Experiment: R2A_PIPES with Cobalt chloride 512 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_01640 and OKGIIK_01645 overlap by 4 nucleotides OKGIIK_01645 and OKGIIK_01650 are separated by 63 nucleotides
OKGIIK_01640: OKGIIK_01640 - Oxidoreductase, at 370,060 to 371,370
_01640
OKGIIK_01645: OKGIIK_01645 - Dihydrodipicolinate synthase family protein, at 371,367 to 372,272
_01645
OKGIIK_01650: OKGIIK_01650 - Ketoglutarate semialdehyde dehydrogenase, at 372,336 to 373,934
_01650
Position (kb) 371
372
373 Strain fitness (log2 ratio) -2
-1
0
1
2 at 370.370 kb on + strand, within OKGIIK_01640 at 370.371 kb on - strand, within OKGIIK_01640 at 371.697 kb on + strand, within OKGIIK_01645 at 371.697 kb on + strand, within OKGIIK_01645 at 371.697 kb on + strand, within OKGIIK_01645 at 371.697 kb on + strand, within OKGIIK_01645 at 371.697 kb on + strand, within OKGIIK_01645 at 371.697 kb on + strand, within OKGIIK_01645 at 371.697 kb on + strand, within OKGIIK_01645 at 371.697 kb on + strand, within OKGIIK_01645 at 371.697 kb on + strand, within OKGIIK_01645 at 371.698 kb on - strand, within OKGIIK_01645 at 371.698 kb on - strand, within OKGIIK_01645 at 371.698 kb on - strand, within OKGIIK_01645 at 371.698 kb on - strand, within OKGIIK_01645 at 371.698 kb on - strand, within OKGIIK_01645 at 371.698 kb on - strand, within OKGIIK_01645 at 371.698 kb on - strand, within OKGIIK_01645 at 371.698 kb on - strand, within OKGIIK_01645 at 371.703 kb on + strand, within OKGIIK_01645 at 371.703 kb on + strand, within OKGIIK_01645 at 371.703 kb on + strand, within OKGIIK_01645 at 371.703 kb on + strand, within OKGIIK_01645 at 371.703 kb on + strand, within OKGIIK_01645 at 371.704 kb on - strand, within OKGIIK_01645 at 371.704 kb on - strand, within OKGIIK_01645 at 371.704 kb on - strand, within OKGIIK_01645 at 371.704 kb on - strand, within OKGIIK_01645 at 371.778 kb on + strand, within OKGIIK_01645 at 371.778 kb on + strand, within OKGIIK_01645 at 371.778 kb on + strand, within OKGIIK_01645 at 371.778 kb on + strand, within OKGIIK_01645 at 371.778 kb on + strand, within OKGIIK_01645 at 371.778 kb on + strand, within OKGIIK_01645 at 371.778 kb on + strand, within OKGIIK_01645 at 371.778 kb on + strand, within OKGIIK_01645 at 371.778 kb on + strand, within OKGIIK_01645 at 371.778 kb on + strand, within OKGIIK_01645 at 371.778 kb on + strand, within OKGIIK_01645 at 371.778 kb on + strand, within OKGIIK_01645 at 371.778 kb on + strand, within OKGIIK_01645 at 371.779 kb on - strand, within OKGIIK_01645 at 371.779 kb on - strand, within OKGIIK_01645 at 371.779 kb on - strand, within OKGIIK_01645 at 371.779 kb on - strand, within OKGIIK_01645 at 371.779 kb on - strand, within OKGIIK_01645 at 371.779 kb on - strand, within OKGIIK_01645 at 371.779 kb on - strand, within OKGIIK_01645 at 371.797 kb on - strand, within OKGIIK_01645 at 371.797 kb on - strand, within OKGIIK_01645 at 372.013 kb on - strand, within OKGIIK_01645 at 372.081 kb on + strand, within OKGIIK_01645 at 372.081 kb on + strand, within OKGIIK_01645 at 372.081 kb on + strand, within OKGIIK_01645 at 372.081 kb on + strand, within OKGIIK_01645 at 372.081 kb on + strand, within OKGIIK_01645 at 372.081 kb on + strand, within OKGIIK_01645 at 372.081 kb on + strand, within OKGIIK_01645 at 372.082 kb on - strand, within OKGIIK_01645 at 372.082 kb on - strand, within OKGIIK_01645 at 372.082 kb on - strand, within OKGIIK_01645 at 372.082 kb on - strand, within OKGIIK_01645 at 372.082 kb on - strand, within OKGIIK_01645 at 372.082 kb on - strand, within OKGIIK_01645 at 372.082 kb on - strand, within OKGIIK_01645 at 372.082 kb on - strand, within OKGIIK_01645 at 372.082 kb on - strand, within OKGIIK_01645 at 372.328 kb on + strand at 372.328 kb on + strand at 372.561 kb on + strand, within OKGIIK_01650 at 372.562 kb on - strand, within OKGIIK_01650 at 372.981 kb on + strand, within OKGIIK_01650 at 372.981 kb on + strand, within OKGIIK_01650 at 372.982 kb on - strand, within OKGIIK_01650 at 372.982 kb on - strand, within OKGIIK_01650 at 373.110 kb on + strand, within OKGIIK_01650 at 373.110 kb on + strand, within OKGIIK_01650 at 373.110 kb on + strand, within OKGIIK_01650 at 373.110 kb on + strand, within OKGIIK_01650 at 373.110 kb on + strand, within OKGIIK_01650 at 373.111 kb on - strand, within OKGIIK_01650
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Cobalt chloride 512 uM remove 370,370 + OKGIIK_01640 0.24 +1.5 370,371 - OKGIIK_01640 0.24 +0.2 371,697 + OKGIIK_01645 0.36 -1.9 371,697 + OKGIIK_01645 0.36 -0.1 371,697 + OKGIIK_01645 0.36 +0.9 371,697 + OKGIIK_01645 0.36 +0.2 371,697 + OKGIIK_01645 0.36 -0.2 371,697 + OKGIIK_01645 0.36 -0.8 371,697 + OKGIIK_01645 0.36 -0.9 371,697 + OKGIIK_01645 0.36 -1.4 371,697 + OKGIIK_01645 0.36 -0.3 371,698 - OKGIIK_01645 0.37 -0.3 371,698 - OKGIIK_01645 0.37 -0.3 371,698 - OKGIIK_01645 0.37 -2.2 371,698 - OKGIIK_01645 0.37 -0.3 371,698 - OKGIIK_01645 0.37 +0.3 371,698 - OKGIIK_01645 0.37 -1.2 371,698 - OKGIIK_01645 0.37 -0.9 371,698 - OKGIIK_01645 0.37 +2.1 371,703 + OKGIIK_01645 0.37 -0.2 371,703 + OKGIIK_01645 0.37 +0.5 371,703 + OKGIIK_01645 0.37 -1.9 371,703 + OKGIIK_01645 0.37 -0.7 371,703 + OKGIIK_01645 0.37 +1.1 371,704 - OKGIIK_01645 0.37 -0.3 371,704 - OKGIIK_01645 0.37 +0.5 371,704 - OKGIIK_01645 0.37 -0.1 371,704 - OKGIIK_01645 0.37 -1.2 371,778 + OKGIIK_01645 0.45 -1.6 371,778 + OKGIIK_01645 0.45 +1.5 371,778 + OKGIIK_01645 0.45 -0.5 371,778 + OKGIIK_01645 0.45 -0.3 371,778 + OKGIIK_01645 0.45 +0.6 371,778 + OKGIIK_01645 0.45 +0.6 371,778 + OKGIIK_01645 0.45 +0.2 371,778 + OKGIIK_01645 0.45 -1.3 371,778 + OKGIIK_01645 0.45 +0.8 371,778 + OKGIIK_01645 0.45 +0.7 371,778 + OKGIIK_01645 0.45 -0.2 371,778 + OKGIIK_01645 0.45 -0.3 371,778 + OKGIIK_01645 0.45 +0.6 371,779 - OKGIIK_01645 0.45 -0.1 371,779 - OKGIIK_01645 0.45 -1.7 371,779 - OKGIIK_01645 0.45 +0.0 371,779 - OKGIIK_01645 0.45 -2.0 371,779 - OKGIIK_01645 0.45 -1.2 371,779 - OKGIIK_01645 0.45 +0.5 371,779 - OKGIIK_01645 0.45 +0.1 371,797 - OKGIIK_01645 0.47 -1.3 371,797 - OKGIIK_01645 0.47 +1.1 372,013 - OKGIIK_01645 0.71 -0.2 372,081 + OKGIIK_01645 0.79 +0.6 372,081 + OKGIIK_01645 0.79 +0.4 372,081 + OKGIIK_01645 0.79 -0.7 372,081 + OKGIIK_01645 0.79 -1.5 372,081 + OKGIIK_01645 0.79 -0.1 372,081 + OKGIIK_01645 0.79 -0.2 372,081 + OKGIIK_01645 0.79 -0.6 372,082 - OKGIIK_01645 0.79 +0.5 372,082 - OKGIIK_01645 0.79 +0.3 372,082 - OKGIIK_01645 0.79 +0.6 372,082 - OKGIIK_01645 0.79 +0.5 372,082 - OKGIIK_01645 0.79 -1.2 372,082 - OKGIIK_01645 0.79 +0.8 372,082 - OKGIIK_01645 0.79 +0.4 372,082 - OKGIIK_01645 0.79 -0.5 372,082 - OKGIIK_01645 0.79 +1.2 372,328 + -0.2 372,328 + -0.5 372,561 + OKGIIK_01650 0.14 +1.7 372,562 - OKGIIK_01650 0.14 +0.6 372,981 + OKGIIK_01650 0.40 +0.5 372,981 + OKGIIK_01650 0.40 -0.5 372,982 - OKGIIK_01650 0.40 -0.5 372,982 - OKGIIK_01650 0.40 +0.5 373,110 + OKGIIK_01650 0.48 +0.7 373,110 + OKGIIK_01650 0.48 +0.5 373,110 + OKGIIK_01650 0.48 -1.5 373,110 + OKGIIK_01650 0.48 +0.6 373,110 + OKGIIK_01650 0.48 +1.4 373,111 - OKGIIK_01650 0.48 +0.3
Or see this region's nucleotide sequence