Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06749 and MPMX19_06750 are separated by 70 nucleotides MPMX19_06750 and MPMX19_06751 are separated by 10 nucleotides MPMX19_06751 and MPMX19_06752 are separated by 17 nucleotides
MPMX19_06749: MPMX19_06749 - hypothetical protein, at 14,282 to 16,156
_06749
MPMX19_06750: MPMX19_06750 - Aliphatic sulfonates import ATP-binding protein SsuB, at 16,227 to 17,006
_06750
MPMX19_06751: MPMX19_06751 - Putative aliphatic sulfonates transport permease protein SsuC, at 17,017 to 17,811
_06751
MPMX19_06752: MPMX19_06752 - hypothetical protein, at 17,829 to 18,836
_06752
Position (kb) 17
18 Strain fitness (log2 ratio) -2
-1
0
1
2 at 16.043 kb on + strand at 16.043 kb on + strand at 16.044 kb on - strand at 16.337 kb on + strand, within MPMX19_06750 at 16.338 kb on - strand, within MPMX19_06750 at 16.338 kb on - strand, within MPMX19_06750 at 16.395 kb on - strand, within MPMX19_06750 at 16.750 kb on + strand, within MPMX19_06750 at 16.750 kb on + strand, within MPMX19_06750 at 16.751 kb on - strand, within MPMX19_06750 at 16.751 kb on - strand, within MPMX19_06750 at 16.751 kb on - strand, within MPMX19_06750 at 16.751 kb on - strand, within MPMX19_06750 at 16.751 kb on - strand, within MPMX19_06750 at 16.751 kb on - strand, within MPMX19_06750 at 17.018 kb on + strand at 17.018 kb on + strand at 17.159 kb on + strand, within MPMX19_06751 at 17.159 kb on + strand, within MPMX19_06751 at 17.160 kb on - strand, within MPMX19_06751 at 17.160 kb on - strand, within MPMX19_06751 at 17.204 kb on + strand, within MPMX19_06751 at 17.204 kb on + strand, within MPMX19_06751 at 17.204 kb on + strand, within MPMX19_06751 at 17.204 kb on + strand, within MPMX19_06751 at 17.204 kb on + strand, within MPMX19_06751 at 17.205 kb on - strand, within MPMX19_06751 at 17.205 kb on - strand, within MPMX19_06751 at 17.205 kb on - strand, within MPMX19_06751 at 17.205 kb on - strand, within MPMX19_06751 at 17.205 kb on - strand, within MPMX19_06751 at 17.238 kb on + strand, within MPMX19_06751 at 17.312 kb on + strand, within MPMX19_06751 at 17.313 kb on - strand, within MPMX19_06751 at 17.313 kb on - strand, within MPMX19_06751 at 17.471 kb on + strand, within MPMX19_06751 at 17.471 kb on + strand, within MPMX19_06751 at 17.471 kb on + strand, within MPMX19_06751 at 17.471 kb on + strand, within MPMX19_06751 at 17.471 kb on + strand, within MPMX19_06751 at 17.471 kb on + strand, within MPMX19_06751 at 17.472 kb on - strand, within MPMX19_06751 at 17.472 kb on - strand, within MPMX19_06751 at 17.472 kb on - strand, within MPMX19_06751 at 17.472 kb on - strand, within MPMX19_06751 at 17.472 kb on - strand, within MPMX19_06751 at 17.472 kb on - strand, within MPMX19_06751 at 17.472 kb on - strand, within MPMX19_06751 at 17.699 kb on + strand, within MPMX19_06751 at 17.699 kb on + strand, within MPMX19_06751 at 17.700 kb on - strand, within MPMX19_06751 at 17.983 kb on + strand, within MPMX19_06752 at 18.119 kb on - strand, within MPMX19_06752 at 18.505 kb on + strand, within MPMX19_06752 at 18.505 kb on + strand, within MPMX19_06752 at 18.505 kb on + strand, within MPMX19_06752 at 18.505 kb on + strand, within MPMX19_06752 at 18.506 kb on - strand, within MPMX19_06752 at 18.506 kb on - strand, within MPMX19_06752 at 18.506 kb on - strand, within MPMX19_06752 at 18.506 kb on - strand, within MPMX19_06752 at 18.676 kb on + strand, within MPMX19_06752 at 18.676 kb on + strand, within MPMX19_06752 at 18.676 kb on + strand, within MPMX19_06752 at 18.676 kb on + strand, within MPMX19_06752 at 18.676 kb on + strand, within MPMX19_06752 at 18.677 kb on - strand, within MPMX19_06752
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 16,043 + -1.5 16,043 + -0.6 16,044 - +2.3 16,337 + MPMX19_06750 0.14 -0.0 16,338 - MPMX19_06750 0.14 +0.5 16,338 - MPMX19_06750 0.14 -0.6 16,395 - MPMX19_06750 0.22 +0.6 16,750 + MPMX19_06750 0.67 +0.2 16,750 + MPMX19_06750 0.67 +0.7 16,751 - MPMX19_06750 0.67 -0.3 16,751 - MPMX19_06750 0.67 +0.4 16,751 - MPMX19_06750 0.67 +0.0 16,751 - MPMX19_06750 0.67 -0.6 16,751 - MPMX19_06750 0.67 +0.7 16,751 - MPMX19_06750 0.67 -0.6 17,018 + -1.6 17,018 + -0.1 17,159 + MPMX19_06751 0.18 -0.0 17,159 + MPMX19_06751 0.18 +0.2 17,160 - MPMX19_06751 0.18 -0.1 17,160 - MPMX19_06751 0.18 -0.5 17,204 + MPMX19_06751 0.24 -0.4 17,204 + MPMX19_06751 0.24 +0.3 17,204 + MPMX19_06751 0.24 -0.3 17,204 + MPMX19_06751 0.24 +1.1 17,204 + MPMX19_06751 0.24 -0.5 17,205 - MPMX19_06751 0.24 +0.1 17,205 - MPMX19_06751 0.24 -0.5 17,205 - MPMX19_06751 0.24 -0.6 17,205 - MPMX19_06751 0.24 +1.1 17,205 - MPMX19_06751 0.24 -1.5 17,238 + MPMX19_06751 0.28 -1.9 17,312 + MPMX19_06751 0.37 -1.6 17,313 - MPMX19_06751 0.37 +0.1 17,313 - MPMX19_06751 0.37 -0.6 17,471 + MPMX19_06751 0.57 +0.9 17,471 + MPMX19_06751 0.57 -0.9 17,471 + MPMX19_06751 0.57 -0.6 17,471 + MPMX19_06751 0.57 -0.3 17,471 + MPMX19_06751 0.57 +0.1 17,471 + MPMX19_06751 0.57 -2.7 17,472 - MPMX19_06751 0.57 +1.0 17,472 - MPMX19_06751 0.57 +0.1 17,472 - MPMX19_06751 0.57 -0.6 17,472 - MPMX19_06751 0.57 +0.7 17,472 - MPMX19_06751 0.57 -0.1 17,472 - MPMX19_06751 0.57 +2.0 17,472 - MPMX19_06751 0.57 +1.1 17,699 + MPMX19_06751 0.86 -0.2 17,699 + MPMX19_06751 0.86 -0.8 17,700 - MPMX19_06751 0.86 +0.7 17,983 + MPMX19_06752 0.15 -1.8 18,119 - MPMX19_06752 0.29 +0.1 18,505 + MPMX19_06752 0.67 +0.4 18,505 + MPMX19_06752 0.67 -1.3 18,505 + MPMX19_06752 0.67 -0.4 18,505 + MPMX19_06752 0.67 -0.4 18,506 - MPMX19_06752 0.67 -0.0 18,506 - MPMX19_06752 0.67 -0.6 18,506 - MPMX19_06752 0.67 -0.8 18,506 - MPMX19_06752 0.67 -1.3 18,676 + MPMX19_06752 0.84 -0.8 18,676 + MPMX19_06752 0.84 +0.2 18,676 + MPMX19_06752 0.84 +1.7 18,676 + MPMX19_06752 0.84 +0.4 18,676 + MPMX19_06752 0.84 +1.1 18,677 - MPMX19_06752 0.84 -2.7
Or see this region's nucleotide sequence