Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06825 and MPMX19_06826 are separated by 137 nucleotides MPMX19_06826 and MPMX19_06827 are separated by 2 nucleotides
MPMX19_06825: MPMX19_06825 - hypothetical protein, at 90,595 to 91,443
_06825
MPMX19_06826: MPMX19_06826 - N-alpha-acetyl-L-2,4-diaminobutyric acid deacetylase, at 91,581 to 92,615
_06826
MPMX19_06827: MPMX19_06827 - Ectoine hydrolase, at 92,618 to 93,817
_06827
Position (kb)
91
92
93 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 90.770 kb on + strand, within MPMX19_06825 at 90.770 kb on + strand, within MPMX19_06825 at 90.771 kb on - strand, within MPMX19_06825 at 90.771 kb on - strand, within MPMX19_06825 at 90.771 kb on - strand, within MPMX19_06825 at 90.863 kb on + strand, within MPMX19_06825 at 90.863 kb on + strand, within MPMX19_06825 at 90.863 kb on + strand, within MPMX19_06825 at 90.864 kb on - strand, within MPMX19_06825 at 90.864 kb on - strand, within MPMX19_06825 at 90.864 kb on - strand, within MPMX19_06825 at 91.025 kb on + strand, within MPMX19_06825 at 91.025 kb on + strand, within MPMX19_06825 at 91.025 kb on + strand, within MPMX19_06825 at 91.025 kb on + strand, within MPMX19_06825 at 91.025 kb on + strand, within MPMX19_06825 at 91.026 kb on - strand, within MPMX19_06825 at 91.026 kb on - strand, within MPMX19_06825 at 91.026 kb on - strand, within MPMX19_06825 at 91.026 kb on - strand, within MPMX19_06825 at 91.026 kb on - strand, within MPMX19_06825 at 91.026 kb on - strand, within MPMX19_06825 at 91.026 kb on - strand, within MPMX19_06825 at 91.097 kb on + strand, within MPMX19_06825 at 91.097 kb on + strand, within MPMX19_06825 at 91.097 kb on + strand, within MPMX19_06825 at 91.097 kb on + strand, within MPMX19_06825 at 91.097 kb on + strand, within MPMX19_06825 at 91.098 kb on - strand, within MPMX19_06825 at 91.098 kb on - strand, within MPMX19_06825 at 91.098 kb on - strand, within MPMX19_06825 at 91.191 kb on - strand, within MPMX19_06825 at 91.298 kb on + strand, within MPMX19_06825 at 91.298 kb on + strand, within MPMX19_06825 at 91.299 kb on - strand, within MPMX19_06825 at 91.299 kb on - strand, within MPMX19_06825 at 91.299 kb on - strand, within MPMX19_06825 at 92.020 kb on + strand, within MPMX19_06826 at 92.020 kb on + strand, within MPMX19_06826 at 92.020 kb on + strand, within MPMX19_06826 at 92.020 kb on + strand, within MPMX19_06826 at 92.020 kb on + strand, within MPMX19_06826 at 92.020 kb on + strand, within MPMX19_06826 at 92.020 kb on + strand, within MPMX19_06826 at 92.021 kb on - strand, within MPMX19_06826 at 92.021 kb on - strand, within MPMX19_06826 at 92.021 kb on - strand, within MPMX19_06826 at 92.021 kb on - strand, within MPMX19_06826 at 92.059 kb on + strand, within MPMX19_06826 at 92.059 kb on + strand, within MPMX19_06826 at 92.059 kb on + strand, within MPMX19_06826 at 92.059 kb on + strand, within MPMX19_06826 at 92.059 kb on + strand, within MPMX19_06826 at 92.060 kb on - strand, within MPMX19_06826 at 92.060 kb on - strand, within MPMX19_06826 at 92.060 kb on - strand, within MPMX19_06826 at 92.218 kb on + strand, within MPMX19_06826 at 92.218 kb on + strand, within MPMX19_06826 at 92.218 kb on + strand, within MPMX19_06826 at 92.218 kb on + strand, within MPMX19_06826 at 92.218 kb on + strand, within MPMX19_06826 at 92.218 kb on + strand, within MPMX19_06826 at 92.327 kb on - strand, within MPMX19_06826 at 92.416 kb on + strand, within MPMX19_06826 at 92.416 kb on + strand, within MPMX19_06826 at 92.416 kb on + strand, within MPMX19_06826 at 92.417 kb on - strand, within MPMX19_06826 at 92.417 kb on - strand, within MPMX19_06826 at 92.417 kb on - strand, within MPMX19_06826 at 92.417 kb on - strand, within MPMX19_06826 at 92.417 kb on - strand, within MPMX19_06826 at 92.524 kb on + strand at 92.710 kb on + strand at 92.817 kb on + strand, within MPMX19_06827 at 92.817 kb on + strand, within MPMX19_06827 at 92.865 kb on + strand, within MPMX19_06827 at 93.030 kb on + strand, within MPMX19_06827 at 93.030 kb on + strand, within MPMX19_06827 at 93.030 kb on + strand, within MPMX19_06827 at 93.031 kb on - strand, within MPMX19_06827 at 93.031 kb on - strand, within MPMX19_06827 at 93.040 kb on - strand, within MPMX19_06827 at 93.040 kb on - strand, within MPMX19_06827 at 93.040 kb on - strand, within MPMX19_06827 at 93.157 kb on - strand, within MPMX19_06827 at 93.216 kb on + strand, within MPMX19_06827 at 93.217 kb on - strand, within MPMX19_06827 at 93.217 kb on - strand, within MPMX19_06827 at 93.217 kb on - strand, within MPMX19_06827 at 93.217 kb on - strand, within MPMX19_06827 at 93.217 kb on - strand, within MPMX19_06827 at 93.315 kb on + strand, within MPMX19_06827 at 93.315 kb on + strand, within MPMX19_06827 at 93.315 kb on + strand, within MPMX19_06827 at 93.315 kb on + strand, within MPMX19_06827 at 93.315 kb on + strand, within MPMX19_06827 at 93.315 kb on + strand, within MPMX19_06827 at 93.316 kb on - strand, within MPMX19_06827 at 93.316 kb on - strand, within MPMX19_06827 at 93.316 kb on - strand, within MPMX19_06827 at 93.316 kb on - strand, within MPMX19_06827 at 93.316 kb on - strand, within MPMX19_06827 at 93.414 kb on + strand, within MPMX19_06827 at 93.415 kb on - strand, within MPMX19_06827 at 93.415 kb on - strand, within MPMX19_06827 at 93.435 kb on + strand, within MPMX19_06827 at 93.435 kb on + strand, within MPMX19_06827 at 93.435 kb on + strand, within MPMX19_06827 at 93.435 kb on + strand, within MPMX19_06827 at 93.436 kb on - strand, within MPMX19_06827 at 93.436 kb on - strand, within MPMX19_06827 at 93.436 kb on - strand, within MPMX19_06827 at 93.436 kb on - strand, within MPMX19_06827 at 93.534 kb on + strand, within MPMX19_06827 at 93.534 kb on + strand, within MPMX19_06827 at 93.534 kb on + strand, within MPMX19_06827 at 93.534 kb on + strand, within MPMX19_06827 at 93.534 kb on + strand, within MPMX19_06827 at 93.535 kb on - strand, within MPMX19_06827 at 93.535 kb on - strand, within MPMX19_06827 at 93.535 kb on - strand, within MPMX19_06827 at 93.535 kb on - strand, within MPMX19_06827 at 93.535 kb on - strand, within MPMX19_06827 at 93.573 kb on + strand, within MPMX19_06827
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 90,770 + MPMX19_06825 0.21 -2.5 90,770 + MPMX19_06825 0.21 -1.3 90,771 - MPMX19_06825 0.21 -0.4 90,771 - MPMX19_06825 0.21 +1.5 90,771 - MPMX19_06825 0.21 -0.9 90,863 + MPMX19_06825 0.32 -1.1 90,863 + MPMX19_06825 0.32 -0.2 90,863 + MPMX19_06825 0.32 +0.0 90,864 - MPMX19_06825 0.32 -0.1 90,864 - MPMX19_06825 0.32 -0.8 90,864 - MPMX19_06825 0.32 -1.8 91,025 + MPMX19_06825 0.51 +1.0 91,025 + MPMX19_06825 0.51 -0.9 91,025 + MPMX19_06825 0.51 +1.1 91,025 + MPMX19_06825 0.51 +0.7 91,025 + MPMX19_06825 0.51 -0.1 91,026 - MPMX19_06825 0.51 -0.9 91,026 - MPMX19_06825 0.51 -1.0 91,026 - MPMX19_06825 0.51 +0.2 91,026 - MPMX19_06825 0.51 -0.6 91,026 - MPMX19_06825 0.51 +0.4 91,026 - MPMX19_06825 0.51 +1.4 91,026 - MPMX19_06825 0.51 -0.3 91,097 + MPMX19_06825 0.59 +0.1 91,097 + MPMX19_06825 0.59 -1.3 91,097 + MPMX19_06825 0.59 +0.5 91,097 + MPMX19_06825 0.59 +0.6 91,097 + MPMX19_06825 0.59 +0.7 91,098 - MPMX19_06825 0.59 -0.0 91,098 - MPMX19_06825 0.59 -1.3 91,098 - MPMX19_06825 0.59 -0.5 91,191 - MPMX19_06825 0.70 -0.6 91,298 + MPMX19_06825 0.83 -0.2 91,298 + MPMX19_06825 0.83 -2.8 91,299 - MPMX19_06825 0.83 -1.2 91,299 - MPMX19_06825 0.83 -1.0 91,299 - MPMX19_06825 0.83 -2.0 92,020 + MPMX19_06826 0.42 -2.9 92,020 + MPMX19_06826 0.42 -1.3 92,020 + MPMX19_06826 0.42 -1.0 92,020 + MPMX19_06826 0.42 +1.1 92,020 + MPMX19_06826 0.42 -1.8 92,020 + MPMX19_06826 0.42 -0.1 92,020 + MPMX19_06826 0.42 -0.1 92,021 - MPMX19_06826 0.43 +0.7 92,021 - MPMX19_06826 0.43 +0.5 92,021 - MPMX19_06826 0.43 +0.3 92,021 - MPMX19_06826 0.43 -0.5 92,059 + MPMX19_06826 0.46 -0.5 92,059 + MPMX19_06826 0.46 +0.2 92,059 + MPMX19_06826 0.46 +0.2 92,059 + MPMX19_06826 0.46 +0.5 92,059 + MPMX19_06826 0.46 +0.5 92,060 - MPMX19_06826 0.46 +0.9 92,060 - MPMX19_06826 0.46 +0.7 92,060 - MPMX19_06826 0.46 -0.9 92,218 + MPMX19_06826 0.62 -1.3 92,218 + MPMX19_06826 0.62 +0.3 92,218 + MPMX19_06826 0.62 +0.6 92,218 + MPMX19_06826 0.62 +0.7 92,218 + MPMX19_06826 0.62 +1.0 92,218 + MPMX19_06826 0.62 -1.5 92,327 - MPMX19_06826 0.72 -1.3 92,416 + MPMX19_06826 0.81 +0.6 92,416 + MPMX19_06826 0.81 -0.4 92,416 + MPMX19_06826 0.81 -0.5 92,417 - MPMX19_06826 0.81 -0.9 92,417 - MPMX19_06826 0.81 +0.1 92,417 - MPMX19_06826 0.81 -1.8 92,417 - MPMX19_06826 0.81 +1.1 92,417 - MPMX19_06826 0.81 +0.1 92,524 + +0.1 92,710 + -1.2 92,817 + MPMX19_06827 0.17 +0.2 92,817 + MPMX19_06827 0.17 -1.8 92,865 + MPMX19_06827 0.21 -0.8 93,030 + MPMX19_06827 0.34 -2.1 93,030 + MPMX19_06827 0.34 +1.2 93,030 + MPMX19_06827 0.34 -1.8 93,031 - MPMX19_06827 0.34 -0.6 93,031 - MPMX19_06827 0.34 +1.0 93,040 - MPMX19_06827 0.35 -0.0 93,040 - MPMX19_06827 0.35 -2.1 93,040 - MPMX19_06827 0.35 -0.3 93,157 - MPMX19_06827 0.45 -0.3 93,216 + MPMX19_06827 0.50 -1.3 93,217 - MPMX19_06827 0.50 -1.2 93,217 - MPMX19_06827 0.50 +0.2 93,217 - MPMX19_06827 0.50 -0.2 93,217 - MPMX19_06827 0.50 -0.3 93,217 - MPMX19_06827 0.50 -0.7 93,315 + MPMX19_06827 0.58 +0.1 93,315 + MPMX19_06827 0.58 -0.3 93,315 + MPMX19_06827 0.58 -0.4 93,315 + MPMX19_06827 0.58 -0.0 93,315 + MPMX19_06827 0.58 -0.7 93,315 + MPMX19_06827 0.58 -1.8 93,316 - MPMX19_06827 0.58 -0.8 93,316 - MPMX19_06827 0.58 -0.9 93,316 - MPMX19_06827 0.58 +1.1 93,316 - MPMX19_06827 0.58 -0.2 93,316 - MPMX19_06827 0.58 -0.9 93,414 + MPMX19_06827 0.66 +1.4 93,415 - MPMX19_06827 0.66 -0.9 93,415 - MPMX19_06827 0.66 +1.1 93,435 + MPMX19_06827 0.68 +0.9 93,435 + MPMX19_06827 0.68 -0.7 93,435 + MPMX19_06827 0.68 -0.7 93,435 + MPMX19_06827 0.68 -0.7 93,436 - MPMX19_06827 0.68 -1.2 93,436 - MPMX19_06827 0.68 -1.4 93,436 - MPMX19_06827 0.68 -1.4 93,436 - MPMX19_06827 0.68 -1.9 93,534 + MPMX19_06827 0.76 -0.2 93,534 + MPMX19_06827 0.76 +1.4 93,534 + MPMX19_06827 0.76 -1.7 93,534 + MPMX19_06827 0.76 -1.1 93,534 + MPMX19_06827 0.76 +2.3 93,535 - MPMX19_06827 0.76 +1.1 93,535 - MPMX19_06827 0.76 +0.2 93,535 - MPMX19_06827 0.76 -1.4 93,535 - MPMX19_06827 0.76 +0.7 93,535 - MPMX19_06827 0.76 -1.6 93,573 + MPMX19_06827 0.80 -0.3
Or see this region's nucleotide sequence