Strain Fitness in Escherichia coli ECOR27 around NOLOHH_05930

Experiment: Control_ECOR27

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Control_ECOR27
1,114,468	+	fpr	NOLOHH_05920	0.30	+0.2
1,114,469	-	fpr	NOLOHH_05920	0.30	+0.9
1,114,469	-	fpr	NOLOHH_05920	0.30	-0.4
1,114,552	+	fpr	NOLOHH_05920	0.41	-1.6
1,114,553	-	fpr	NOLOHH_05920	0.41	-1.9
1,114,605	+	fpr	NOLOHH_05920	0.48	+1.4
1,114,606	-	fpr	NOLOHH_05920	0.48	-0.8
1,114,606	-	fpr	NOLOHH_05920	0.48	-0.4
1,114,606	-	fpr	NOLOHH_05920	0.48	-0.5
1,114,606	-	fpr	NOLOHH_05920	0.48	+0.7
1,114,606	-	fpr	NOLOHH_05920	0.48	+0.6
1,114,690	+	fpr	NOLOHH_05920	0.60	+0.2
1,114,690	+	fpr	NOLOHH_05920	0.60	+0.7
1,114,690	+	fpr	NOLOHH_05920	0.60	-0.4
1,114,691	-	fpr	NOLOHH_05920	0.60	+1.7
1,114,691	-	fpr	NOLOHH_05920	0.60	-0.5
1,114,691	-	fpr	NOLOHH_05920	0.60	+0.5
1,114,691	-	fpr	NOLOHH_05920	0.60	-0.4
1,114,691	-	fpr	NOLOHH_05920	0.60	+0.5
1,114,695	+	fpr	NOLOHH_05920	0.60	+0.3
1,114,695	+	fpr	NOLOHH_05920	0.60	-2.1
1,114,695	+	fpr	NOLOHH_05920	0.60	+0.2
1,114,696	-	fpr	NOLOHH_05920	0.60	-0.0
1,114,696	-	fpr	NOLOHH_05920	0.60	+0.5
1,114,696	-	fpr	NOLOHH_05920	0.60	-0.1
1,114,807	+	fpr	NOLOHH_05920	0.75	-0.6
1,114,808	-	fpr	NOLOHH_05920	0.75	+0.5
1,114,854	-	fpr	NOLOHH_05920	0.82	+0.7
1,114,905	-	fpr	NOLOHH_05920	0.88	+0.7
1,114,948	+				-0.4
1,114,967	+				-1.4
1,114,967	+				-0.8
1,114,968	-				-0.7
1,114,968	-				-2.1
1,115,002	-				+0.2
1,115,041	-	uspD	NOLOHH_05925	0.10	-0.1
1,115,079	+	uspD	NOLOHH_05925	0.19	-0.0
1,115,079	+	uspD	NOLOHH_05925	0.19	-1.8
1,115,080	-	uspD	NOLOHH_05925	0.20	+0.2
1,115,213	+	uspD	NOLOHH_05925	0.51	+1.7
1,115,232	+	uspD	NOLOHH_05925	0.55	+0.3
1,115,233	-	uspD	NOLOHH_05925	0.55	+1.6
1,115,253	+	uspD	NOLOHH_05925	0.60	+0.2
1,115,253	+	uspD	NOLOHH_05925	0.60	+0.1
1,115,254	-	uspD	NOLOHH_05925	0.60	-1.3
1,115,254	-	uspD	NOLOHH_05925	0.60	+0.5
1,115,273	+	uspD	NOLOHH_05925	0.65	+0.4
1,115,273	+	uspD	NOLOHH_05925	0.65	-0.6
1,115,273	+	uspD	NOLOHH_05925	0.65	+3.1
1,115,273	+	uspD	NOLOHH_05925	0.65	-0.5
1,115,274	-	uspD	NOLOHH_05925	0.65	+2.7
1,115,274	-	uspD	NOLOHH_05925	0.65	+0.2
1,115,274	-	uspD	NOLOHH_05925	0.65	-0.3
1,115,286	-	uspD	NOLOHH_05925	0.68	-0.3
1,115,296	+	uspD	NOLOHH_05925	0.70	-0.6
1,115,311	-	uspD	NOLOHH_05925	0.73	-0.8
1,115,318	-	uspD	NOLOHH_05925	0.75	-1.4
1,115,337	+	uspD	NOLOHH_05925	0.79	+0.5
1,115,337	+	uspD	NOLOHH_05925	0.79	+0.1
1,115,337	+	uspD	NOLOHH_05925	0.79	+0.7
1,115,338	-	uspD	NOLOHH_05925	0.80	-1.0
1,115,362	-	uspD	NOLOHH_05925	0.85	+0.4
1,115,415	+				+0.9
1,115,415	+				+1.0
1,115,416	-				+0.7
1,115,417	+				-0.1
1,115,418	-				-0.7
1,115,418	-				+0.2
1,115,438	+				+1.1
1,115,473	-				+0.5
1,115,549	+	yfcZ	NOLOHH_05930	0.33	-1.4
1,115,672	+	yfcZ	NOLOHH_05930	0.74	-1.3
1,115,720	+	yfcZ	NOLOHH_05930	0.90	-0.1
1,115,723	+				-0.8
1,115,733	-				-0.8
1,115,733	-				-0.4
1,115,733	-				-0.7
1,115,736	+				+0.6
1,115,737	-				+0.2
1,115,737	-				-0.8
1,115,763	+				+0.6
1,115,763	+				-1.6
1,115,763	+				+0.6
1,115,764	-				-1.3
1,115,764	-				+0.8
1,115,792	-				-0.0
1,115,797	+				+1.4
1,115,798	-				-3.1
1,115,827	+				+1.5
1,115,827	+				-0.1
1,115,828	-				-0.5
1,115,828	-				-1.4
1,115,828	-				-1.1
1,115,836	+				-0.8
1,115,865	+				+0.2
1,115,865	+				-3.7
1,115,944	+				+1.3
1,115,952	-				+1.5
1,115,953	+				+0.5
1,115,953	+				-0.4
1,115,953	+				+0.1
1,115,968	-				-1.6
1,115,968	-				+0.3
1,115,976	+				-0.0
1,115,977	-				-0.8
1,115,977	-				-0.8
1,115,990	+				-1.1
1,116,013	-	yiiR	NOLOHH_05935	0.12	-0.3
1,116,021	+	yiiR	NOLOHH_05935	0.13	-1.3
1,116,372	+				-0.8
1,116,373	-				+0.3
1,116,373	-				-1.6
1,116,373	-				-2.6
1,116,394	+				+0.4
1,116,394	+				-0.8
1,116,404	+				-0.4
1,116,404	+				+0.0
1,116,404	+				+0.8
1,116,404	+				-0.0
1,116,404	+				-1.7
1,116,404	+				-0.3
1,116,404	+				+0.3
1,116,404	+				-1.8
1,116,405	-				+0.1
1,116,405	-				-0.0
1,116,405	-				-0.8
1,116,405	-				+0.0
1,116,405	-				+0.6
1,116,405	-				+0.3
1,116,405	-				+0.1
1,116,405	-				-0.6
1,116,405	-				-0.1
1,116,405	-				-0.0
1,116,405	-				+0.7
1,116,405	-				+0.7
1,116,437	+				-0.7
1,116,438	-				+0.2
1,116,469	+				+0.5
1,116,469	+				-0.8
1,116,517	+				+0.6
1,116,517	+				-1.1
1,116,517	+				-0.7
1,116,534	+				+0.3
1,116,535	-				+0.3
1,116,535	-				-0.8
1,116,583	+	yiiQ	NOLOHH_05940	0.13	+0.7
1,116,583	+	yiiQ	NOLOHH_05940	0.13	+0.7
1,116,602	+	yiiQ	NOLOHH_05940	0.17	+0.4
1,116,622	+	yiiQ	NOLOHH_05940	0.20	+0.0
1,116,662	-	yiiQ	NOLOHH_05940	0.27	-0.4
1,116,662	-	yiiQ	NOLOHH_05940	0.27	+0.0