Experiment: Control_ECOR27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yahJ and yahI are separated by 9 nucleotides yahI and yahG are separated by 142 nucleotides
NOLOHH_01835: yahJ - Uncharacterized protein YahJ, at 264,243 to 265,625
yahJ
NOLOHH_01840: yahI - Carbamate kinase-like protein YahI, at 265,635 to 266,585
yahI
NOLOHH_01845: yahG - Uncharacterized protein YahG, at 266,728 to 268,146
yahG
Position (kb) 265
266
267 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 264.719 kb on + strand, within yahJ at 264.719 kb on + strand, within yahJ at 264.719 kb on + strand, within yahJ at 264.760 kb on + strand, within yahJ at 264.760 kb on + strand, within yahJ at 264.760 kb on + strand, within yahJ at 264.761 kb on - strand, within yahJ at 264.761 kb on - strand, within yahJ at 264.761 kb on - strand, within yahJ at 264.904 kb on + strand, within yahJ at 264.904 kb on + strand, within yahJ at 264.904 kb on + strand, within yahJ at 264.905 kb on - strand, within yahJ at 265.110 kb on + strand, within yahJ at 265.110 kb on + strand, within yahJ at 265.110 kb on + strand, within yahJ at 265.110 kb on + strand, within yahJ at 265.111 kb on - strand, within yahJ at 265.111 kb on - strand, within yahJ at 265.111 kb on - strand, within yahJ at 265.144 kb on + strand, within yahJ at 265.144 kb on + strand, within yahJ at 265.262 kb on + strand, within yahJ at 265.263 kb on - strand, within yahJ at 265.263 kb on - strand, within yahJ at 265.263 kb on - strand, within yahJ at 265.296 kb on - strand, within yahJ at 265.309 kb on + strand, within yahJ at 265.309 kb on + strand, within yahJ at 265.309 kb on + strand, within yahJ at 265.310 kb on - strand, within yahJ at 265.462 kb on + strand, within yahJ at 265.463 kb on - strand, within yahJ at 265.463 kb on - strand, within yahJ at 265.463 kb on - strand, within yahJ at 265.463 kb on - strand, within yahJ at 265.463 kb on - strand, within yahJ at 265.463 kb on - strand, within yahJ at 265.465 kb on + strand, within yahJ at 265.465 kb on + strand, within yahJ at 265.466 kb on - strand, within yahJ at 265.466 kb on - strand, within yahJ at 265.466 kb on - strand, within yahJ at 265.610 kb on + strand at 265.628 kb on + strand at 265.629 kb on - strand at 265.629 kb on - strand at 265.629 kb on - strand at 265.629 kb on - strand at 265.637 kb on - strand at 265.637 kb on - strand at 265.643 kb on + strand at 265.646 kb on + strand at 265.646 kb on + strand at 265.646 kb on + strand at 265.647 kb on - strand at 265.649 kb on + strand at 265.650 kb on - strand at 265.703 kb on + strand at 265.793 kb on + strand, within yahI at 265.793 kb on + strand, within yahI at 265.795 kb on + strand, within yahI at 265.795 kb on + strand, within yahI at 265.796 kb on - strand, within yahI at 265.848 kb on - strand, within yahI at 266.070 kb on - strand, within yahI at 266.228 kb on + strand, within yahI at 266.334 kb on - strand, within yahI at 266.404 kb on - strand, within yahI at 266.453 kb on - strand, within yahI at 266.534 kb on + strand at 266.591 kb on + strand at 266.591 kb on + strand at 266.591 kb on + strand at 266.591 kb on + strand at 266.592 kb on - strand at 266.592 kb on - strand at 266.601 kb on - strand at 266.613 kb on + strand at 266.613 kb on + strand at 266.613 kb on + strand at 266.613 kb on + strand at 266.614 kb on - strand at 266.614 kb on - strand at 266.614 kb on - strand at 266.614 kb on - strand at 266.614 kb on - strand at 266.614 kb on - strand at 266.663 kb on - strand at 266.724 kb on + strand at 266.724 kb on + strand at 266.724 kb on + strand at 266.725 kb on - strand at 266.725 kb on - strand at 266.725 kb on - strand at 266.725 kb on - strand at 266.725 kb on - strand at 267.055 kb on - strand, within yahG at 267.059 kb on + strand, within yahG at 267.060 kb on - strand, within yahG at 267.113 kb on + strand, within yahG at 267.114 kb on - strand, within yahG at 267.114 kb on - strand, within yahG at 267.270 kb on + strand, within yahG at 267.271 kb on - strand, within yahG at 267.303 kb on - strand, within yahG at 267.303 kb on - strand, within yahG at 267.303 kb on - strand, within yahG at 267.303 kb on - strand, within yahG at 267.460 kb on + strand, within yahG at 267.461 kb on - strand, within yahG
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECOR27 remove 264,719 + yahJ NOLOHH_01835 0.34 +1.2 264,719 + yahJ NOLOHH_01835 0.34 -0.7 264,719 + yahJ NOLOHH_01835 0.34 +0.2 264,760 + yahJ NOLOHH_01835 0.37 -0.8 264,760 + yahJ NOLOHH_01835 0.37 +0.0 264,760 + yahJ NOLOHH_01835 0.37 -1.0 264,761 - yahJ NOLOHH_01835 0.37 +0.6 264,761 - yahJ NOLOHH_01835 0.37 +1.0 264,761 - yahJ NOLOHH_01835 0.37 +1.6 264,904 + yahJ NOLOHH_01835 0.48 -0.0 264,904 + yahJ NOLOHH_01835 0.48 -0.2 264,904 + yahJ NOLOHH_01835 0.48 +0.4 264,905 - yahJ NOLOHH_01835 0.48 -0.9 265,110 + yahJ NOLOHH_01835 0.63 +0.3 265,110 + yahJ NOLOHH_01835 0.63 -0.0 265,110 + yahJ NOLOHH_01835 0.63 -1.3 265,110 + yahJ NOLOHH_01835 0.63 +0.5 265,111 - yahJ NOLOHH_01835 0.63 -1.8 265,111 - yahJ NOLOHH_01835 0.63 +0.3 265,111 - yahJ NOLOHH_01835 0.63 +1.2 265,144 + yahJ NOLOHH_01835 0.65 +1.2 265,144 + yahJ NOLOHH_01835 0.65 -0.4 265,262 + yahJ NOLOHH_01835 0.74 -1.1 265,263 - yahJ NOLOHH_01835 0.74 +0.6 265,263 - yahJ NOLOHH_01835 0.74 -0.7 265,263 - yahJ NOLOHH_01835 0.74 +0.9 265,296 - yahJ NOLOHH_01835 0.76 -0.4 265,309 + yahJ NOLOHH_01835 0.77 -1.4 265,309 + yahJ NOLOHH_01835 0.77 -0.1 265,309 + yahJ NOLOHH_01835 0.77 -1.1 265,310 - yahJ NOLOHH_01835 0.77 +1.1 265,462 + yahJ NOLOHH_01835 0.88 +0.6 265,463 - yahJ NOLOHH_01835 0.88 +0.4 265,463 - yahJ NOLOHH_01835 0.88 +0.0 265,463 - yahJ NOLOHH_01835 0.88 -1.4 265,463 - yahJ NOLOHH_01835 0.88 +0.0 265,463 - yahJ NOLOHH_01835 0.88 -0.7 265,463 - yahJ NOLOHH_01835 0.88 -0.4 265,465 + yahJ NOLOHH_01835 0.88 -0.4 265,465 + yahJ NOLOHH_01835 0.88 +0.8 265,466 - yahJ NOLOHH_01835 0.88 +0.3 265,466 - yahJ NOLOHH_01835 0.88 +1.2 265,466 - yahJ NOLOHH_01835 0.88 +0.3 265,610 + -1.7 265,628 + +0.5 265,629 - -0.1 265,629 - +0.1 265,629 - +0.2 265,629 - -0.4 265,637 - -0.1 265,637 - +0.4 265,643 + -0.9 265,646 + +0.4 265,646 + -2.5 265,646 + +1.0 265,647 - +1.2 265,649 + +0.2 265,650 - +0.9 265,703 + +0.1 265,793 + yahI NOLOHH_01840 0.17 +0.6 265,793 + yahI NOLOHH_01840 0.17 -2.4 265,795 + yahI NOLOHH_01840 0.17 -0.3 265,795 + yahI NOLOHH_01840 0.17 +0.5 265,796 - yahI NOLOHH_01840 0.17 -1.8 265,848 - yahI NOLOHH_01840 0.22 -1.4 266,070 - yahI NOLOHH_01840 0.46 -1.7 266,228 + yahI NOLOHH_01840 0.62 -1.3 266,334 - yahI NOLOHH_01840 0.74 -0.8 266,404 - yahI NOLOHH_01840 0.81 -0.6 266,453 - yahI NOLOHH_01840 0.86 +1.2 266,534 + -0.1 266,591 + -2.8 266,591 + +0.2 266,591 + -1.2 266,591 + -0.1 266,592 - +0.6 266,592 - +0.5 266,601 - +1.6 266,613 + -0.6 266,613 + -1.9 266,613 + +0.1 266,613 + -0.9 266,614 - +1.1 266,614 - +0.2 266,614 - -0.4 266,614 - -0.7 266,614 - +0.6 266,614 - -0.8 266,663 - -0.3 266,724 + -0.9 266,724 + -1.4 266,724 + -0.0 266,725 - -0.4 266,725 - +0.6 266,725 - +1.8 266,725 - +0.2 266,725 - -0.5 267,055 - yahG NOLOHH_01845 0.23 -2.0 267,059 + yahG NOLOHH_01845 0.23 +1.6 267,060 - yahG NOLOHH_01845 0.23 -0.1 267,113 + yahG NOLOHH_01845 0.27 +0.9 267,114 - yahG NOLOHH_01845 0.27 -0.4 267,114 - yahG NOLOHH_01845 0.27 +0.6 267,270 + yahG NOLOHH_01845 0.38 +1.0 267,271 - yahG NOLOHH_01845 0.38 -0.1 267,303 - yahG NOLOHH_01845 0.41 -0.7 267,303 - yahG NOLOHH_01845 0.41 +0.6 267,303 - yahG NOLOHH_01845 0.41 -1.7 267,303 - yahG NOLOHH_01845 0.41 +0.0 267,460 + yahG NOLOHH_01845 0.52 +0.9 267,461 - yahG NOLOHH_01845 0.52 +0.2
Or see this region's nucleotide sequence