Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06952 and MPMX19_06953 are separated by 16 nucleotides MPMX19_06953 and MPMX19_06954 are separated by 65 nucleotides
MPMX19_06952: MPMX19_06952 - Electron transfer flavoprotein subunit alpha, at 228,701 to 229,636
_06952
MPMX19_06953: MPMX19_06953 - Electron transfer flavoprotein subunit beta, at 229,653 to 230,402
_06953
MPMX19_06954: MPMX19_06954 - hypothetical protein, at 230,468 to 231,445
_06954
Position (kb) 229
230
231 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 228.676 kb on + strand at 228.677 kb on - strand at 228.871 kb on - strand, within MPMX19_06952 at 228.871 kb on - strand, within MPMX19_06952 at 228.871 kb on - strand, within MPMX19_06952 at 228.871 kb on - strand, within MPMX19_06952 at 228.871 kb on - strand, within MPMX19_06952 at 228.871 kb on - strand, within MPMX19_06952 at 228.871 kb on - strand, within MPMX19_06952 at 228.871 kb on - strand, within MPMX19_06952 at 228.871 kb on - strand, within MPMX19_06952 at 228.871 kb on - strand, within MPMX19_06952 at 229.534 kb on + strand, within MPMX19_06952 at 230.409 kb on + strand at 230.409 kb on + strand at 230.409 kb on + strand at 230.410 kb on - strand at 230.410 kb on - strand at 230.416 kb on + strand at 230.416 kb on + strand at 230.416 kb on + strand at 230.417 kb on - strand at 230.417 kb on - strand at 230.596 kb on - strand, within MPMX19_06954 at 230.596 kb on - strand, within MPMX19_06954 at 230.596 kb on - strand, within MPMX19_06954 at 230.596 kb on - strand, within MPMX19_06954 at 230.596 kb on - strand, within MPMX19_06954 at 231.337 kb on - strand, within MPMX19_06954 at 231.337 kb on - strand, within MPMX19_06954 at 231.399 kb on + strand at 231.399 kb on + strand at 231.399 kb on + strand at 231.399 kb on + strand at 231.399 kb on + strand at 231.399 kb on + strand at 231.399 kb on + strand at 231.399 kb on + strand at 231.399 kb on + strand at 231.399 kb on + strand at 231.400 kb on - strand at 231.400 kb on - strand at 231.400 kb on - strand at 231.400 kb on - strand at 231.400 kb on - strand at 231.400 kb on - strand at 231.400 kb on - strand at 231.400 kb on - strand at 231.400 kb on - strand at 231.400 kb on - strand at 231.400 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 228,676 + -0.5 228,677 - -0.1 228,871 - MPMX19_06952 0.18 +0.3 228,871 - MPMX19_06952 0.18 +0.0 228,871 - MPMX19_06952 0.18 -1.8 228,871 - MPMX19_06952 0.18 -0.6 228,871 - MPMX19_06952 0.18 -1.8 228,871 - MPMX19_06952 0.18 -0.0 228,871 - MPMX19_06952 0.18 -0.9 228,871 - MPMX19_06952 0.18 -0.1 228,871 - MPMX19_06952 0.18 -0.4 228,871 - MPMX19_06952 0.18 -1.0 229,534 + MPMX19_06952 0.89 -0.6 230,409 + -1.8 230,409 + +1.1 230,409 + +0.4 230,410 - +0.3 230,410 - -0.4 230,416 + -0.8 230,416 + +0.7 230,416 + +0.3 230,417 - -0.3 230,417 - -0.2 230,596 - MPMX19_06954 0.13 +1.2 230,596 - MPMX19_06954 0.13 -0.5 230,596 - MPMX19_06954 0.13 +0.0 230,596 - MPMX19_06954 0.13 +0.7 230,596 - MPMX19_06954 0.13 +0.0 231,337 - MPMX19_06954 0.89 -0.4 231,337 - MPMX19_06954 0.89 +0.5 231,399 + -0.5 231,399 + -1.5 231,399 + -2.1 231,399 + -0.3 231,399 + -0.0 231,399 + -1.6 231,399 + -0.6 231,399 + -1.0 231,399 + +1.2 231,399 + -0.3 231,400 - -1.2 231,400 - -0.4 231,400 - +0.9 231,400 - +0.7 231,400 - +0.6 231,400 - -0.4 231,400 - -0.6 231,400 - -0.7 231,400 - +1.1 231,400 - -3.0 231,400 - +0.2
Or see this region's nucleotide sequence