Strain Fitness in Escherichia coli ECOR27 around NOLOHH_11875

Experiment: Control_ECOR27

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Control_ECOR27
2,295,965	+	ygdR	NOLOHH_11865	0.68	-0.4
2,295,966	-	ygdR	NOLOHH_11865	0.68	+0.1
2,296,015	+				+0.6
2,296,019	-				+0.1
2,296,057	-				-0.8
2,296,060	+				-1.8
2,296,060	+				+1.6
2,296,060	+				-1.4
2,296,060	+				-0.4
2,296,061	-				-0.4
2,296,061	-				+0.2
2,296,061	-				+1.4
2,296,061	-				-0.7
2,296,061	-				+1.5
2,296,061	-				-3.0
2,296,061	-				-0.1
2,296,061	-				+1.5
2,296,066	-				+0.3
2,296,066	-				+0.0
2,296,068	+				-1.2
2,296,068	+				-0.7
2,296,069	-				+0.2
2,296,090	+				+1.6
2,296,090	+				-0.1
2,296,090	+				+1.6
2,296,091	-				-0.8
2,296,091	-				-1.0
2,296,091	-				-0.4
2,296,092	+				+0.6
2,296,092	+				-1.0
2,296,092	+				+1.1
2,296,092	+				+1.4
2,296,092	+				+0.3
2,296,092	+				-0.1
2,296,093	-				-0.8
2,296,093	-				+0.6
2,296,093	-				+1.1
2,296,093	-				-0.9
2,296,093	-				-0.1
2,296,093	-				+0.0
2,296,094	+				+0.8
2,296,094	+				-0.3
2,296,095	-				+1.6
2,296,172	-				+3.4
2,296,243	+				+0.6
2,296,243	+				+1.0
2,296,244	-				+0.9
2,296,244	-				+0.2
2,296,244	-				-0.8
2,296,244	-				+0.0
2,296,244	-				-0.4
2,296,249	+	ygdQ	NOLOHH_11870	0.11	+1.1
2,296,249	+	ygdQ	NOLOHH_11870	0.11	-1.4
2,296,418	+	ygdQ	NOLOHH_11870	0.34	+0.6
2,296,418	+	ygdQ	NOLOHH_11870	0.34	-0.4
2,296,419	-	ygdQ	NOLOHH_11870	0.34	+0.6
2,296,421	+	ygdQ	NOLOHH_11870	0.35	-0.8
2,296,422	-	ygdQ	NOLOHH_11870	0.35	+0.9
2,296,475	+	ygdQ	NOLOHH_11870	0.42	-0.2
2,296,476	-	ygdQ	NOLOHH_11870	0.42	-0.5
2,296,490	+	ygdQ	NOLOHH_11870	0.44	+0.4
2,296,490	+	ygdQ	NOLOHH_11870	0.44	-2.8
2,296,490	+	ygdQ	NOLOHH_11870	0.44	+1.5
2,296,491	-	ygdQ	NOLOHH_11870	0.45	-1.4
2,296,589	+	ygdQ	NOLOHH_11870	0.58	-0.6
2,296,590	-	ygdQ	NOLOHH_11870	0.58	+1.6
2,296,652	+	ygdQ	NOLOHH_11870	0.67	-1.0
2,296,652	+	ygdQ	NOLOHH_11870	0.67	+0.9
2,296,653	-	ygdQ	NOLOHH_11870	0.67	-0.4
2,296,796	+	ygdQ	NOLOHH_11870	0.87	+0.3
2,296,797	-	ygdQ	NOLOHH_11870	0.87	-0.2
2,296,797	-	ygdQ	NOLOHH_11870	0.87	-1.3
2,296,881	+				+0.6
2,296,888	+				+0.2
2,296,889	-				+0.6
2,296,918	-				+0.4
2,296,921	+				+0.3
2,296,921	+				+1.6
2,296,922	-				-0.2
2,296,922	-				+0.2
2,296,922	-				+1.6
2,296,922	-				-0.7
2,296,922	-				-0.8
2,296,923	+				+0.6
2,296,923	+				-0.6
2,296,923	+				-1.7
2,296,924	-				+0.2
2,296,924	-				+0.1
2,296,924	-				-0.2
2,296,982	+				-1.7
2,296,983	-				-0.4
2,297,097	-	mutH	NOLOHH_11875	0.21	+0.6
2,297,097	-	mutH	NOLOHH_11875	0.21	+2.6
2,297,103	-	mutH	NOLOHH_11875	0.21	+0.0
2,297,107	-	mutH	NOLOHH_11875	0.22	-0.1
2,297,162	+	mutH	NOLOHH_11875	0.30	-0.8
2,297,162	+	mutH	NOLOHH_11875	0.30	-0.2
2,297,163	-	mutH	NOLOHH_11875	0.30	-0.1
2,297,163	-	mutH	NOLOHH_11875	0.30	+1.2
2,297,163	-	mutH	NOLOHH_11875	0.30	-0.7
2,297,232	-	mutH	NOLOHH_11875	0.40	-0.4
2,297,232	-	mutH	NOLOHH_11875	0.40	-1.7
2,297,338	+	mutH	NOLOHH_11875	0.56	+0.8
2,297,405	-	mutH	NOLOHH_11875	0.65	-1.3
2,297,450	-	mutH	NOLOHH_11875	0.72	+0.6
2,297,450	-	mutH	NOLOHH_11875	0.72	-0.6
2,297,484	-	mutH	NOLOHH_11875	0.77	-1.0
2,297,514	-	mutH	NOLOHH_11875	0.81	+0.6
2,297,563	+	mutH	NOLOHH_11875	0.88	-0.4
2,297,563	+	mutH	NOLOHH_11875	0.88	-0.4
2,297,563	+	mutH	NOLOHH_11875	0.88	-0.1
2,297,564	-	mutH	NOLOHH_11875	0.88	-0.3
2,297,564	-	mutH	NOLOHH_11875	0.88	-0.8
2,297,564	-	mutH	NOLOHH_11875	0.88	+1.4
2,297,564	-	mutH	NOLOHH_11875	0.88	+0.7
2,297,564	-	mutH	NOLOHH_11875	0.88	+2.0
2,297,564	-	mutH	NOLOHH_11875	0.88	-1.1
2,297,564	-	mutH	NOLOHH_11875	0.88	-0.8
2,297,564	-	mutH	NOLOHH_11875	0.88	+0.3
2,297,564	-	mutH	NOLOHH_11875	0.88	-0.4
2,297,785	-				+0.3
2,297,824	+				-1.0
2,297,824	+				+1.6
2,297,825	-				-1.0
2,297,825	-				-0.6
2,297,825	-				-0.2
2,297,825	-				-1.7
2,297,873	+	ygdT	NOLOHH_11880	0.29	-3.1
2,297,873	+	ygdT	NOLOHH_11880	0.29	+0.6
2,297,886	+	ygdT	NOLOHH_11880	0.38	+0.8
2,297,886	+	ygdT	NOLOHH_11880	0.38	+0.2
2,297,939	+	ygdT	NOLOHH_11880	0.74	-1.3
2,297,959	-	ygdT	NOLOHH_11880	0.88	-0.2
2,297,993	-				+0.3
2,298,062	+				-1.2
2,298,201	+				+0.0
2,298,202	-				-1.0
2,298,213	+				-2.0
2,298,213	+				+0.3
2,298,213	+				-1.6
2,298,235	+				-0.8
2,298,238	+				+2.2
2,298,245	+				-1.4
2,298,300	+				-1.7
2,298,300	+				+0.3
2,298,300	+				+0.8
2,298,302	+				+1.6
2,298,304	+				+1.1
2,298,304	+				+0.0
2,298,304	+				+1.3
2,298,360	+				+0.6