Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06980 and MPMX19_06981 are separated by 19 nucleotides MPMX19_06981 and MPMX19_06982 are separated by 65 nucleotides
MPMX19_06980: MPMX19_06980 - hypothetical protein, at 260,403 to 262,355
_06980
MPMX19_06981: MPMX19_06981 - hypothetical protein, at 262,375 to 263,358
_06981
MPMX19_06982: MPMX19_06982 - Aldehyde dehydrogenase, thermostable, at 263,424 to 264,878
_06982
Position (kb) 262
263
264 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 261.516 kb on + strand, within MPMX19_06980 at 261.516 kb on + strand, within MPMX19_06980 at 261.516 kb on + strand, within MPMX19_06980 at 261.516 kb on + strand, within MPMX19_06980 at 261.517 kb on - strand, within MPMX19_06980 at 261.517 kb on - strand, within MPMX19_06980 at 261.754 kb on - strand, within MPMX19_06980 at 261.754 kb on - strand, within MPMX19_06980 at 261.825 kb on + strand, within MPMX19_06980 at 261.825 kb on + strand, within MPMX19_06980 at 261.825 kb on + strand, within MPMX19_06980 at 261.825 kb on + strand, within MPMX19_06980 at 261.826 kb on - strand, within MPMX19_06980 at 262.117 kb on - strand, within MPMX19_06980 at 262.117 kb on - strand, within MPMX19_06980 at 262.170 kb on + strand at 262.170 kb on + strand at 262.171 kb on - strand at 262.171 kb on - strand at 262.251 kb on + strand at 262.251 kb on + strand at 262.252 kb on - strand at 262.252 kb on - strand at 262.252 kb on - strand at 262.252 kb on - strand at 262.391 kb on + strand at 262.426 kb on + strand at 262.426 kb on + strand at 262.426 kb on + strand at 262.427 kb on - strand at 262.427 kb on - strand at 262.427 kb on - strand at 262.699 kb on + strand, within MPMX19_06981 at 262.699 kb on + strand, within MPMX19_06981 at 262.699 kb on + strand, within MPMX19_06981 at 262.699 kb on + strand, within MPMX19_06981 at 262.699 kb on + strand, within MPMX19_06981 at 262.699 kb on + strand, within MPMX19_06981 at 262.700 kb on - strand, within MPMX19_06981 at 262.700 kb on - strand, within MPMX19_06981 at 262.700 kb on - strand, within MPMX19_06981 at 262.700 kb on - strand, within MPMX19_06981 at 262.700 kb on - strand, within MPMX19_06981 at 262.700 kb on - strand, within MPMX19_06981 at 262.700 kb on - strand, within MPMX19_06981 at 263.536 kb on - strand at 263.536 kb on - strand at 263.536 kb on - strand at 264.261 kb on + strand, within MPMX19_06982 at 264.261 kb on + strand, within MPMX19_06982 at 264.261 kb on + strand, within MPMX19_06982 at 264.261 kb on + strand, within MPMX19_06982 at 264.262 kb on - strand, within MPMX19_06982
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 261,516 + MPMX19_06980 0.57 -0.0 261,516 + MPMX19_06980 0.57 -0.1 261,516 + MPMX19_06980 0.57 +2.0 261,516 + MPMX19_06980 0.57 -0.5 261,517 - MPMX19_06980 0.57 +1.3 261,517 - MPMX19_06980 0.57 -1.7 261,754 - MPMX19_06980 0.69 -0.9 261,754 - MPMX19_06980 0.69 +0.3 261,825 + MPMX19_06980 0.73 -0.5 261,825 + MPMX19_06980 0.73 +0.4 261,825 + MPMX19_06980 0.73 -0.0 261,825 + MPMX19_06980 0.73 -3.2 261,826 - MPMX19_06980 0.73 +0.0 262,117 - MPMX19_06980 0.88 +1.4 262,117 - MPMX19_06980 0.88 -0.2 262,170 + +0.3 262,170 + -0.9 262,171 - +0.7 262,171 - -0.1 262,251 + -1.2 262,251 + +0.1 262,252 - -0.5 262,252 - -2.1 262,252 - +0.4 262,252 - +0.9 262,391 + +0.0 262,426 + -1.2 262,426 + -0.2 262,426 + -0.0 262,427 - -0.5 262,427 - +1.0 262,427 - +0.5 262,699 + MPMX19_06981 0.33 +0.5 262,699 + MPMX19_06981 0.33 -0.8 262,699 + MPMX19_06981 0.33 +0.0 262,699 + MPMX19_06981 0.33 +0.2 262,699 + MPMX19_06981 0.33 +1.4 262,699 + MPMX19_06981 0.33 -0.1 262,700 - MPMX19_06981 0.33 +0.6 262,700 - MPMX19_06981 0.33 -0.5 262,700 - MPMX19_06981 0.33 -1.1 262,700 - MPMX19_06981 0.33 -1.5 262,700 - MPMX19_06981 0.33 +1.4 262,700 - MPMX19_06981 0.33 +0.8 262,700 - MPMX19_06981 0.33 -0.0 263,536 - +0.1 263,536 - +0.1 263,536 - +1.3 264,261 + MPMX19_06982 0.58 -0.9 264,261 + MPMX19_06982 0.58 -0.4 264,261 + MPMX19_06982 0.58 +0.7 264,261 + MPMX19_06982 0.58 -1.4 264,262 - MPMX19_06982 0.58 +0.9
Or see this region's nucleotide sequence