Experiment: Control_ECOR27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_22855 and NOLOHH_22860 overlap by 4 nucleotides NOLOHH_22860 and NOLOHH_22865 are separated by 528 nucleotides
NOLOHH_22855: NOLOHH_22855 - PBSX family phage terminase large subunit, at 4,514,375 to 4,515,787
_22855
NOLOHH_22860: NOLOHH_22860 - terminase small subunit, at 4,515,784 to 4,516,311
_22860
NOLOHH_22865: NOLOHH_22865 - ORF11CD3 domain-containing protein, at 4,516,840 to 4,517,445
_22865
Position (kb)
4515
4516
4517 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4514.785 kb on - strand, within NOLOHH_22855 at 4514.910 kb on + strand, within NOLOHH_22855 at 4514.910 kb on + strand, within NOLOHH_22855 at 4514.998 kb on + strand, within NOLOHH_22855 at 4515.031 kb on + strand, within NOLOHH_22855 at 4515.046 kb on + strand, within NOLOHH_22855 at 4515.046 kb on + strand, within NOLOHH_22855 at 4515.192 kb on + strand, within NOLOHH_22855 at 4515.193 kb on - strand, within NOLOHH_22855 at 4515.268 kb on - strand, within NOLOHH_22855 at 4515.306 kb on - strand, within NOLOHH_22855 at 4515.321 kb on + strand, within NOLOHH_22855 at 4515.321 kb on + strand, within NOLOHH_22855 at 4515.322 kb on - strand, within NOLOHH_22855 at 4515.362 kb on + strand, within NOLOHH_22855 at 4515.469 kb on + strand, within NOLOHH_22855 at 4515.469 kb on + strand, within NOLOHH_22855 at 4515.498 kb on + strand, within NOLOHH_22855 at 4515.499 kb on - strand, within NOLOHH_22855 at 4515.581 kb on + strand, within NOLOHH_22855 at 4515.649 kb on + strand at 4515.649 kb on + strand at 4515.706 kb on + strand at 4515.707 kb on - strand at 4515.739 kb on - strand at 4515.739 kb on - strand at 4515.770 kb on - strand at 4515.873 kb on + strand, within NOLOHH_22860 at 4515.874 kb on - strand, within NOLOHH_22860 at 4515.925 kb on - strand, within NOLOHH_22860 at 4516.017 kb on + strand, within NOLOHH_22860 at 4516.092 kb on + strand, within NOLOHH_22860 at 4516.110 kb on - strand, within NOLOHH_22860 at 4516.122 kb on + strand, within NOLOHH_22860 at 4516.210 kb on - strand, within NOLOHH_22860 at 4516.316 kb on + strand at 4516.316 kb on + strand at 4516.325 kb on + strand at 4516.329 kb on + strand at 4516.329 kb on + strand at 4516.338 kb on + strand at 4516.339 kb on - strand at 4516.346 kb on + strand at 4516.399 kb on + strand at 4516.407 kb on + strand at 4516.407 kb on + strand at 4516.461 kb on + strand at 4516.591 kb on + strand at 4516.625 kb on + strand at 4516.637 kb on - strand at 4516.661 kb on - strand at 4516.798 kb on - strand at 4516.845 kb on + strand at 4516.846 kb on - strand at 4516.846 kb on - strand at 4516.904 kb on - strand, within NOLOHH_22865 at 4516.954 kb on - strand, within NOLOHH_22865 at 4516.954 kb on - strand, within NOLOHH_22865 at 4516.954 kb on - strand, within NOLOHH_22865 at 4516.979 kb on + strand, within NOLOHH_22865 at 4516.979 kb on + strand, within NOLOHH_22865 at 4516.979 kb on + strand, within NOLOHH_22865 at 4516.980 kb on - strand, within NOLOHH_22865 at 4516.980 kb on - strand, within NOLOHH_22865 at 4516.980 kb on - strand, within NOLOHH_22865 at 4516.980 kb on - strand, within NOLOHH_22865 at 4516.991 kb on - strand, within NOLOHH_22865 at 4517.029 kb on - strand, within NOLOHH_22865 at 4517.053 kb on - strand, within NOLOHH_22865 at 4517.062 kb on + strand, within NOLOHH_22865 at 4517.062 kb on + strand, within NOLOHH_22865 at 4517.063 kb on - strand, within NOLOHH_22865 at 4517.063 kb on - strand, within NOLOHH_22865 at 4517.063 kb on - strand, within NOLOHH_22865 at 4517.063 kb on - strand, within NOLOHH_22865 at 4517.063 kb on - strand, within NOLOHH_22865 at 4517.063 kb on - strand, within NOLOHH_22865 at 4517.064 kb on + strand, within NOLOHH_22865 at 4517.065 kb on - strand, within NOLOHH_22865 at 4517.065 kb on - strand, within NOLOHH_22865 at 4517.067 kb on - strand, within NOLOHH_22865 at 4517.067 kb on - strand, within NOLOHH_22865 at 4517.131 kb on - strand, within NOLOHH_22865 at 4517.255 kb on - strand, within NOLOHH_22865
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECOR27 remove 4,514,785 - NOLOHH_22855 0.29 -0.9 4,514,910 + NOLOHH_22855 0.38 -0.3 4,514,910 + NOLOHH_22855 0.38 -0.9 4,514,998 + NOLOHH_22855 0.44 +0.1 4,515,031 + NOLOHH_22855 0.46 +2.3 4,515,046 + NOLOHH_22855 0.47 +1.7 4,515,046 + NOLOHH_22855 0.47 -0.4 4,515,192 + NOLOHH_22855 0.58 +0.7 4,515,193 - NOLOHH_22855 0.58 -1.6 4,515,268 - NOLOHH_22855 0.63 -1.9 4,515,306 - NOLOHH_22855 0.66 +1.1 4,515,321 + NOLOHH_22855 0.67 +0.1 4,515,321 + NOLOHH_22855 0.67 -0.5 4,515,322 - NOLOHH_22855 0.67 -1.9 4,515,362 + NOLOHH_22855 0.70 -0.9 4,515,469 + NOLOHH_22855 0.77 +3.1 4,515,469 + NOLOHH_22855 0.77 +0.7 4,515,498 + NOLOHH_22855 0.79 +0.7 4,515,499 - NOLOHH_22855 0.80 +0.7 4,515,581 + NOLOHH_22855 0.85 +0.7 4,515,649 + +0.1 4,515,649 + -0.7 4,515,706 + +0.7 4,515,707 - -1.9 4,515,739 - +0.7 4,515,739 - -0.1 4,515,770 - -0.3 4,515,873 + NOLOHH_22860 0.17 +2.7 4,515,874 - NOLOHH_22860 0.17 -2.7 4,515,925 - NOLOHH_22860 0.27 -0.9 4,516,017 + NOLOHH_22860 0.44 -1.3 4,516,092 + NOLOHH_22860 0.58 -1.0 4,516,110 - NOLOHH_22860 0.62 -0.5 4,516,122 + NOLOHH_22860 0.64 -0.5 4,516,210 - NOLOHH_22860 0.81 -0.6 4,516,316 + -2.3 4,516,316 + +0.1 4,516,325 + +0.4 4,516,329 + +0.2 4,516,329 + +0.7 4,516,338 + -0.5 4,516,339 - +0.7 4,516,346 + +0.1 4,516,399 + +0.5 4,516,407 + -0.3 4,516,407 + -1.1 4,516,461 + +1.1 4,516,591 + -0.3 4,516,625 + +0.1 4,516,637 - +2.0 4,516,661 - -0.0 4,516,798 - +1.7 4,516,845 + +1.7 4,516,846 - +0.9 4,516,846 - +0.5 4,516,904 - NOLOHH_22865 0.11 -0.6 4,516,954 - NOLOHH_22865 0.19 -0.6 4,516,954 - NOLOHH_22865 0.19 +0.4 4,516,954 - NOLOHH_22865 0.19 -1.2 4,516,979 + NOLOHH_22865 0.23 -0.9 4,516,979 + NOLOHH_22865 0.23 +1.7 4,516,979 + NOLOHH_22865 0.23 +0.7 4,516,980 - NOLOHH_22865 0.23 -0.6 4,516,980 - NOLOHH_22865 0.23 -0.3 4,516,980 - NOLOHH_22865 0.23 +2.7 4,516,980 - NOLOHH_22865 0.23 -0.9 4,516,991 - NOLOHH_22865 0.25 +0.0 4,517,029 - NOLOHH_22865 0.31 +2.0 4,517,053 - NOLOHH_22865 0.35 -0.3 4,517,062 + NOLOHH_22865 0.37 +1.3 4,517,062 + NOLOHH_22865 0.37 +0.7 4,517,063 - NOLOHH_22865 0.37 +0.8 4,517,063 - NOLOHH_22865 0.37 +0.7 4,517,063 - NOLOHH_22865 0.37 +1.0 4,517,063 - NOLOHH_22865 0.37 +0.9 4,517,063 - NOLOHH_22865 0.37 -0.3 4,517,063 - NOLOHH_22865 0.37 +0.7 4,517,064 + NOLOHH_22865 0.37 -0.3 4,517,065 - NOLOHH_22865 0.37 +0.1 4,517,065 - NOLOHH_22865 0.37 -1.3 4,517,067 - NOLOHH_22865 0.37 +0.1 4,517,067 - NOLOHH_22865 0.37 +0.4 4,517,131 - NOLOHH_22865 0.48 -1.2 4,517,255 - NOLOHH_22865 0.68 -0.1
Or see this region's nucleotide sequence