Experiment: Control_ECOR27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_08300 and NOLOHH_08305 are separated by 107 nucleotides NOLOHH_08305 and arsC are separated by 122 nucleotides arsC and arsB are separated by 12 nucleotides
NOLOHH_08300: NOLOHH_08300 - putative permease, at 1,601,103 to 1,602,116
_08300
NOLOHH_08305: NOLOHH_08305 - transcriptional regulator, at 1,602,224 to 1,602,520
_08305
NOLOHH_08310: arsC - glutaredoxin-dependent arsenate reductase, at 1,602,643 to 1,603,068
arsC
NOLOHH_08315: arsB - arsenite/antimonite:H(+) antiporter ArsB, at 1,603,081 to 1,604,370
arsB
Position (kb)
1602
1603 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1601.245 kb on - strand, within NOLOHH_08300 at 1601.245 kb on - strand, within NOLOHH_08300 at 1601.323 kb on + strand, within NOLOHH_08300 at 1601.324 kb on - strand, within NOLOHH_08300 at 1601.408 kb on + strand, within NOLOHH_08300 at 1601.420 kb on + strand, within NOLOHH_08300 at 1601.421 kb on - strand, within NOLOHH_08300 at 1601.433 kb on + strand, within NOLOHH_08300 at 1601.434 kb on - strand, within NOLOHH_08300 at 1601.460 kb on + strand, within NOLOHH_08300 at 1601.460 kb on + strand, within NOLOHH_08300 at 1601.461 kb on - strand, within NOLOHH_08300 at 1601.496 kb on + strand, within NOLOHH_08300 at 1601.503 kb on - strand, within NOLOHH_08300 at 1601.513 kb on + strand, within NOLOHH_08300 at 1601.513 kb on + strand, within NOLOHH_08300 at 1601.513 kb on + strand, within NOLOHH_08300 at 1601.513 kb on + strand, within NOLOHH_08300 at 1601.513 kb on + strand, within NOLOHH_08300 at 1601.579 kb on + strand, within NOLOHH_08300 at 1601.596 kb on - strand, within NOLOHH_08300 at 1601.603 kb on + strand, within NOLOHH_08300 at 1601.603 kb on + strand, within NOLOHH_08300 at 1601.603 kb on + strand, within NOLOHH_08300 at 1601.603 kb on + strand, within NOLOHH_08300 at 1601.603 kb on + strand, within NOLOHH_08300 at 1601.603 kb on + strand, within NOLOHH_08300 at 1601.604 kb on - strand, within NOLOHH_08300 at 1601.604 kb on - strand, within NOLOHH_08300 at 1601.604 kb on - strand, within NOLOHH_08300 at 1601.604 kb on - strand, within NOLOHH_08300 at 1601.604 kb on - strand, within NOLOHH_08300 at 1601.604 kb on - strand, within NOLOHH_08300 at 1601.604 kb on - strand, within NOLOHH_08300 at 1601.605 kb on + strand, within NOLOHH_08300 at 1601.605 kb on + strand, within NOLOHH_08300 at 1601.605 kb on + strand, within NOLOHH_08300 at 1601.606 kb on - strand, within NOLOHH_08300 at 1601.606 kb on - strand, within NOLOHH_08300 at 1601.606 kb on - strand, within NOLOHH_08300 at 1601.684 kb on + strand, within NOLOHH_08300 at 1601.755 kb on + strand, within NOLOHH_08300 at 1601.794 kb on - strand, within NOLOHH_08300 at 1601.794 kb on - strand, within NOLOHH_08300 at 1601.794 kb on - strand, within NOLOHH_08300 at 1601.813 kb on + strand, within NOLOHH_08300 at 1601.813 kb on + strand, within NOLOHH_08300 at 1601.814 kb on - strand, within NOLOHH_08300 at 1601.817 kb on + strand, within NOLOHH_08300 at 1601.817 kb on + strand, within NOLOHH_08300 at 1601.817 kb on + strand, within NOLOHH_08300 at 1601.833 kb on - strand, within NOLOHH_08300 at 1601.883 kb on + strand, within NOLOHH_08300 at 1601.883 kb on + strand, within NOLOHH_08300 at 1601.884 kb on - strand, within NOLOHH_08300 at 1601.884 kb on - strand, within NOLOHH_08300 at 1601.906 kb on + strand, within NOLOHH_08300 at 1601.947 kb on + strand, within NOLOHH_08300 at 1601.987 kb on + strand, within NOLOHH_08300 at 1602.038 kb on + strand at 1602.038 kb on + strand at 1602.038 kb on + strand at 1602.038 kb on + strand at 1602.110 kb on + strand at 1602.110 kb on + strand at 1602.110 kb on + strand at 1602.110 kb on + strand at 1602.111 kb on - strand at 1602.111 kb on - strand at 1602.111 kb on - strand at 1602.111 kb on - strand at 1602.116 kb on + strand at 1602.116 kb on + strand at 1602.116 kb on + strand at 1602.116 kb on + strand at 1602.120 kb on + strand at 1602.120 kb on + strand at 1602.120 kb on + strand at 1602.121 kb on - strand at 1602.223 kb on + strand at 1602.223 kb on + strand at 1602.223 kb on + strand at 1602.224 kb on - strand at 1602.224 kb on - strand at 1602.224 kb on - strand at 1602.224 kb on - strand at 1602.224 kb on - strand at 1602.224 kb on - strand at 1602.244 kb on + strand at 1602.262 kb on - strand, within NOLOHH_08305 at 1602.285 kb on + strand, within NOLOHH_08305 at 1602.364 kb on + strand, within NOLOHH_08305 at 1602.364 kb on + strand, within NOLOHH_08305 at 1602.379 kb on + strand, within NOLOHH_08305 at 1602.380 kb on - strand, within NOLOHH_08305 at 1602.394 kb on - strand, within NOLOHH_08305 at 1602.453 kb on - strand, within NOLOHH_08305 at 1602.501 kb on + strand at 1602.501 kb on + strand at 1602.501 kb on + strand at 1602.501 kb on + strand at 1602.501 kb on + strand at 1602.502 kb on - strand at 1602.502 kb on - strand at 1602.502 kb on - strand at 1602.502 kb on - strand at 1602.561 kb on + strand at 1602.598 kb on - strand at 1602.620 kb on + strand at 1602.620 kb on + strand at 1602.620 kb on + strand at 1602.841 kb on - strand, within arsC at 1602.847 kb on - strand, within arsC at 1602.872 kb on + strand, within arsC at 1602.889 kb on - strand, within arsC at 1602.889 kb on - strand, within arsC at 1602.969 kb on - strand, within arsC at 1602.969 kb on - strand, within arsC at 1602.971 kb on + strand, within arsC at 1602.971 kb on + strand, within arsC at 1602.971 kb on + strand, within arsC at 1602.971 kb on + strand, within arsC at 1602.972 kb on - strand, within arsC at 1602.972 kb on - strand, within arsC at 1602.972 kb on - strand, within arsC at 1602.972 kb on - strand, within arsC at 1602.976 kb on - strand, within arsC at 1602.976 kb on - strand, within arsC at 1603.018 kb on - strand, within arsC at 1603.018 kb on - strand, within arsC at 1603.021 kb on - strand, within arsC at 1603.029 kb on + strand at 1603.029 kb on + strand at 1603.030 kb on - strand at 1603.030 kb on - strand at 1603.050 kb on - strand at 1603.056 kb on + strand at 1603.069 kb on - strand at 1603.069 kb on - strand at 1603.074 kb on + strand at 1603.075 kb on - strand at 1603.075 kb on - strand at 1603.075 kb on - strand at 1603.075 kb on - strand at 1603.075 kb on - strand at 1603.082 kb on + strand at 1603.083 kb on - strand at 1603.083 kb on - strand at 1603.102 kb on + strand at 1603.149 kb on + strand at 1603.150 kb on - strand at 1603.150 kb on - strand at 1603.150 kb on - strand at 1603.166 kb on + strand at 1603.166 kb on + strand at 1603.166 kb on + strand at 1603.166 kb on + strand at 1603.167 kb on - strand at 1603.167 kb on - strand at 1603.182 kb on + strand at 1603.182 kb on + strand at 1603.182 kb on + strand at 1603.182 kb on + strand at 1603.183 kb on - strand at 1603.188 kb on + strand at 1603.188 kb on + strand at 1603.189 kb on - strand at 1603.189 kb on - strand at 1603.189 kb on - strand at 1603.204 kb on + strand at 1603.284 kb on - strand, within arsB at 1603.349 kb on - strand, within arsB at 1603.360 kb on - strand, within arsB at 1603.368 kb on + strand, within arsB at 1603.369 kb on - strand, within arsB at 1603.371 kb on + strand, within arsB at 1603.371 kb on + strand, within arsB at 1603.371 kb on + strand, within arsB at 1603.372 kb on - strand, within arsB at 1603.372 kb on - strand, within arsB at 1603.372 kb on - strand, within arsB at 1603.372 kb on - strand, within arsB at 1603.372 kb on - strand, within arsB at 1603.447 kb on + strand, within arsB at 1603.448 kb on - strand, within arsB at 1603.448 kb on - strand, within arsB at 1603.460 kb on + strand, within arsB at 1603.461 kb on - strand, within arsB at 1603.461 kb on - strand, within arsB at 1603.502 kb on + strand, within arsB at 1603.502 kb on + strand, within arsB at 1603.503 kb on - strand, within arsB at 1603.503 kb on - strand, within arsB at 1603.503 kb on - strand, within arsB at 1603.503 kb on - strand, within arsB at 1603.503 kb on - strand, within arsB at 1603.503 kb on - strand, within arsB at 1603.503 kb on - strand, within arsB at 1603.503 kb on - strand, within arsB
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECOR27 remove 1,601,245 - NOLOHH_08300 0.14 +0.5 1,601,245 - NOLOHH_08300 0.14 +0.5 1,601,323 + NOLOHH_08300 0.22 -0.3 1,601,324 - NOLOHH_08300 0.22 -1.4 1,601,408 + NOLOHH_08300 0.30 -0.7 1,601,420 + NOLOHH_08300 0.31 +0.3 1,601,421 - NOLOHH_08300 0.31 +0.5 1,601,433 + NOLOHH_08300 0.33 +0.7 1,601,434 - NOLOHH_08300 0.33 -0.2 1,601,460 + NOLOHH_08300 0.35 -0.3 1,601,460 + NOLOHH_08300 0.35 +0.1 1,601,461 - NOLOHH_08300 0.35 -1.0 1,601,496 + NOLOHH_08300 0.39 -0.4 1,601,503 - NOLOHH_08300 0.39 -0.6 1,601,513 + NOLOHH_08300 0.40 +0.2 1,601,513 + NOLOHH_08300 0.40 +0.8 1,601,513 + NOLOHH_08300 0.40 +0.1 1,601,513 + NOLOHH_08300 0.40 +1.3 1,601,513 + NOLOHH_08300 0.40 -0.9 1,601,579 + NOLOHH_08300 0.47 -2.5 1,601,596 - NOLOHH_08300 0.49 +1.4 1,601,603 + NOLOHH_08300 0.49 -0.3 1,601,603 + NOLOHH_08300 0.49 +0.5 1,601,603 + NOLOHH_08300 0.49 +0.1 1,601,603 + NOLOHH_08300 0.49 -0.0 1,601,603 + NOLOHH_08300 0.49 -0.2 1,601,603 + NOLOHH_08300 0.49 +0.5 1,601,604 - NOLOHH_08300 0.49 -0.1 1,601,604 - NOLOHH_08300 0.49 +0.9 1,601,604 - NOLOHH_08300 0.49 -2.1 1,601,604 - NOLOHH_08300 0.49 +0.2 1,601,604 - NOLOHH_08300 0.49 +0.2 1,601,604 - NOLOHH_08300 0.49 +0.4 1,601,604 - NOLOHH_08300 0.49 -0.5 1,601,605 + NOLOHH_08300 0.50 +0.8 1,601,605 + NOLOHH_08300 0.50 -2.6 1,601,605 + NOLOHH_08300 0.50 +1.0 1,601,606 - NOLOHH_08300 0.50 -0.4 1,601,606 - NOLOHH_08300 0.50 +0.0 1,601,606 - NOLOHH_08300 0.50 +0.1 1,601,684 + NOLOHH_08300 0.57 +0.6 1,601,755 + NOLOHH_08300 0.64 +0.0 1,601,794 - NOLOHH_08300 0.68 +0.7 1,601,794 - NOLOHH_08300 0.68 -2.3 1,601,794 - NOLOHH_08300 0.68 -0.7 1,601,813 + NOLOHH_08300 0.70 +0.8 1,601,813 + NOLOHH_08300 0.70 -0.4 1,601,814 - NOLOHH_08300 0.70 -1.3 1,601,817 + NOLOHH_08300 0.70 +0.5 1,601,817 + NOLOHH_08300 0.70 -0.5 1,601,817 + NOLOHH_08300 0.70 -0.6 1,601,833 - NOLOHH_08300 0.72 -0.1 1,601,883 + NOLOHH_08300 0.77 +0.4 1,601,883 + NOLOHH_08300 0.77 -1.0 1,601,884 - NOLOHH_08300 0.77 -0.7 1,601,884 - NOLOHH_08300 0.77 -0.0 1,601,906 + NOLOHH_08300 0.79 +1.3 1,601,947 + NOLOHH_08300 0.83 -0.0 1,601,987 + NOLOHH_08300 0.87 -0.3 1,602,038 + +0.4 1,602,038 + -1.0 1,602,038 + -1.2 1,602,038 + +0.8 1,602,110 + -0.7 1,602,110 + +0.5 1,602,110 + +0.7 1,602,110 + -0.1 1,602,111 - -0.2 1,602,111 - -0.3 1,602,111 - -0.8 1,602,111 - +0.7 1,602,116 + +1.0 1,602,116 + +0.3 1,602,116 + -0.5 1,602,116 + +0.4 1,602,120 + -1.3 1,602,120 + -0.1 1,602,120 + +0.1 1,602,121 - +0.1 1,602,223 + -0.6 1,602,223 + +0.5 1,602,223 + +0.4 1,602,224 - +0.7 1,602,224 - -2.1 1,602,224 - -1.8 1,602,224 - +1.0 1,602,224 - -0.0 1,602,224 - +0.2 1,602,244 + +1.2 1,602,262 - NOLOHH_08305 0.13 -0.9 1,602,285 + NOLOHH_08305 0.21 -1.4 1,602,364 + NOLOHH_08305 0.47 -2.3 1,602,364 + NOLOHH_08305 0.47 -0.0 1,602,379 + NOLOHH_08305 0.52 -1.3 1,602,380 - NOLOHH_08305 0.53 +1.4 1,602,394 - NOLOHH_08305 0.57 -0.3 1,602,453 - NOLOHH_08305 0.77 -0.3 1,602,501 + +0.4 1,602,501 + -0.5 1,602,501 + +0.2 1,602,501 + +1.3 1,602,501 + -0.6 1,602,502 - -0.3 1,602,502 - +1.1 1,602,502 - -0.5 1,602,502 - +0.7 1,602,561 + -0.5 1,602,598 - +0.7 1,602,620 + +0.4 1,602,620 + -0.1 1,602,620 + -0.4 1,602,841 - arsC NOLOHH_08310 0.46 +0.1 1,602,847 - arsC NOLOHH_08310 0.48 -0.4 1,602,872 + arsC NOLOHH_08310 0.54 -0.7 1,602,889 - arsC NOLOHH_08310 0.58 +0.7 1,602,889 - arsC NOLOHH_08310 0.58 -0.4 1,602,969 - arsC NOLOHH_08310 0.77 -0.5 1,602,969 - arsC NOLOHH_08310 0.77 +2.7 1,602,971 + arsC NOLOHH_08310 0.77 +0.1 1,602,971 + arsC NOLOHH_08310 0.77 -0.3 1,602,971 + arsC NOLOHH_08310 0.77 +0.1 1,602,971 + arsC NOLOHH_08310 0.77 +0.6 1,602,972 - arsC NOLOHH_08310 0.77 -0.1 1,602,972 - arsC NOLOHH_08310 0.77 +2.3 1,602,972 - arsC NOLOHH_08310 0.77 -0.0 1,602,972 - arsC NOLOHH_08310 0.77 -0.4 1,602,976 - arsC NOLOHH_08310 0.78 -1.1 1,602,976 - arsC NOLOHH_08310 0.78 -0.4 1,603,018 - arsC NOLOHH_08310 0.88 +1.7 1,603,018 - arsC NOLOHH_08310 0.88 -0.4 1,603,021 - arsC NOLOHH_08310 0.89 +1.2 1,603,029 + -0.7 1,603,029 + -0.9 1,603,030 - -0.1 1,603,030 - -2.3 1,603,050 - -0.2 1,603,056 + -0.7 1,603,069 - +0.1 1,603,069 - +0.7 1,603,074 + +0.4 1,603,075 - -3.4 1,603,075 - +2.3 1,603,075 - +2.0 1,603,075 - -0.2 1,603,075 - +0.0 1,603,082 + -0.7 1,603,083 - -0.7 1,603,083 - -0.0 1,603,102 + -0.2 1,603,149 + -1.9 1,603,150 - -0.3 1,603,150 - +0.2 1,603,150 - -1.8 1,603,166 + +0.1 1,603,166 + -1.2 1,603,166 + -0.1 1,603,166 + -1.2 1,603,167 - -2.0 1,603,167 - -1.0 1,603,182 + +0.4 1,603,182 + -0.0 1,603,182 + +0.1 1,603,182 + -0.1 1,603,183 - +0.4 1,603,188 + +0.0 1,603,188 + -1.0 1,603,189 - -0.7 1,603,189 - +0.7 1,603,189 - +1.7 1,603,204 + +0.7 1,603,284 - arsB NOLOHH_08315 0.16 +1.5 1,603,349 - arsB NOLOHH_08315 0.21 +0.2 1,603,360 - arsB NOLOHH_08315 0.22 +2.0 1,603,368 + arsB NOLOHH_08315 0.22 +1.2 1,603,369 - arsB NOLOHH_08315 0.22 -0.3 1,603,371 + arsB NOLOHH_08315 0.22 -2.1 1,603,371 + arsB NOLOHH_08315 0.22 +1.2 1,603,371 + arsB NOLOHH_08315 0.22 +0.6 1,603,372 - arsB NOLOHH_08315 0.23 -1.2 1,603,372 - arsB NOLOHH_08315 0.23 +1.1 1,603,372 - arsB NOLOHH_08315 0.23 +1.0 1,603,372 - arsB NOLOHH_08315 0.23 +1.1 1,603,372 - arsB NOLOHH_08315 0.23 -0.5 1,603,447 + arsB NOLOHH_08315 0.28 +0.2 1,603,448 - arsB NOLOHH_08315 0.28 +0.4 1,603,448 - arsB NOLOHH_08315 0.28 +0.7 1,603,460 + arsB NOLOHH_08315 0.29 -0.3 1,603,461 - arsB NOLOHH_08315 0.29 +0.3 1,603,461 - arsB NOLOHH_08315 0.29 -0.0 1,603,502 + arsB NOLOHH_08315 0.33 -0.1 1,603,502 + arsB NOLOHH_08315 0.33 +0.2 1,603,503 - arsB NOLOHH_08315 0.33 -0.3 1,603,503 - arsB NOLOHH_08315 0.33 +0.5 1,603,503 - arsB NOLOHH_08315 0.33 -1.3 1,603,503 - arsB NOLOHH_08315 0.33 +0.4 1,603,503 - arsB NOLOHH_08315 0.33 -1.4 1,603,503 - arsB NOLOHH_08315 0.33 +0.0 1,603,503 - arsB NOLOHH_08315 0.33 +0.3 1,603,503 - arsB NOLOHH_08315 0.33 +0.5
Or see this region's nucleotide sequence