Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06757 and MPMX19_06758 are separated by 26 nucleotides MPMX19_06758 and MPMX19_06759 overlap by 4 nucleotides MPMX19_06759 and MPMX19_06760 are separated by 49 nucleotides
MPMX19_06757: MPMX19_06757 - hypothetical protein, at 23,247 to 24,002
_06757
MPMX19_06758: MPMX19_06758 - Putative aliphatic sulfonates transport permease protein SsuC, at 24,029 to 24,910
_06758
MPMX19_06759: MPMX19_06759 - Taurine import ATP-binding protein TauB, at 24,907 to 25,710
_06759
MPMX19_06760: MPMX19_06760 - Taurine-binding periplasmic protein, at 25,760 to 26,767
_06760
Position (kb) 24
25
26 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 23.932 kb on + strand at 23.932 kb on + strand at 23.932 kb on + strand at 23.933 kb on - strand at 23.933 kb on - strand at 24.466 kb on - strand, within MPMX19_06758 at 24.466 kb on - strand, within MPMX19_06758 at 24.466 kb on - strand, within MPMX19_06758 at 25.319 kb on + strand, within MPMX19_06759 at 25.320 kb on - strand, within MPMX19_06759 at 25.320 kb on - strand, within MPMX19_06759 at 25.320 kb on - strand, within MPMX19_06759 at 25.320 kb on - strand, within MPMX19_06759 at 25.320 kb on - strand, within MPMX19_06759 at 25.679 kb on + strand at 25.679 kb on + strand at 25.680 kb on - strand at 25.761 kb on + strand at 25.761 kb on + strand at 25.761 kb on + strand at 25.761 kb on + strand at 25.761 kb on + strand at 25.761 kb on + strand at 25.761 kb on + strand at 25.762 kb on - strand at 25.762 kb on - strand at 25.762 kb on - strand at 25.762 kb on - strand at 25.806 kb on + strand at 25.806 kb on + strand at 26.325 kb on + strand, within MPMX19_06760 at 26.325 kb on + strand, within MPMX19_06760 at 26.325 kb on + strand, within MPMX19_06760 at 26.325 kb on + strand, within MPMX19_06760 at 26.325 kb on + strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.326 kb on - strand, within MPMX19_06760 at 26.337 kb on + strand, within MPMX19_06760 at 26.337 kb on + strand, within MPMX19_06760 at 26.338 kb on - strand, within MPMX19_06760 at 26.338 kb on - strand, within MPMX19_06760 at 26.595 kb on + strand, within MPMX19_06760 at 26.595 kb on + strand, within MPMX19_06760 at 26.596 kb on - strand, within MPMX19_06760 at 26.596 kb on - strand, within MPMX19_06760 at 26.596 kb on - strand, within MPMX19_06760 at 26.653 kb on + strand, within MPMX19_06760 at 26.654 kb on - strand, within MPMX19_06760 at 26.654 kb on - strand, within MPMX19_06760 at 26.661 kb on + strand, within MPMX19_06760
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 23,932 + +0.6 23,932 + -1.1 23,932 + +0.2 23,933 - -0.7 23,933 - +1.0 24,466 - MPMX19_06758 0.50 +0.6 24,466 - MPMX19_06758 0.50 -1.1 24,466 - MPMX19_06758 0.50 -1.1 25,319 + MPMX19_06759 0.51 +0.1 25,320 - MPMX19_06759 0.51 +1.3 25,320 - MPMX19_06759 0.51 +0.1 25,320 - MPMX19_06759 0.51 +0.8 25,320 - MPMX19_06759 0.51 +0.2 25,320 - MPMX19_06759 0.51 +0.4 25,679 + +1.3 25,679 + -0.0 25,680 - +2.3 25,761 + +0.0 25,761 + -0.2 25,761 + -1.8 25,761 + -3.4 25,761 + +0.3 25,761 + +0.5 25,761 + +0.7 25,762 - +1.4 25,762 - -0.9 25,762 - -1.2 25,762 - +0.1 25,806 + -1.9 25,806 + -1.6 26,325 + MPMX19_06760 0.56 -0.1 26,325 + MPMX19_06760 0.56 +0.0 26,325 + MPMX19_06760 0.56 +0.4 26,325 + MPMX19_06760 0.56 +0.0 26,325 + MPMX19_06760 0.56 -0.7 26,326 - MPMX19_06760 0.56 -0.8 26,326 - MPMX19_06760 0.56 +0.1 26,326 - MPMX19_06760 0.56 -0.6 26,326 - MPMX19_06760 0.56 -1.5 26,326 - MPMX19_06760 0.56 +0.5 26,326 - MPMX19_06760 0.56 -0.9 26,326 - MPMX19_06760 0.56 +2.1 26,337 + MPMX19_06760 0.57 +0.2 26,337 + MPMX19_06760 0.57 -0.2 26,338 - MPMX19_06760 0.57 +0.9 26,338 - MPMX19_06760 0.57 -0.3 26,595 + MPMX19_06760 0.83 -0.1 26,595 + MPMX19_06760 0.83 -0.8 26,596 - MPMX19_06760 0.83 -0.3 26,596 - MPMX19_06760 0.83 -2.3 26,596 - MPMX19_06760 0.83 -1.4 26,653 + MPMX19_06760 0.89 -1.1 26,654 - MPMX19_06760 0.89 +1.1 26,654 - MPMX19_06760 0.89 -0.9 26,661 + MPMX19_06760 0.89 -1.7
Or see this region's nucleotide sequence