Experiment: Control_ECOR27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yqiG and ygiL are separated by 50 nucleotides ygiL and ubiK are separated by 282 nucleotides ubiK and ribB are separated by 373 nucleotides
NOLOHH_10570: yqiG - Putative outer membrane usher protein YqiG, at 2,042,933 to 2,045,446
yqiG
NOLOHH_10575: ygiL - fimbrial-like protein, at 2,045,497 to 2,046,048
ygiL
NOLOHH_10580: ubiK - ubiquinone biosynthesis accessory factor UbiK, at 2,046,331 to 2,046,621
ubiK
NOLOHH_10585: ribB - 3,4-dihydroxy-2-butanone 4-phosphate synthase, at 2,046,995 to 2,047,648
ribB
Position (kb)
2046
2047 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2045.454 kb on + strand at 2045.515 kb on - strand at 2045.531 kb on + strand at 2045.572 kb on - strand, within ygiL at 2045.605 kb on - strand, within ygiL at 2045.608 kb on - strand, within ygiL at 2045.619 kb on + strand, within ygiL at 2045.619 kb on + strand, within ygiL at 2045.639 kb on - strand, within ygiL at 2045.671 kb on - strand, within ygiL at 2045.749 kb on - strand, within ygiL at 2045.749 kb on - strand, within ygiL at 2045.767 kb on - strand, within ygiL at 2045.952 kb on + strand, within ygiL at 2046.242 kb on - strand at 2046.283 kb on + strand at 2046.296 kb on + strand at 2046.372 kb on + strand, within ubiK at 2046.373 kb on - strand, within ubiK at 2046.482 kb on - strand, within ubiK at 2046.511 kb on + strand, within ubiK at 2046.512 kb on - strand, within ubiK at 2046.624 kb on + strand at 2046.625 kb on - strand at 2046.641 kb on + strand at 2046.642 kb on - strand at 2046.642 kb on - strand at 2046.642 kb on - strand at 2046.660 kb on + strand at 2046.660 kb on + strand at 2046.660 kb on + strand at 2046.674 kb on + strand at 2046.674 kb on + strand at 2046.674 kb on + strand at 2046.674 kb on + strand at 2046.675 kb on - strand at 2046.675 kb on - strand at 2046.675 kb on - strand at 2046.675 kb on - strand at 2046.675 kb on - strand at 2046.682 kb on - strand at 2046.692 kb on + strand at 2046.692 kb on + strand at 2046.702 kb on + strand at 2046.702 kb on + strand at 2046.702 kb on + strand at 2046.703 kb on - strand at 2046.703 kb on - strand at 2046.931 kb on + strand at 2046.966 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECOR27 remove 2,045,454 + +2.0 2,045,515 - +0.2 2,045,531 + -0.2 2,045,572 - ygiL NOLOHH_10575 0.14 -0.1 2,045,605 - ygiL NOLOHH_10575 0.20 -0.7 2,045,608 - ygiL NOLOHH_10575 0.20 +0.5 2,045,619 + ygiL NOLOHH_10575 0.22 +1.5 2,045,619 + ygiL NOLOHH_10575 0.22 +0.9 2,045,639 - ygiL NOLOHH_10575 0.26 +0.1 2,045,671 - ygiL NOLOHH_10575 0.32 +0.5 2,045,749 - ygiL NOLOHH_10575 0.46 -0.5 2,045,749 - ygiL NOLOHH_10575 0.46 +1.1 2,045,767 - ygiL NOLOHH_10575 0.49 +1.3 2,045,952 + ygiL NOLOHH_10575 0.82 +2.7 2,046,242 - -0.3 2,046,283 + -0.1 2,046,296 + +0.9 2,046,372 + ubiK NOLOHH_10580 0.14 -2.1 2,046,373 - ubiK NOLOHH_10580 0.14 -1.1 2,046,482 - ubiK NOLOHH_10580 0.52 -0.3 2,046,511 + ubiK NOLOHH_10580 0.62 -0.3 2,046,512 - ubiK NOLOHH_10580 0.62 -0.3 2,046,624 + -1.3 2,046,625 - -1.0 2,046,641 + -0.5 2,046,642 - -0.3 2,046,642 - -0.3 2,046,642 - +0.2 2,046,660 + -1.6 2,046,660 + +0.8 2,046,660 + -0.4 2,046,674 + -1.1 2,046,674 + +0.4 2,046,674 + -1.6 2,046,674 + -0.5 2,046,675 - -1.0 2,046,675 - +0.3 2,046,675 - -0.2 2,046,675 - +0.7 2,046,675 - -1.3 2,046,682 - +0.7 2,046,692 + -1.7 2,046,692 + +0.1 2,046,702 + -0.9 2,046,702 + +0.7 2,046,702 + -0.9 2,046,703 - -0.6 2,046,703 - -0.3 2,046,931 + -0.9 2,046,966 - +0.7
Or see this region's nucleotide sequence