Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_09960

Experiment: R2A_PIPES with Cobalt chloride 512 uM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntsufD and sufC overlap by 4 nucleotidessufC and sufB are separated by 91 nucleotides OKGIIK_09955: sufD - Fe-S cluster assembly protein SufD, at 2,148,094 to 2,149,413 sufD OKGIIK_09960: sufC - Fe-S cluster assembly ATPase SufC, at 2,149,410 to 2,150,174 sufC OKGIIK_09965: sufB - Fe-S cluster assembly protein SufB, at 2,150,266 to 2,151,744 sufB Position (kb) 2149 2150 2151Strain fitness (log2 ratio) -1 0 1at 2150.261 kb on - strandat 2150.261 kb on - strandat 2150.261 kb on - strandat 2150.261 kb on - strandat 2150.261 kb on - strandat 2150.261 kb on - strandat 2150.261 kb on - strandat 2150.261 kb on - strandat 2150.261 kb on - strandat 2150.261 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A_PIPES with Cobalt chloride 512 uM
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2,150,261 - +0.1
2,150,261 - +1.0
2,150,261 - +0.4
2,150,261 - +1.0
2,150,261 - -0.9
2,150,261 - +0.0
2,150,261 - -0.7
2,150,261 - -0.1
2,150,261 - -1.3
2,150,261 - -1.1

Or see this region's nucleotide sequence