Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06968 and MPMX19_06969 overlap by 4 nucleotides MPMX19_06969 and MPMX19_06970 are separated by 8 nucleotides MPMX19_06970 and MPMX19_06971 are separated by 23 nucleotides MPMX19_06971 and MPMX19_06972 are separated by 38 nucleotides
MPMX19_06968: MPMX19_06968 - hypothetical protein, at 245,250 to 246,743
_06968
MPMX19_06969: MPMX19_06969 - hypothetical protein, at 246,740 to 246,994
_06969
MPMX19_06970: MPMX19_06970 - putative ABC transporter ATP-binding protein YknY, at 247,003 to 247,695
_06970
MPMX19_06971: MPMX19_06971 - Macrolide export ATP-binding/permease protein MacB, at 247,719 to 248,921
_06971
MPMX19_06972: MPMX19_06972 - hypothetical protein, at 248,960 to 250,144
_06972
Position (kb) 247
248
249 Strain fitness (log2 ratio) -2
-1
0
1 at 246.917 kb on + strand, within MPMX19_06969 at 246.917 kb on + strand, within MPMX19_06969 at 246.917 kb on + strand, within MPMX19_06969 at 246.918 kb on - strand, within MPMX19_06969 at 247.032 kb on + strand at 247.032 kb on + strand at 247.032 kb on + strand at 247.032 kb on + strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.284 kb on - strand, within MPMX19_06970 at 248.267 kb on + strand, within MPMX19_06971 at 248.267 kb on + strand, within MPMX19_06971 at 248.267 kb on + strand, within MPMX19_06971 at 248.268 kb on - strand, within MPMX19_06971 at 248.769 kb on + strand, within MPMX19_06971 at 248.769 kb on + strand, within MPMX19_06971 at 248.769 kb on + strand, within MPMX19_06971 at 248.769 kb on + strand, within MPMX19_06971 at 248.769 kb on + strand, within MPMX19_06971 at 248.770 kb on - strand, within MPMX19_06971 at 248.770 kb on - strand, within MPMX19_06971 at 248.770 kb on - strand, within MPMX19_06971 at 248.770 kb on - strand, within MPMX19_06971 at 248.770 kb on - strand, within MPMX19_06971 at 248.770 kb on - strand, within MPMX19_06971 at 249.287 kb on + strand, within MPMX19_06972 at 249.287 kb on + strand, within MPMX19_06972 at 249.341 kb on - strand, within MPMX19_06972 at 249.346 kb on + strand, within MPMX19_06972 at 249.346 kb on + strand, within MPMX19_06972 at 249.346 kb on + strand, within MPMX19_06972 at 249.346 kb on + strand, within MPMX19_06972 at 249.346 kb on + strand, within MPMX19_06972 at 249.347 kb on - strand, within MPMX19_06972 at 249.347 kb on - strand, within MPMX19_06972 at 249.347 kb on - strand, within MPMX19_06972 at 249.347 kb on - strand, within MPMX19_06972 at 249.545 kb on + strand, within MPMX19_06972 at 249.545 kb on + strand, within MPMX19_06972 at 249.546 kb on - strand, within MPMX19_06972 at 249.546 kb on - strand, within MPMX19_06972 at 249.546 kb on - strand, within MPMX19_06972 at 249.546 kb on - strand, within MPMX19_06972 at 249.546 kb on - strand, within MPMX19_06972 at 249.546 kb on - strand, within MPMX19_06972 at 249.779 kb on - strand, within MPMX19_06972
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 246,917 + MPMX19_06969 0.69 -1.9 246,917 + MPMX19_06969 0.69 -0.3 246,917 + MPMX19_06969 0.69 +0.8 246,918 - MPMX19_06969 0.70 -1.3 247,032 + +0.7 247,032 + -1.6 247,032 + -0.6 247,032 + -0.3 247,033 - -0.5 247,033 - -0.4 247,033 - -0.7 247,033 - -0.3 247,033 - -0.0 247,033 - -0.2 247,033 - -0.7 247,284 - MPMX19_06970 0.41 +1.7 248,267 + MPMX19_06971 0.46 +1.1 248,267 + MPMX19_06971 0.46 +0.0 248,267 + MPMX19_06971 0.46 +0.4 248,268 - MPMX19_06971 0.46 +0.5 248,769 + MPMX19_06971 0.87 -1.5 248,769 + MPMX19_06971 0.87 +1.2 248,769 + MPMX19_06971 0.87 -1.2 248,769 + MPMX19_06971 0.87 +0.5 248,769 + MPMX19_06971 0.87 -0.4 248,770 - MPMX19_06971 0.87 -0.1 248,770 - MPMX19_06971 0.87 +0.6 248,770 - MPMX19_06971 0.87 -1.0 248,770 - MPMX19_06971 0.87 -0.9 248,770 - MPMX19_06971 0.87 -0.5 248,770 - MPMX19_06971 0.87 -0.3 249,287 + MPMX19_06972 0.28 -1.2 249,287 + MPMX19_06972 0.28 -1.6 249,341 - MPMX19_06972 0.32 -0.3 249,346 + MPMX19_06972 0.33 -1.6 249,346 + MPMX19_06972 0.33 -1.8 249,346 + MPMX19_06972 0.33 -1.3 249,346 + MPMX19_06972 0.33 -1.1 249,346 + MPMX19_06972 0.33 -1.5 249,347 - MPMX19_06972 0.33 -2.0 249,347 - MPMX19_06972 0.33 -0.0 249,347 - MPMX19_06972 0.33 -1.1 249,347 - MPMX19_06972 0.33 -1.6 249,545 + MPMX19_06972 0.49 -0.5 249,545 + MPMX19_06972 0.49 -0.6 249,546 - MPMX19_06972 0.49 -0.4 249,546 - MPMX19_06972 0.49 -1.4 249,546 - MPMX19_06972 0.49 -0.7 249,546 - MPMX19_06972 0.49 +0.6 249,546 - MPMX19_06972 0.49 +0.2 249,546 - MPMX19_06972 0.49 -0.5 249,779 - MPMX19_06972 0.69 -0.1
Or see this region's nucleotide sequence