Strain Fitness in Escherichia coli ECOR27 around NOLOHH_09530

Experiment: Control_ECOR27

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Control_ECOR27
1,834,143	-				+0.7
1,834,180	+				-1.2
1,834,194	-				+0.6
1,834,197	+				+0.4
1,834,198	-				-0.3
1,834,258	+	yhdE	NOLOHH_09525	0.13	+1.0
1,834,258	+	yhdE	NOLOHH_09525	0.13	+1.6
1,834,258	+	yhdE	NOLOHH_09525	0.13	-1.4
1,834,258	+	yhdE	NOLOHH_09525	0.13	-0.3
1,834,265	-	yhdE	NOLOHH_09525	0.14	-1.3
1,834,265	-	yhdE	NOLOHH_09525	0.14	-0.9
1,834,311	-	yhdE	NOLOHH_09525	0.22	-1.4
1,834,311	-	yhdE	NOLOHH_09525	0.22	+0.3
1,834,311	-	yhdE	NOLOHH_09525	0.22	-0.7
1,834,390	+	yhdE	NOLOHH_09525	0.35	+0.6
1,834,391	-	yhdE	NOLOHH_09525	0.35	+1.5
1,834,391	-	yhdE	NOLOHH_09525	0.35	+1.2
1,834,394	-	yhdE	NOLOHH_09525	0.36	+0.7
1,834,394	-	yhdE	NOLOHH_09525	0.36	+1.1
1,834,611	+	yhdE	NOLOHH_09525	0.72	+0.7
1,834,615	+	yhdE	NOLOHH_09525	0.73	+1.1
1,834,628	+	yhdE	NOLOHH_09525	0.75	+2.3
1,834,668	+	yhdE	NOLOHH_09525	0.82	+0.8
1,834,669	-	yhdE	NOLOHH_09525	0.82	+0.0
1,834,679	+	yhdE	NOLOHH_09525	0.84	+0.9
1,834,722	+				+0.7
1,834,722	+				+0.0
1,834,722	+				-0.9
1,834,815	+				-0.5
1,834,815	+				-1.3
1,834,815	+				-1.8
1,834,815	+				+0.7
1,834,884	-				+0.7
1,834,887	+				+0.7
1,834,887	+				-1.9
1,834,887	+				+0.7
1,834,887	+				+0.7
1,834,888	-				-0.0
1,834,940	+	rng	NOLOHH_09530	0.12	-0.3
1,835,268	-	rng	NOLOHH_09530	0.34	-0.9
1,835,352	-	rng	NOLOHH_09530	0.40	+0.7
1,835,360	+	rng	NOLOHH_09530	0.41	+0.7
1,835,478	+	rng	NOLOHH_09530	0.49	-1.6
1,835,478	+	rng	NOLOHH_09530	0.49	-2.0
1,835,499	-	rng	NOLOHH_09530	0.50	-0.5
1,835,509	-	rng	NOLOHH_09530	0.51	+0.7
1,835,541	+	rng	NOLOHH_09530	0.53	-1.9
1,835,542	-	rng	NOLOHH_09530	0.53	-1.6
1,835,542	-	rng	NOLOHH_09530	0.53	-1.9
1,835,614	+	rng	NOLOHH_09530	0.58	+0.7
1,835,614	+	rng	NOLOHH_09530	0.58	+2.7
1,835,635	-	rng	NOLOHH_09530	0.59	+1.7
1,835,635	-	rng	NOLOHH_09530	0.59	-0.6
1,835,635	-	rng	NOLOHH_09530	0.59	+0.7
1,835,820	-	rng	NOLOHH_09530	0.72	-0.3
1,835,962	+	rng	NOLOHH_09530	0.81	-0.3
1,835,963	-	rng	NOLOHH_09530	0.82	+0.1
1,836,066	+	rng	NOLOHH_09530	0.89	+2.7
1,836,067	-	rng	NOLOHH_09530	0.89	+0.9
1,836,090	+				-0.9
1,836,090	+				-2.1
1,836,090	+				-0.7
1,836,091	-				-0.1
1,836,091	-				-1.6
1,836,091	-				+1.7
1,836,106	+				-0.7
1,836,176	+				-1.0
1,836,181	+				-0.0
1,836,198	+				-0.2
1,836,223	+				+0.8
1,836,223	+				+0.4
1,836,223	+				+0.1
1,836,231	+				-0.3
1,836,231	+				-1.5
1,836,232	-				-1.6
1,836,232	-				+0.3
1,836,232	-				-1.6
1,836,232	-				-1.3
1,836,232	-				-0.3
1,836,324	-				-0.7
1,836,330	+				+0.2
1,836,331	-				+0.3
1,836,381	+				-0.3
1,836,431	+				+0.1
1,836,596	+				+0.2
1,836,596	+				-0.4
1,836,597	-				+0.1
1,836,597	-				-0.3
1,836,597	-				+0.7
1,836,600	+				+0.4
1,836,600	+				-1.6
1,836,600	+				+0.2
1,836,601	-				+0.7
1,836,601	-				-0.0
1,836,601	-				-1.3
1,836,660	+				-1.3
1,836,855	-	yhdP	NOLOHH_09535	0.15	+0.4
1,836,855	-	yhdP	NOLOHH_09535	0.15	+0.4
1,836,988	-	yhdP	NOLOHH_09535	0.18	-1.6
1,837,005	+	yhdP	NOLOHH_09535	0.19	-0.8
1,837,006	-	yhdP	NOLOHH_09535	0.19	-2.8
1,837,006	-	yhdP	NOLOHH_09535	0.19	-1.6
1,837,068	-	yhdP	NOLOHH_09535	0.20	+0.1
1,837,131	+	yhdP	NOLOHH_09535	0.22	-0.8
1,837,132	-	yhdP	NOLOHH_09535	0.22	+0.6
1,837,161	+	yhdP	NOLOHH_09535	0.23	-0.6
1,837,161	+	yhdP	NOLOHH_09535	0.23	-3.0
1,837,161	+	yhdP	NOLOHH_09535	0.23	-2.0
1,837,162	-	yhdP	NOLOHH_09535	0.23	+0.5
1,837,162	-	yhdP	NOLOHH_09535	0.23	+0.0
1,837,194	+	yhdP	NOLOHH_09535	0.23	-0.6
1,837,194	+	yhdP	NOLOHH_09535	0.23	+0.6