Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06492 and MPMX19_06493 are separated by 125 nucleotides MPMX19_06493 and MPMX19_06494 are separated by 136 nucleotides MPMX19_06494 and MPMX19_06495 are separated by 548 nucleotides
MPMX19_06492: MPMX19_06492 - IS5 family transposase ISAzs10, at 275,264 to 276,343
_06492
MPMX19_06493: MPMX19_06493 - hypothetical protein, at 276,469 to 276,648
_06493
MPMX19_06494: MPMX19_06494 - hypothetical protein, at 276,785 to 277,357
_06494
MPMX19_06495: MPMX19_06495 - hypothetical protein, at 277,906 to 278,991
_06495
Position (kb) 276
277
278 Strain fitness (log2 ratio) -2
-1
0
1
2 at 275.865 kb on - strand, within MPMX19_06492 at 276.053 kb on + strand, within MPMX19_06492 at 276.302 kb on + strand at 276.303 kb on - strand at 276.303 kb on - strand at 276.341 kb on + strand at 276.341 kb on + strand at 276.341 kb on + strand at 276.341 kb on + strand at 276.342 kb on - strand at 276.342 kb on - strand at 276.404 kb on + strand at 276.405 kb on - strand at 276.468 kb on + strand at 276.469 kb on - strand at 276.469 kb on - strand at 276.469 kb on - strand at 276.492 kb on + strand, within MPMX19_06493 at 276.492 kb on + strand, within MPMX19_06493 at 276.493 kb on - strand, within MPMX19_06493 at 276.493 kb on - strand, within MPMX19_06493 at 276.653 kb on + strand at 276.693 kb on + strand at 276.694 kb on - strand at 276.694 kb on - strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.783 kb on + strand at 276.784 kb on - strand at 276.870 kb on - strand, within MPMX19_06494 at 276.870 kb on - strand, within MPMX19_06494 at 276.870 kb on - strand, within MPMX19_06494 at 276.913 kb on + strand, within MPMX19_06494 at 276.913 kb on + strand, within MPMX19_06494 at 276.914 kb on - strand, within MPMX19_06494 at 276.914 kb on - strand, within MPMX19_06494 at 276.914 kb on - strand, within MPMX19_06494 at 276.914 kb on - strand, within MPMX19_06494 at 276.914 kb on - strand, within MPMX19_06494 at 277.079 kb on + strand, within MPMX19_06494 at 277.079 kb on + strand, within MPMX19_06494 at 277.079 kb on + strand, within MPMX19_06494 at 277.079 kb on + strand, within MPMX19_06494 at 277.079 kb on + strand, within MPMX19_06494 at 277.079 kb on + strand, within MPMX19_06494 at 277.079 kb on + strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.082 kb on + strand, within MPMX19_06494 at 277.082 kb on + strand, within MPMX19_06494 at 277.083 kb on - strand, within MPMX19_06494 at 277.083 kb on - strand, within MPMX19_06494 at 277.083 kb on - strand, within MPMX19_06494 at 277.083 kb on - strand, within MPMX19_06494 at 277.083 kb on - strand, within MPMX19_06494 at 277.118 kb on + strand, within MPMX19_06494 at 277.118 kb on + strand, within MPMX19_06494 at 277.118 kb on + strand, within MPMX19_06494 at 277.118 kb on + strand, within MPMX19_06494 at 277.118 kb on + strand, within MPMX19_06494 at 277.118 kb on + strand, within MPMX19_06494 at 277.118 kb on + strand, within MPMX19_06494 at 277.118 kb on + strand, within MPMX19_06494 at 277.119 kb on - strand, within MPMX19_06494 at 277.119 kb on - strand, within MPMX19_06494 at 277.119 kb on - strand, within MPMX19_06494 at 277.119 kb on - strand, within MPMX19_06494 at 277.119 kb on - strand, within MPMX19_06494 at 277.119 kb on - strand, within MPMX19_06494 at 277.119 kb on - strand, within MPMX19_06494 at 277.119 kb on - strand, within MPMX19_06494 at 277.189 kb on + strand, within MPMX19_06494 at 277.190 kb on - strand, within MPMX19_06494 at 277.203 kb on - strand, within MPMX19_06494 at 277.203 kb on - strand, within MPMX19_06494 at 277.203 kb on - strand, within MPMX19_06494 at 277.203 kb on - strand, within MPMX19_06494 at 277.314 kb on + strand at 277.314 kb on + strand at 277.314 kb on + strand at 277.314 kb on + strand at 277.315 kb on - strand at 277.315 kb on - strand at 277.325 kb on + strand at 277.325 kb on + strand at 277.325 kb on + strand at 277.325 kb on + strand at 277.325 kb on + strand at 277.325 kb on + strand at 277.326 kb on - strand at 277.326 kb on - strand at 277.326 kb on - strand at 277.326 kb on - strand at 277.326 kb on - strand at 277.326 kb on - strand at 277.326 kb on - strand at 277.501 kb on - strand at 277.515 kb on - strand at 277.525 kb on - strand at 277.594 kb on + strand at 277.594 kb on + strand at 277.594 kb on + strand at 277.594 kb on + strand at 277.594 kb on + strand at 277.595 kb on - strand at 277.595 kb on - strand at 277.595 kb on - strand at 277.652 kb on + strand at 277.667 kb on + strand at 277.668 kb on - strand at 277.668 kb on - strand at 277.681 kb on + strand at 277.682 kb on - strand at 277.691 kb on - strand at 277.691 kb on - strand at 277.693 kb on + strand at 277.693 kb on + strand at 277.694 kb on - strand at 277.836 kb on + strand at 277.836 kb on + strand at 277.837 kb on - strand at 277.837 kb on - strand at 277.837 kb on - strand at 277.837 kb on - strand at 277.837 kb on - strand at 277.837 kb on - strand at 277.837 kb on - strand at 277.841 kb on + strand at 277.841 kb on + strand at 277.841 kb on + strand at 277.841 kb on + strand at 277.841 kb on + strand at 277.841 kb on + strand at 277.841 kb on + strand at 277.841 kb on + strand at 277.841 kb on + strand at 277.841 kb on + strand at 277.841 kb on + strand at 277.841 kb on + strand at 277.842 kb on - strand at 277.842 kb on - strand at 277.842 kb on - strand at 277.842 kb on - strand at 277.842 kb on - strand at 277.842 kb on - strand at 277.842 kb on - strand at 277.842 kb on - strand at 277.842 kb on - strand at 278.195 kb on + strand, within MPMX19_06495 at 278.195 kb on + strand, within MPMX19_06495 at 278.196 kb on - strand, within MPMX19_06495 at 278.196 kb on - strand, within MPMX19_06495 at 278.270 kb on + strand, within MPMX19_06495 at 278.270 kb on + strand, within MPMX19_06495 at 278.270 kb on + strand, within MPMX19_06495 at 278.270 kb on + strand, within MPMX19_06495 at 278.270 kb on + strand, within MPMX19_06495 at 278.270 kb on + strand, within MPMX19_06495 at 278.270 kb on + strand, within MPMX19_06495 at 278.270 kb on + strand, within MPMX19_06495 at 278.270 kb on + strand, within MPMX19_06495 at 278.270 kb on + strand, within MPMX19_06495 at 278.270 kb on + strand, within MPMX19_06495 at 278.271 kb on - strand, within MPMX19_06495 at 278.271 kb on - strand, within MPMX19_06495 at 278.271 kb on - strand, within MPMX19_06495 at 278.271 kb on - strand, within MPMX19_06495 at 278.271 kb on - strand, within MPMX19_06495 at 278.271 kb on - strand, within MPMX19_06495 at 278.271 kb on - strand, within MPMX19_06495 at 278.271 kb on - strand, within MPMX19_06495 at 278.303 kb on - strand, within MPMX19_06495 at 278.303 kb on - strand, within MPMX19_06495 at 278.303 kb on - strand, within MPMX19_06495
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 275,865 - MPMX19_06492 0.56 -0.4 276,053 + MPMX19_06492 0.73 +0.2 276,302 + -0.9 276,303 - +0.6 276,303 - -0.7 276,341 + +0.3 276,341 + -0.4 276,341 + -0.4 276,341 + -0.3 276,342 - -0.6 276,342 - +1.4 276,404 + +0.9 276,405 - +0.1 276,468 + -0.2 276,469 - +0.7 276,469 - -0.4 276,469 - -0.2 276,492 + MPMX19_06493 0.13 -0.4 276,492 + MPMX19_06493 0.13 +0.1 276,493 - MPMX19_06493 0.13 -0.6 276,493 - MPMX19_06493 0.13 -1.9 276,653 + +0.5 276,693 + -1.1 276,694 - -0.4 276,694 - -1.2 276,777 + +0.6 276,777 + -0.2 276,777 + -0.7 276,777 + -0.8 276,777 + -0.3 276,777 + +0.2 276,777 + -0.4 276,777 + -0.2 276,777 + -1.1 276,777 + -0.8 276,777 + +0.6 276,777 + +0.5 276,777 + +1.9 276,777 + -0.8 276,778 - -1.5 276,778 - +0.9 276,778 - -1.4 276,778 - -0.1 276,778 - -2.1 276,778 - -1.4 276,778 - +0.9 276,778 - -0.6 276,778 - -0.5 276,778 - -1.0 276,778 - +0.3 276,778 - +0.9 276,778 - +0.9 276,783 + +0.2 276,784 - -0.8 276,870 - MPMX19_06494 0.15 +1.3 276,870 - MPMX19_06494 0.15 +0.3 276,870 - MPMX19_06494 0.15 +0.2 276,913 + MPMX19_06494 0.22 +0.4 276,913 + MPMX19_06494 0.22 -0.5 276,914 - MPMX19_06494 0.23 +0.9 276,914 - MPMX19_06494 0.23 -0.9 276,914 - MPMX19_06494 0.23 -0.6 276,914 - MPMX19_06494 0.23 -0.3 276,914 - MPMX19_06494 0.23 +0.4 277,079 + MPMX19_06494 0.51 -0.7 277,079 + MPMX19_06494 0.51 +1.2 277,079 + MPMX19_06494 0.51 -0.1 277,079 + MPMX19_06494 0.51 -1.8 277,079 + MPMX19_06494 0.51 -1.4 277,079 + MPMX19_06494 0.51 +0.1 277,079 + MPMX19_06494 0.51 -1.0 277,080 - MPMX19_06494 0.51 -0.1 277,080 - MPMX19_06494 0.51 -0.7 277,080 - MPMX19_06494 0.51 +0.4 277,080 - MPMX19_06494 0.51 +0.5 277,080 - MPMX19_06494 0.51 -2.1 277,080 - MPMX19_06494 0.51 -0.8 277,080 - MPMX19_06494 0.51 -0.6 277,080 - MPMX19_06494 0.51 +0.0 277,080 - MPMX19_06494 0.51 +0.8 277,080 - MPMX19_06494 0.51 -1.8 277,080 - MPMX19_06494 0.51 -0.1 277,080 - MPMX19_06494 0.51 +0.6 277,080 - MPMX19_06494 0.51 -1.0 277,080 - MPMX19_06494 0.51 +0.6 277,082 + MPMX19_06494 0.52 +0.9 277,082 + MPMX19_06494 0.52 +0.5 277,083 - MPMX19_06494 0.52 -0.3 277,083 - MPMX19_06494 0.52 +0.2 277,083 - MPMX19_06494 0.52 -0.1 277,083 - MPMX19_06494 0.52 -0.2 277,083 - MPMX19_06494 0.52 +1.0 277,118 + MPMX19_06494 0.58 +0.4 277,118 + MPMX19_06494 0.58 -0.9 277,118 + MPMX19_06494 0.58 -0.9 277,118 + MPMX19_06494 0.58 -1.7 277,118 + MPMX19_06494 0.58 -1.7 277,118 + MPMX19_06494 0.58 -0.1 277,118 + MPMX19_06494 0.58 +0.1 277,118 + MPMX19_06494 0.58 +0.0 277,119 - MPMX19_06494 0.58 -0.0 277,119 - MPMX19_06494 0.58 +0.7 277,119 - MPMX19_06494 0.58 +1.3 277,119 - MPMX19_06494 0.58 -1.9 277,119 - MPMX19_06494 0.58 -0.7 277,119 - MPMX19_06494 0.58 +1.5 277,119 - MPMX19_06494 0.58 -0.4 277,119 - MPMX19_06494 0.58 -0.9 277,189 + MPMX19_06494 0.71 -0.4 277,190 - MPMX19_06494 0.71 -0.6 277,203 - MPMX19_06494 0.73 -0.8 277,203 - MPMX19_06494 0.73 -0.7 277,203 - MPMX19_06494 0.73 +0.2 277,203 - MPMX19_06494 0.73 -0.7 277,314 + +1.3 277,314 + +0.7 277,314 + -0.9 277,314 + -0.2 277,315 - +0.3 277,315 - -0.3 277,325 + +0.3 277,325 + +0.1 277,325 + -0.5 277,325 + -2.7 277,325 + -1.3 277,325 + +0.3 277,326 - -0.6 277,326 - +0.5 277,326 - +0.3 277,326 - -1.1 277,326 - -1.0 277,326 - -0.9 277,326 - -0.3 277,501 - +1.2 277,515 - +0.5 277,525 - -0.8 277,594 + -1.0 277,594 + +0.7 277,594 + +0.2 277,594 + +0.1 277,594 + -1.0 277,595 - -1.1 277,595 - -0.4 277,595 - -0.4 277,652 + +0.2 277,667 + -2.0 277,668 - -0.7 277,668 - -0.1 277,681 + -0.1 277,682 - -0.0 277,691 - -1.4 277,691 - -0.8 277,693 + +0.6 277,693 + +0.6 277,694 - +0.4 277,836 + -1.2 277,836 + -0.4 277,837 - -0.0 277,837 - -0.6 277,837 - +0.1 277,837 - -1.1 277,837 - +1.9 277,837 - -0.3 277,837 - +0.2 277,841 + -1.0 277,841 + -0.1 277,841 + +0.0 277,841 + +1.9 277,841 + +0.5 277,841 + +0.1 277,841 + -0.6 277,841 + +1.9 277,841 + -0.8 277,841 + +0.5 277,841 + -0.9 277,841 + +0.6 277,842 - -1.8 277,842 - -1.9 277,842 - +0.6 277,842 - -0.9 277,842 - -1.6 277,842 - +1.0 277,842 - +0.0 277,842 - -1.1 277,842 - +1.6 278,195 + MPMX19_06495 0.27 +0.0 278,195 + MPMX19_06495 0.27 -0.6 278,196 - MPMX19_06495 0.27 -0.1 278,196 - MPMX19_06495 0.27 -0.8 278,270 + MPMX19_06495 0.34 +0.5 278,270 + MPMX19_06495 0.34 +0.3 278,270 + MPMX19_06495 0.34 +0.6 278,270 + MPMX19_06495 0.34 -1.1 278,270 + MPMX19_06495 0.34 +0.4 278,270 + MPMX19_06495 0.34 -0.3 278,270 + MPMX19_06495 0.34 -0.1 278,270 + MPMX19_06495 0.34 -0.1 278,270 + MPMX19_06495 0.34 -0.7 278,270 + MPMX19_06495 0.34 -0.1 278,270 + MPMX19_06495 0.34 +1.6 278,271 - MPMX19_06495 0.34 +0.1 278,271 - MPMX19_06495 0.34 -1.4 278,271 - MPMX19_06495 0.34 +0.9 278,271 - MPMX19_06495 0.34 -1.6 278,271 - MPMX19_06495 0.34 -1.0 278,271 - MPMX19_06495 0.34 -0.1 278,271 - MPMX19_06495 0.34 +1.4 278,271 - MPMX19_06495 0.34 -0.8 278,303 - MPMX19_06495 0.37 +1.3 278,303 - MPMX19_06495 0.37 +0.7 278,303 - MPMX19_06495 0.37 +0.6
Or see this region's nucleotide sequence