Experiment: R2A_PIPES with Cobalt chloride 512 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt adhE and OKGIIK_07715 are separated by 74 nucleotides OKGIIK_07715 and OKGIIK_07720 are separated by 117 nucleotides
OKGIIK_07710: adhE - aldehyde dehydrogenase, at 1,705,942 to 1,707,372
adhE
OKGIIK_07715: OKGIIK_07715 - DUF218 domain-containing protein, at 1,707,447 to 1,708,211
_07715
OKGIIK_07720: OKGIIK_07720 - Phospholipase, at 1,708,329 to 1,709,759
_07720
Position (kb)
1707
1708
1709 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1706.773 kb on + strand, within adhE at 1706.773 kb on + strand, within adhE at 1706.773 kb on + strand, within adhE at 1706.774 kb on - strand, within adhE at 1706.774 kb on - strand, within adhE at 1706.774 kb on - strand, within adhE at 1706.774 kb on - strand, within adhE at 1706.774 kb on - strand, within adhE at 1706.774 kb on - strand, within adhE at 1706.812 kb on + strand, within adhE at 1706.812 kb on + strand, within adhE at 1706.812 kb on + strand, within adhE at 1706.812 kb on + strand, within adhE at 1706.812 kb on + strand, within adhE at 1706.812 kb on + strand, within adhE at 1706.812 kb on + strand, within adhE at 1706.812 kb on + strand, within adhE at 1706.812 kb on + strand, within adhE at 1706.812 kb on + strand, within adhE at 1706.813 kb on - strand, within adhE at 1706.813 kb on - strand, within adhE at 1706.813 kb on - strand, within adhE at 1706.813 kb on - strand, within adhE at 1706.813 kb on - strand, within adhE at 1706.813 kb on - strand, within adhE at 1706.813 kb on - strand, within adhE at 1706.813 kb on - strand, within adhE at 1706.813 kb on - strand, within adhE at 1706.813 kb on - strand, within adhE at 1706.813 kb on - strand, within adhE at 1706.813 kb on - strand, within adhE at 1706.813 kb on - strand, within adhE at 1706.830 kb on + strand, within adhE at 1706.830 kb on + strand, within adhE at 1706.830 kb on + strand, within adhE at 1706.831 kb on - strand, within adhE at 1706.831 kb on - strand, within adhE at 1706.831 kb on - strand, within adhE at 1707.151 kb on + strand, within adhE at 1707.319 kb on + strand at 1707.448 kb on + strand at 1707.448 kb on + strand at 1707.448 kb on + strand at 1707.448 kb on + strand at 1707.448 kb on + strand at 1707.448 kb on + strand at 1707.448 kb on + strand at 1707.449 kb on - strand at 1707.449 kb on - strand at 1707.449 kb on - strand at 1707.449 kb on - strand at 1707.449 kb on - strand at 1707.496 kb on + strand at 1707.496 kb on + strand at 1707.496 kb on + strand at 1707.497 kb on - strand at 1707.497 kb on - strand at 1707.523 kb on + strand at 1707.523 kb on + strand at 1707.523 kb on + strand at 1707.523 kb on + strand at 1707.523 kb on + strand at 1707.523 kb on + strand at 1707.523 kb on + strand at 1707.524 kb on - strand, within OKGIIK_07715 at 1707.524 kb on - strand, within OKGIIK_07715 at 1707.524 kb on - strand, within OKGIIK_07715 at 1707.524 kb on - strand, within OKGIIK_07715 at 1707.524 kb on - strand, within OKGIIK_07715 at 1707.524 kb on - strand, within OKGIIK_07715 at 1707.524 kb on - strand, within OKGIIK_07715 at 1707.559 kb on + strand, within OKGIIK_07715 at 1707.560 kb on - strand, within OKGIIK_07715 at 1707.560 kb on - strand, within OKGIIK_07715 at 1707.560 kb on - strand, within OKGIIK_07715 at 1707.560 kb on - strand, within OKGIIK_07715 at 1707.595 kb on + strand, within OKGIIK_07715 at 1707.595 kb on + strand, within OKGIIK_07715 at 1707.595 kb on + strand, within OKGIIK_07715 at 1707.595 kb on + strand, within OKGIIK_07715 at 1707.595 kb on + strand, within OKGIIK_07715 at 1707.595 kb on + strand, within OKGIIK_07715 at 1707.595 kb on + strand, within OKGIIK_07715 at 1707.595 kb on + strand, within OKGIIK_07715 at 1707.596 kb on - strand, within OKGIIK_07715 at 1707.640 kb on + strand, within OKGIIK_07715 at 1707.640 kb on + strand, within OKGIIK_07715 at 1707.640 kb on + strand, within OKGIIK_07715 at 1707.640 kb on + strand, within OKGIIK_07715 at 1707.640 kb on + strand, within OKGIIK_07715 at 1707.640 kb on + strand, within OKGIIK_07715 at 1707.640 kb on + strand, within OKGIIK_07715 at 1707.640 kb on + strand, within OKGIIK_07715 at 1707.640 kb on + strand, within OKGIIK_07715 at 1707.641 kb on - strand, within OKGIIK_07715 at 1707.641 kb on - strand, within OKGIIK_07715 at 1707.641 kb on - strand, within OKGIIK_07715 at 1707.641 kb on - strand, within OKGIIK_07715 at 1707.641 kb on - strand, within OKGIIK_07715 at 1707.641 kb on - strand, within OKGIIK_07715 at 1707.641 kb on - strand, within OKGIIK_07715 at 1707.700 kb on + strand, within OKGIIK_07715 at 1707.700 kb on + strand, within OKGIIK_07715 at 1707.701 kb on - strand, within OKGIIK_07715 at 1707.701 kb on - strand, within OKGIIK_07715 at 1707.701 kb on - strand, within OKGIIK_07715 at 1707.701 kb on - strand, within OKGIIK_07715 at 1707.743 kb on + strand, within OKGIIK_07715 at 1707.743 kb on + strand, within OKGIIK_07715 at 1707.743 kb on + strand, within OKGIIK_07715 at 1707.743 kb on + strand, within OKGIIK_07715 at 1707.743 kb on + strand, within OKGIIK_07715 at 1707.743 kb on + strand, within OKGIIK_07715 at 1707.743 kb on + strand, within OKGIIK_07715 at 1707.743 kb on + strand, within OKGIIK_07715 at 1707.743 kb on + strand, within OKGIIK_07715 at 1707.743 kb on + strand, within OKGIIK_07715 at 1707.744 kb on - strand, within OKGIIK_07715 at 1707.744 kb on - strand, within OKGIIK_07715 at 1707.744 kb on - strand, within OKGIIK_07715 at 1707.744 kb on - strand, within OKGIIK_07715 at 1707.744 kb on - strand, within OKGIIK_07715 at 1707.744 kb on - strand, within OKGIIK_07715 at 1707.744 kb on - strand, within OKGIIK_07715 at 1707.744 kb on - strand, within OKGIIK_07715 at 1707.744 kb on - strand, within OKGIIK_07715 at 1707.744 kb on - strand, within OKGIIK_07715 at 1707.744 kb on - strand, within OKGIIK_07715 at 1707.744 kb on - strand, within OKGIIK_07715 at 1707.811 kb on + strand, within OKGIIK_07715 at 1707.904 kb on + strand, within OKGIIK_07715 at 1707.978 kb on + strand, within OKGIIK_07715 at 1707.978 kb on + strand, within OKGIIK_07715 at 1707.979 kb on - strand, within OKGIIK_07715 at 1708.046 kb on - strand, within OKGIIK_07715 at 1708.248 kb on + strand at 1708.248 kb on + strand at 1708.248 kb on + strand at 1708.296 kb on - strand at 1708.377 kb on - strand at 1708.377 kb on - strand at 1708.380 kb on + strand at 1708.380 kb on + strand at 1708.380 kb on + strand at 1708.381 kb on - strand at 1708.381 kb on - strand at 1708.464 kb on + strand at 1708.464 kb on + strand at 1708.464 kb on + strand at 1708.464 kb on + strand at 1708.464 kb on + strand at 1708.464 kb on + strand at 1708.464 kb on + strand at 1708.464 kb on + strand at 1708.465 kb on - strand at 1708.465 kb on - strand at 1708.465 kb on - strand at 1708.465 kb on - strand at 1708.465 kb on - strand at 1708.465 kb on - strand at 1708.854 kb on + strand, within OKGIIK_07720 at 1708.854 kb on + strand, within OKGIIK_07720 at 1708.854 kb on + strand, within OKGIIK_07720 at 1708.854 kb on + strand, within OKGIIK_07720 at 1708.855 kb on - strand, within OKGIIK_07720 at 1708.855 kb on - strand, within OKGIIK_07720 at 1708.855 kb on - strand, within OKGIIK_07720 at 1708.855 kb on - strand, within OKGIIK_07720 at 1708.896 kb on + strand, within OKGIIK_07720 at 1708.896 kb on + strand, within OKGIIK_07720 at 1708.897 kb on - strand, within OKGIIK_07720 at 1708.897 kb on - strand, within OKGIIK_07720 at 1708.897 kb on - strand, within OKGIIK_07720 at 1708.897 kb on - strand, within OKGIIK_07720 at 1708.897 kb on - strand, within OKGIIK_07720 at 1708.897 kb on - strand, within OKGIIK_07720 at 1708.914 kb on + strand, within OKGIIK_07720 at 1708.914 kb on + strand, within OKGIIK_07720 at 1708.914 kb on + strand, within OKGIIK_07720 at 1708.915 kb on - strand, within OKGIIK_07720 at 1708.915 kb on - strand, within OKGIIK_07720 at 1708.915 kb on - strand, within OKGIIK_07720 at 1708.915 kb on - strand, within OKGIIK_07720 at 1708.915 kb on - strand, within OKGIIK_07720 at 1708.915 kb on - strand, within OKGIIK_07720 at 1708.915 kb on - strand, within OKGIIK_07720 at 1708.915 kb on - strand, within OKGIIK_07720 at 1708.915 kb on - strand, within OKGIIK_07720 at 1708.915 kb on - strand, within OKGIIK_07720 at 1708.915 kb on - strand, within OKGIIK_07720 at 1709.170 kb on - strand, within OKGIIK_07720 at 1709.170 kb on - strand, within OKGIIK_07720
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Cobalt chloride 512 uM remove 1,706,773 + adhE OKGIIK_07710 0.58 -1.2 1,706,773 + adhE OKGIIK_07710 0.58 -0.3 1,706,773 + adhE OKGIIK_07710 0.58 +0.1 1,706,774 - adhE OKGIIK_07710 0.58 +0.6 1,706,774 - adhE OKGIIK_07710 0.58 +0.8 1,706,774 - adhE OKGIIK_07710 0.58 +1.5 1,706,774 - adhE OKGIIK_07710 0.58 +0.7 1,706,774 - adhE OKGIIK_07710 0.58 -0.9 1,706,774 - adhE OKGIIK_07710 0.58 -2.0 1,706,812 + adhE OKGIIK_07710 0.61 +0.5 1,706,812 + adhE OKGIIK_07710 0.61 -2.2 1,706,812 + adhE OKGIIK_07710 0.61 +0.3 1,706,812 + adhE OKGIIK_07710 0.61 -1.4 1,706,812 + adhE OKGIIK_07710 0.61 -0.1 1,706,812 + adhE OKGIIK_07710 0.61 +0.8 1,706,812 + adhE OKGIIK_07710 0.61 -1.2 1,706,812 + adhE OKGIIK_07710 0.61 -0.2 1,706,812 + adhE OKGIIK_07710 0.61 +0.1 1,706,812 + adhE OKGIIK_07710 0.61 -0.4 1,706,813 - adhE OKGIIK_07710 0.61 +0.6 1,706,813 - adhE OKGIIK_07710 0.61 +0.5 1,706,813 - adhE OKGIIK_07710 0.61 -0.8 1,706,813 - adhE OKGIIK_07710 0.61 +0.2 1,706,813 - adhE OKGIIK_07710 0.61 +0.3 1,706,813 - adhE OKGIIK_07710 0.61 -2.3 1,706,813 - adhE OKGIIK_07710 0.61 +0.2 1,706,813 - adhE OKGIIK_07710 0.61 -0.5 1,706,813 - adhE OKGIIK_07710 0.61 +1.4 1,706,813 - adhE OKGIIK_07710 0.61 +0.9 1,706,813 - adhE OKGIIK_07710 0.61 +1.2 1,706,813 - adhE OKGIIK_07710 0.61 +0.1 1,706,813 - adhE OKGIIK_07710 0.61 -0.1 1,706,830 + adhE OKGIIK_07710 0.62 -0.4 1,706,830 + adhE OKGIIK_07710 0.62 -0.1 1,706,830 + adhE OKGIIK_07710 0.62 +0.5 1,706,831 - adhE OKGIIK_07710 0.62 +0.0 1,706,831 - adhE OKGIIK_07710 0.62 -0.2 1,706,831 - adhE OKGIIK_07710 0.62 -0.8 1,707,151 + adhE OKGIIK_07710 0.84 -0.6 1,707,319 + -0.9 1,707,448 + -0.2 1,707,448 + -0.2 1,707,448 + -1.6 1,707,448 + +1.5 1,707,448 + -1.6 1,707,448 + +1.0 1,707,448 + +0.1 1,707,449 - -0.2 1,707,449 - +2.0 1,707,449 - -1.7 1,707,449 - +0.2 1,707,449 - -0.4 1,707,496 + -0.2 1,707,496 + +0.2 1,707,496 + +0.4 1,707,497 - +0.2 1,707,497 - +0.2 1,707,523 + -0.9 1,707,523 + +0.5 1,707,523 + -0.2 1,707,523 + +0.8 1,707,523 + +0.4 1,707,523 + +0.4 1,707,523 + -1.1 1,707,524 - OKGIIK_07715 0.10 -0.8 1,707,524 - OKGIIK_07715 0.10 +1.8 1,707,524 - OKGIIK_07715 0.10 -1.4 1,707,524 - OKGIIK_07715 0.10 +0.2 1,707,524 - OKGIIK_07715 0.10 +1.8 1,707,524 - OKGIIK_07715 0.10 -0.7 1,707,524 - OKGIIK_07715 0.10 -0.4 1,707,559 + OKGIIK_07715 0.15 -0.9 1,707,560 - OKGIIK_07715 0.15 -0.0 1,707,560 - OKGIIK_07715 0.15 -0.8 1,707,560 - OKGIIK_07715 0.15 +0.4 1,707,560 - OKGIIK_07715 0.15 +0.0 1,707,595 + OKGIIK_07715 0.19 -1.0 1,707,595 + OKGIIK_07715 0.19 +1.2 1,707,595 + OKGIIK_07715 0.19 -0.1 1,707,595 + OKGIIK_07715 0.19 -1.4 1,707,595 + OKGIIK_07715 0.19 -2.0 1,707,595 + OKGIIK_07715 0.19 -0.4 1,707,595 + OKGIIK_07715 0.19 +1.4 1,707,595 + OKGIIK_07715 0.19 +2.3 1,707,596 - OKGIIK_07715 0.19 -1.4 1,707,640 + OKGIIK_07715 0.25 -1.2 1,707,640 + OKGIIK_07715 0.25 -1.3 1,707,640 + OKGIIK_07715 0.25 -0.8 1,707,640 + OKGIIK_07715 0.25 +0.3 1,707,640 + OKGIIK_07715 0.25 -1.8 1,707,640 + OKGIIK_07715 0.25 +0.9 1,707,640 + OKGIIK_07715 0.25 -0.6 1,707,640 + OKGIIK_07715 0.25 -0.8 1,707,640 + OKGIIK_07715 0.25 -1.0 1,707,641 - OKGIIK_07715 0.25 +0.8 1,707,641 - OKGIIK_07715 0.25 -0.2 1,707,641 - OKGIIK_07715 0.25 -0.9 1,707,641 - OKGIIK_07715 0.25 -0.3 1,707,641 - OKGIIK_07715 0.25 +1.2 1,707,641 - OKGIIK_07715 0.25 +0.8 1,707,641 - OKGIIK_07715 0.25 +0.7 1,707,700 + OKGIIK_07715 0.33 -0.2 1,707,700 + OKGIIK_07715 0.33 -0.5 1,707,701 - OKGIIK_07715 0.33 -1.8 1,707,701 - OKGIIK_07715 0.33 -0.9 1,707,701 - OKGIIK_07715 0.33 -2.8 1,707,701 - OKGIIK_07715 0.33 -0.8 1,707,743 + OKGIIK_07715 0.39 +0.0 1,707,743 + OKGIIK_07715 0.39 +0.7 1,707,743 + OKGIIK_07715 0.39 -0.0 1,707,743 + OKGIIK_07715 0.39 +0.2 1,707,743 + OKGIIK_07715 0.39 -0.2 1,707,743 + OKGIIK_07715 0.39 +0.3 1,707,743 + OKGIIK_07715 0.39 +1.0 1,707,743 + OKGIIK_07715 0.39 +0.4 1,707,743 + OKGIIK_07715 0.39 +1.5 1,707,743 + OKGIIK_07715 0.39 -0.6 1,707,744 - OKGIIK_07715 0.39 +0.1 1,707,744 - OKGIIK_07715 0.39 +1.8 1,707,744 - OKGIIK_07715 0.39 +0.7 1,707,744 - OKGIIK_07715 0.39 -0.4 1,707,744 - OKGIIK_07715 0.39 -1.4 1,707,744 - OKGIIK_07715 0.39 -1.4 1,707,744 - OKGIIK_07715 0.39 -0.2 1,707,744 - OKGIIK_07715 0.39 -2.7 1,707,744 - OKGIIK_07715 0.39 +0.6 1,707,744 - OKGIIK_07715 0.39 -1.3 1,707,744 - OKGIIK_07715 0.39 -1.2 1,707,744 - OKGIIK_07715 0.39 +0.7 1,707,811 + OKGIIK_07715 0.48 -2.0 1,707,904 + OKGIIK_07715 0.60 +0.8 1,707,978 + OKGIIK_07715 0.69 -0.4 1,707,978 + OKGIIK_07715 0.69 +0.4 1,707,979 - OKGIIK_07715 0.70 -0.2 1,708,046 - OKGIIK_07715 0.78 +1.7 1,708,248 + +0.6 1,708,248 + +0.8 1,708,248 + +0.9 1,708,296 - +1.8 1,708,377 - +0.4 1,708,377 - -1.2 1,708,380 + -1.4 1,708,380 + -0.3 1,708,380 + +0.5 1,708,381 - -0.2 1,708,381 - +0.4 1,708,464 + +0.9 1,708,464 + -1.6 1,708,464 + +0.2 1,708,464 + +1.2 1,708,464 + +0.7 1,708,464 + +0.7 1,708,464 + -0.9 1,708,464 + -0.2 1,708,465 - +0.1 1,708,465 - +0.8 1,708,465 - +0.1 1,708,465 - -1.6 1,708,465 - +0.5 1,708,465 - -1.6 1,708,854 + OKGIIK_07720 0.37 +0.3 1,708,854 + OKGIIK_07720 0.37 -0.1 1,708,854 + OKGIIK_07720 0.37 +0.2 1,708,854 + OKGIIK_07720 0.37 -0.1 1,708,855 - OKGIIK_07720 0.37 +0.1 1,708,855 - OKGIIK_07720 0.37 -1.4 1,708,855 - OKGIIK_07720 0.37 -0.6 1,708,855 - OKGIIK_07720 0.37 -0.2 1,708,896 + OKGIIK_07720 0.40 +0.4 1,708,896 + OKGIIK_07720 0.40 +0.7 1,708,897 - OKGIIK_07720 0.40 -0.4 1,708,897 - OKGIIK_07720 0.40 +0.4 1,708,897 - OKGIIK_07720 0.40 -0.6 1,708,897 - OKGIIK_07720 0.40 -1.6 1,708,897 - OKGIIK_07720 0.40 -0.4 1,708,897 - OKGIIK_07720 0.40 -1.0 1,708,914 + OKGIIK_07720 0.41 -1.4 1,708,914 + OKGIIK_07720 0.41 +0.2 1,708,914 + OKGIIK_07720 0.41 -0.7 1,708,915 - OKGIIK_07720 0.41 -0.7 1,708,915 - OKGIIK_07720 0.41 -1.2 1,708,915 - OKGIIK_07720 0.41 +2.0 1,708,915 - OKGIIK_07720 0.41 -1.2 1,708,915 - OKGIIK_07720 0.41 +0.6 1,708,915 - OKGIIK_07720 0.41 -1.3 1,708,915 - OKGIIK_07720 0.41 +0.2 1,708,915 - OKGIIK_07720 0.41 -0.1 1,708,915 - OKGIIK_07720 0.41 +1.4 1,708,915 - OKGIIK_07720 0.41 -1.6 1,708,915 - OKGIIK_07720 0.41 +1.6 1,709,170 - OKGIIK_07720 0.59 -1.8 1,709,170 - OKGIIK_07720 0.59 -1.6
Or see this region's nucleotide sequence