Experiment: Control_ECOR27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yihO and ompL are separated by 67 nucleotides ompL and yihN are separated by 90 nucleotides
NOLOHH_06190: yihO - Putative sulfoquinovose importer, at 1,165,573 to 1,166,976
yihO
NOLOHH_06195: ompL - porin OmpL, at 1,167,044 to 1,167,736
ompL
NOLOHH_06200: yihN - Inner membrane protein YihN, at 1,167,827 to 1,169,092
yihN
Position (kb) 1167
1168 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1166.063 kb on + strand, within yihO at 1166.064 kb on - strand, within yihO at 1166.069 kb on + strand, within yihO at 1166.092 kb on - strand, within yihO at 1166.132 kb on - strand, within yihO at 1166.148 kb on + strand, within yihO at 1166.148 kb on + strand, within yihO at 1166.148 kb on + strand, within yihO at 1166.149 kb on - strand, within yihO at 1166.149 kb on - strand, within yihO at 1166.149 kb on - strand, within yihO at 1166.149 kb on - strand, within yihO at 1166.189 kb on - strand, within yihO at 1166.209 kb on + strand, within yihO at 1166.209 kb on + strand, within yihO at 1166.235 kb on + strand, within yihO at 1166.313 kb on + strand, within yihO at 1166.314 kb on - strand, within yihO at 1166.329 kb on - strand, within yihO at 1166.329 kb on - strand, within yihO at 1166.357 kb on - strand, within yihO at 1166.519 kb on + strand, within yihO at 1166.519 kb on + strand, within yihO at 1166.520 kb on - strand, within yihO at 1166.520 kb on - strand, within yihO at 1166.520 kb on - strand, within yihO at 1166.542 kb on - strand, within yihO at 1166.597 kb on + strand, within yihO at 1166.634 kb on - strand, within yihO at 1166.680 kb on + strand, within yihO at 1166.681 kb on - strand, within yihO at 1166.742 kb on + strand, within yihO at 1166.743 kb on - strand, within yihO at 1166.761 kb on + strand, within yihO at 1166.845 kb on - strand at 1166.872 kb on + strand at 1167.041 kb on - strand at 1167.133 kb on + strand, within ompL at 1167.165 kb on + strand, within ompL at 1167.166 kb on - strand, within ompL at 1167.166 kb on - strand, within ompL at 1167.200 kb on - strand, within ompL at 1167.214 kb on + strand, within ompL at 1167.214 kb on + strand, within ompL at 1167.427 kb on + strand, within ompL at 1167.545 kb on + strand, within ompL at 1167.571 kb on + strand, within ompL at 1167.626 kb on - strand, within ompL at 1167.725 kb on + strand at 1167.725 kb on + strand at 1167.759 kb on + strand at 1167.759 kb on + strand at 1167.824 kb on + strand at 1167.825 kb on - strand at 1167.856 kb on + strand at 1167.856 kb on + strand at 1167.857 kb on - strand at 1167.869 kb on - strand at 1167.884 kb on + strand at 1167.976 kb on - strand, within yihN at 1168.025 kb on - strand, within yihN at 1168.106 kb on - strand, within yihN at 1168.132 kb on + strand, within yihN at 1168.132 kb on + strand, within yihN at 1168.132 kb on + strand, within yihN at 1168.132 kb on + strand, within yihN at 1168.133 kb on - strand, within yihN at 1168.133 kb on - strand, within yihN at 1168.133 kb on - strand, within yihN at 1168.187 kb on + strand, within yihN at 1168.211 kb on - strand, within yihN at 1168.219 kb on - strand, within yihN at 1168.228 kb on - strand, within yihN at 1168.232 kb on - strand, within yihN at 1168.253 kb on - strand, within yihN at 1168.306 kb on + strand, within yihN at 1168.307 kb on - strand, within yihN at 1168.318 kb on - strand, within yihN at 1168.343 kb on + strand, within yihN at 1168.343 kb on + strand, within yihN at 1168.343 kb on + strand, within yihN at 1168.344 kb on - strand, within yihN at 1168.347 kb on + strand, within yihN at 1168.347 kb on + strand, within yihN at 1168.347 kb on + strand, within yihN at 1168.347 kb on + strand, within yihN at 1168.347 kb on + strand, within yihN at 1168.348 kb on - strand, within yihN at 1168.348 kb on - strand, within yihN at 1168.348 kb on - strand, within yihN at 1168.348 kb on - strand, within yihN at 1168.348 kb on - strand, within yihN at 1168.390 kb on - strand, within yihN at 1168.390 kb on - strand, within yihN at 1168.423 kb on + strand, within yihN at 1168.432 kb on + strand, within yihN at 1168.459 kb on + strand, within yihN at 1168.543 kb on + strand, within yihN at 1168.621 kb on + strand, within yihN at 1168.621 kb on + strand, within yihN at 1168.622 kb on - strand, within yihN at 1168.622 kb on - strand, within yihN at 1168.625 kb on + strand, within yihN at 1168.626 kb on - strand, within yihN
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECOR27 remove 1,166,063 + yihO NOLOHH_06190 0.35 -0.2 1,166,064 - yihO NOLOHH_06190 0.35 +0.6 1,166,069 + yihO NOLOHH_06190 0.35 -1.1 1,166,092 - yihO NOLOHH_06190 0.37 -0.2 1,166,132 - yihO NOLOHH_06190 0.40 +0.2 1,166,148 + yihO NOLOHH_06190 0.41 -1.4 1,166,148 + yihO NOLOHH_06190 0.41 -0.3 1,166,148 + yihO NOLOHH_06190 0.41 +1.7 1,166,149 - yihO NOLOHH_06190 0.41 +2.3 1,166,149 - yihO NOLOHH_06190 0.41 +0.7 1,166,149 - yihO NOLOHH_06190 0.41 +0.7 1,166,149 - yihO NOLOHH_06190 0.41 +1.0 1,166,189 - yihO NOLOHH_06190 0.44 -1.1 1,166,209 + yihO NOLOHH_06190 0.45 +0.5 1,166,209 + yihO NOLOHH_06190 0.45 -0.1 1,166,235 + yihO NOLOHH_06190 0.47 +1.0 1,166,313 + yihO NOLOHH_06190 0.53 +0.9 1,166,314 - yihO NOLOHH_06190 0.53 -1.6 1,166,329 - yihO NOLOHH_06190 0.54 +0.4 1,166,329 - yihO NOLOHH_06190 0.54 +1.0 1,166,357 - yihO NOLOHH_06190 0.56 +0.2 1,166,519 + yihO NOLOHH_06190 0.67 +0.2 1,166,519 + yihO NOLOHH_06190 0.67 +0.4 1,166,520 - yihO NOLOHH_06190 0.67 -0.5 1,166,520 - yihO NOLOHH_06190 0.67 +0.3 1,166,520 - yihO NOLOHH_06190 0.67 -1.4 1,166,542 - yihO NOLOHH_06190 0.69 -0.5 1,166,597 + yihO NOLOHH_06190 0.73 +0.3 1,166,634 - yihO NOLOHH_06190 0.76 -1.8 1,166,680 + yihO NOLOHH_06190 0.79 -0.8 1,166,681 - yihO NOLOHH_06190 0.79 -1.6 1,166,742 + yihO NOLOHH_06190 0.83 +0.7 1,166,743 - yihO NOLOHH_06190 0.83 -0.2 1,166,761 + yihO NOLOHH_06190 0.85 -0.3 1,166,845 - -0.6 1,166,872 + +1.1 1,167,041 - -0.6 1,167,133 + ompL NOLOHH_06195 0.13 +0.4 1,167,165 + ompL NOLOHH_06195 0.17 -1.8 1,167,166 - ompL NOLOHH_06195 0.18 +0.2 1,167,166 - ompL NOLOHH_06195 0.18 -0.7 1,167,200 - ompL NOLOHH_06195 0.23 +0.8 1,167,214 + ompL NOLOHH_06195 0.25 +0.0 1,167,214 + ompL NOLOHH_06195 0.25 -1.8 1,167,427 + ompL NOLOHH_06195 0.55 -1.8 1,167,545 + ompL NOLOHH_06195 0.72 +0.8 1,167,571 + ompL NOLOHH_06195 0.76 -0.5 1,167,626 - ompL NOLOHH_06195 0.84 -0.6 1,167,725 + -0.6 1,167,725 + +0.4 1,167,759 + +0.2 1,167,759 + +0.3 1,167,824 + +1.9 1,167,825 - +1.0 1,167,856 + -0.0 1,167,856 + +1.6 1,167,857 - -0.5 1,167,869 - +1.2 1,167,884 + -1.3 1,167,976 - yihN NOLOHH_06200 0.12 +0.3 1,168,025 - yihN NOLOHH_06200 0.16 -0.3 1,168,106 - yihN NOLOHH_06200 0.22 -1.1 1,168,132 + yihN NOLOHH_06200 0.24 +0.1 1,168,132 + yihN NOLOHH_06200 0.24 -0.2 1,168,132 + yihN NOLOHH_06200 0.24 -0.3 1,168,132 + yihN NOLOHH_06200 0.24 +0.7 1,168,133 - yihN NOLOHH_06200 0.24 +1.7 1,168,133 - yihN NOLOHH_06200 0.24 -0.9 1,168,133 - yihN NOLOHH_06200 0.24 -0.9 1,168,187 + yihN NOLOHH_06200 0.28 -2.1 1,168,211 - yihN NOLOHH_06200 0.30 -0.6 1,168,219 - yihN NOLOHH_06200 0.31 +0.3 1,168,228 - yihN NOLOHH_06200 0.32 -0.2 1,168,232 - yihN NOLOHH_06200 0.32 +0.7 1,168,253 - yihN NOLOHH_06200 0.34 +1.0 1,168,306 + yihN NOLOHH_06200 0.38 +0.3 1,168,307 - yihN NOLOHH_06200 0.38 +0.5 1,168,318 - yihN NOLOHH_06200 0.39 +1.1 1,168,343 + yihN NOLOHH_06200 0.41 -0.9 1,168,343 + yihN NOLOHH_06200 0.41 -0.6 1,168,343 + yihN NOLOHH_06200 0.41 +0.7 1,168,344 - yihN NOLOHH_06200 0.41 -0.2 1,168,347 + yihN NOLOHH_06200 0.41 +0.7 1,168,347 + yihN NOLOHH_06200 0.41 +1.1 1,168,347 + yihN NOLOHH_06200 0.41 -0.8 1,168,347 + yihN NOLOHH_06200 0.41 +0.0 1,168,347 + yihN NOLOHH_06200 0.41 +0.4 1,168,348 - yihN NOLOHH_06200 0.41 +1.3 1,168,348 - yihN NOLOHH_06200 0.41 +0.0 1,168,348 - yihN NOLOHH_06200 0.41 +0.2 1,168,348 - yihN NOLOHH_06200 0.41 -1.3 1,168,348 - yihN NOLOHH_06200 0.41 +2.0 1,168,390 - yihN NOLOHH_06200 0.44 +0.2 1,168,390 - yihN NOLOHH_06200 0.44 +0.6 1,168,423 + yihN NOLOHH_06200 0.47 -0.6 1,168,432 + yihN NOLOHH_06200 0.48 -0.3 1,168,459 + yihN NOLOHH_06200 0.50 +0.4 1,168,543 + yihN NOLOHH_06200 0.57 -1.0 1,168,621 + yihN NOLOHH_06200 0.63 +0.0 1,168,621 + yihN NOLOHH_06200 0.63 +1.5 1,168,622 - yihN NOLOHH_06200 0.63 +0.1 1,168,622 - yihN NOLOHH_06200 0.63 +1.3 1,168,625 + yihN NOLOHH_06200 0.63 +0.7 1,168,626 - yihN NOLOHH_06200 0.63 +0.5
Or see this region's nucleotide sequence