4,518,596 - NOLOHH_22880 0.33 +2.1 4,518,596 - NOLOHH_22880 0.33 -1.0 4,518,596 - NOLOHH_22880 0.33 -1.3 4,518,596 - NOLOHH_22880 0.33 -0.9 4,518,596 - NOLOHH_22880 0.33 +0.7 4,518,608 + NOLOHH_22880 0.37 +1.0 4,518,608 + NOLOHH_22880 0.37 +1.5 4,518,612 + NOLOHH_22880 0.38 -0.3 4,518,612 + NOLOHH_22880 0.38 -0.7 4,518,612 + NOLOHH_22880 0.38 -2.3 4,518,612 + NOLOHH_22880 0.38 +1.7 4,518,679 - NOLOHH_22880 0.59 +1.7 4,518,704 + NOLOHH_22880 0.66 -1.2 4,518,704 + NOLOHH_22880 0.66 -0.5 4,518,705 - NOLOHH_22880 0.67 +0.4 4,518,705 - NOLOHH_22880 0.67 +1.7 4,518,706 + NOLOHH_22880 0.67 -0.9 4,518,706 + NOLOHH_22880 0.67 -0.9 4,518,706 + NOLOHH_22880 0.67 -0.9 4,518,706 + NOLOHH_22880 0.67 +2.3 4,518,707 - NOLOHH_22880 0.67 -1.5 4,518,707 - NOLOHH_22880 0.67 +0.0 4,518,721 + NOLOHH_22880 0.72 -1.6 4,518,817 + -0.3 4,518,827 - -3.7 4,518,841 + +0.1 4,518,845 + +2.3 4,518,845 + -1.0 4,518,871 + -0.3 4,518,887 + -0.5 4,518,896 + -1.3 4,518,896 + +1.5 4,518,897 - +0.7 4,518,897 - -1.1 4,518,992 + -0.1 4,518,992 + +0.7 4,518,993 - +0.7 4,519,008 - -0.5 4,519,008 - +1.7 4,519,012 - -1.1
Or see this region's nucleotide sequence