Strain Fitness in Escherichia coli ECOR27 around NOLOHH_09645

Experiment: Control_ECOR27

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Control_ECOR27
1,857,116	+	dcuC	NOLOHH_09640	0.58	-0.7
1,857,117	-	dcuC	NOLOHH_09640	0.58	-0.7
1,857,117	-	dcuC	NOLOHH_09640	0.58	-0.4
1,857,117	-	dcuC	NOLOHH_09640	0.58	+1.0
1,857,230	-	dcuC	NOLOHH_09640	0.66	+1.1
1,857,256	+	dcuC	NOLOHH_09640	0.68	+1.2
1,857,276	+	dcuC	NOLOHH_09640	0.70	-0.6
1,857,277	-	dcuC	NOLOHH_09640	0.70	+0.9
1,857,277	-	dcuC	NOLOHH_09640	0.70	+0.4
1,857,277	-	dcuC	NOLOHH_09640	0.70	+0.6
1,857,298	-	dcuC	NOLOHH_09640	0.71	-0.3
1,857,329	+	dcuC	NOLOHH_09640	0.74	+1.3
1,857,329	+	dcuC	NOLOHH_09640	0.74	+1.4
1,857,330	-	dcuC	NOLOHH_09640	0.74	-1.1
1,857,330	-	dcuC	NOLOHH_09640	0.74	-1.2
1,857,330	-	dcuC	NOLOHH_09640	0.74	-1.3
1,857,330	-	dcuC	NOLOHH_09640	0.74	+0.3
1,857,348	+	dcuC	NOLOHH_09640	0.75	-1.1
1,857,349	-	dcuC	NOLOHH_09640	0.75	+0.7
1,857,349	-	dcuC	NOLOHH_09640	0.75	+0.5
1,857,349	-	dcuC	NOLOHH_09640	0.75	+0.6
1,857,350	+	dcuC	NOLOHH_09640	0.75	+0.7
1,857,350	+	dcuC	NOLOHH_09640	0.75	-0.7
1,857,351	-	dcuC	NOLOHH_09640	0.75	-0.4
1,857,351	-	dcuC	NOLOHH_09640	0.75	+0.1
1,857,351	-	dcuC	NOLOHH_09640	0.75	+0.3
1,857,351	-	dcuC	NOLOHH_09640	0.75	+0.4
1,857,426	-	dcuC	NOLOHH_09640	0.81	+0.1
1,857,506	+	dcuC	NOLOHH_09640	0.86	-0.3
1,857,506	+	dcuC	NOLOHH_09640	0.86	-0.0
1,857,507	-	dcuC	NOLOHH_09640	0.87	+0.4
1,857,507	-	dcuC	NOLOHH_09640	0.87	+0.7
1,857,510	+	dcuC	NOLOHH_09640	0.87	-1.6
1,857,511	-	dcuC	NOLOHH_09640	0.87	-0.5
1,857,550	+	dcuC	NOLOHH_09640	0.90	-1.6
1,857,551	-	dcuC	NOLOHH_09640	0.90	-0.3
1,857,655	-				+0.6
1,857,662	-				-0.1
1,857,675	+				+0.7
1,857,676	-				-1.9
1,857,772	+				-0.7
1,857,772	+				+0.4
1,857,929	+				-1.1
1,857,935	-				+1.4
1,858,029	+				-0.5
1,858,078	+				-0.4
1,858,078	+				-1.1
1,858,139	-				+1.7
1,858,233	+	nanR	NOLOHH_09645	0.21	+0.1
1,858,305	+	nanR	NOLOHH_09645	0.30	+0.3
1,858,330	-	nanR	NOLOHH_09645	0.33	-0.6
1,858,330	-	nanR	NOLOHH_09645	0.33	+0.7
1,858,375	+	nanR	NOLOHH_09645	0.39	-0.3
1,858,449	+	nanR	NOLOHH_09645	0.48	-0.6
1,858,449	+	nanR	NOLOHH_09645	0.48	-0.6
1,858,450	-	nanR	NOLOHH_09645	0.48	-0.9
1,858,450	-	nanR	NOLOHH_09645	0.48	-0.3
1,858,711	+	nanR	NOLOHH_09645	0.81	-0.7
1,858,735	+	nanR	NOLOHH_09645	0.84	+0.7
1,858,735	+	nanR	NOLOHH_09645	0.84	+3.0
1,858,860	-				-0.9
1,858,860	-				+0.7
1,858,860	-				+0.1
1,858,870	+				+0.1
1,858,889	-				-0.1
1,858,890	+				+2.3
1,858,890	+				-0.9
1,858,891	-				+0.2
1,858,902	-				-1.0
1,858,915	+				+0.9
1,858,915	+				+1.4
1,858,915	+				-0.8
1,858,916	-				+0.7
1,858,916	-				-0.7
1,858,927	+				+0.7
1,858,936	+				-0.1
1,858,938	+				-0.3
1,858,939	-				+0.0
1,858,945	-				+0.9
1,858,978	+				-0.6
1,858,978	+				-0.2
1,858,978	+				+2.3
1,858,978	+				-0.3
1,858,979	-				-2.6
1,858,982	+				-0.1
1,858,982	+				-0.9
1,858,982	+				+0.9
1,858,983	-				+0.3
1,858,997	-				-0.3
1,859,084	+	nanA	NOLOHH_09650	0.11	-0.5
1,859,108	-	nanA	NOLOHH_09650	0.14	+0.4
1,859,109	+	nanA	NOLOHH_09650	0.14	-2.3
1,859,110	-	nanA	NOLOHH_09650	0.14	-1.3
1,859,110	-	nanA	NOLOHH_09650	0.14	-0.2
1,859,140	+	nanA	NOLOHH_09650	0.18	+0.7
1,859,140	+	nanA	NOLOHH_09650	0.18	-1.0
1,859,140	+	nanA	NOLOHH_09650	0.18	-1.2
1,859,140	+	nanA	NOLOHH_09650	0.18	-0.4
1,859,141	-	nanA	NOLOHH_09650	0.18	-0.3
1,859,141	-	nanA	NOLOHH_09650	0.18	-0.3
1,859,204	+	nanA	NOLOHH_09650	0.25	+1.0
1,859,205	-	nanA	NOLOHH_09650	0.25	-0.5
1,859,268	-	nanA	NOLOHH_09650	0.32	-0.7
1,859,310	+	nanA	NOLOHH_09650	0.37	-1.3
1,859,310	+	nanA	NOLOHH_09650	0.37	-1.9
1,859,311	-	nanA	NOLOHH_09650	0.37	+0.1
1,859,313	+	nanA	NOLOHH_09650	0.37	-0.9
1,859,357	+	nanA	NOLOHH_09650	0.42	+0.1
1,859,358	-	nanA	NOLOHH_09650	0.42	-0.5
1,859,391	+	nanA	NOLOHH_09650	0.46	-1.2
1,859,391	+	nanA	NOLOHH_09650	0.46	-0.3
1,859,391	+	nanA	NOLOHH_09650	0.46	-0.8
1,859,392	-	nanA	NOLOHH_09650	0.46	+1.0
1,859,392	-	nanA	NOLOHH_09650	0.46	+0.5
1,859,450	+	nanA	NOLOHH_09650	0.52	-0.3
1,859,450	+	nanA	NOLOHH_09650	0.52	+0.0
1,859,450	+	nanA	NOLOHH_09650	0.52	+0.2
1,859,464	+	nanA	NOLOHH_09650	0.54	+1.1
1,859,541	+	nanA	NOLOHH_09650	0.62	-0.6
1,859,541	+	nanA	NOLOHH_09650	0.62	-0.1
1,859,541	+	nanA	NOLOHH_09650	0.62	-0.6
1,859,541	+	nanA	NOLOHH_09650	0.62	-1.4
1,859,603	+	nanA	NOLOHH_09650	0.69	-0.3
1,859,606	+	nanA	NOLOHH_09650	0.70	-0.3
1,859,606	+	nanA	NOLOHH_09650	0.70	-1.2
1,859,607	-	nanA	NOLOHH_09650	0.70	+0.4
1,859,607	-	nanA	NOLOHH_09650	0.70	-1.3
1,859,610	+	nanA	NOLOHH_09650	0.70	-0.8
1,859,610	+	nanA	NOLOHH_09650	0.70	-0.9
1,859,610	+	nanA	NOLOHH_09650	0.70	-1.1
1,859,611	-	nanA	NOLOHH_09650	0.70	+1.9
1,859,611	-	nanA	NOLOHH_09650	0.70	-0.6
1,859,611	-	nanA	NOLOHH_09650	0.70	-0.4
1,859,611	-	nanA	NOLOHH_09650	0.70	-0.3
1,859,699	+	nanA	NOLOHH_09650	0.80	-0.3
1,859,716	+	nanA	NOLOHH_09650	0.82	-1.2
1,859,716	+	nanA	NOLOHH_09650	0.82	-0.6
1,859,763	+	nanA	NOLOHH_09650	0.87	+0.1
1,859,763	+	nanA	NOLOHH_09650	0.87	+1.1
1,859,763	+	nanA	NOLOHH_09650	0.87	-0.9
1,859,763	+	nanA	NOLOHH_09650	0.87	-0.1
1,859,764	-	nanA	NOLOHH_09650	0.87	+0.2
1,859,765	+	nanA	NOLOHH_09650	0.87	+0.5
1,859,766	-	nanA	NOLOHH_09650	0.88	+0.0
1,859,812	+				-0.1
1,859,813	-				+1.1
1,859,813	-				+1.2